Breeding against osteochondrosis : phenotypic and genetic analyses in horses and pigs

Osteochondrosis (OC) is a disturbance in the process of endochondral ossification during skeletal growth. The objectives of this thesis were to assess the prevalence and genetic parameters of OC, and to facilitate optimization of breeding against OC in horses and pigs. In the Dutch warm blood horse, 70% of individuals showed joint abnormalities in at least one of the 28 locations examined. Joint abnormalities were divided into flattened bone contours and bone fragments. Genetic parameters were estimated for flattened bone contours, fragments and overall OC. Heritability was 0.08 for flattened bone contours, 0.22 for fragments, and 0.23 for overall OC. In fattening pigs, the prevalence of OC was 41%, and 12% of the individuals had severe OC. The prevalence was highest for individuals kept on a concrete, partially slatted floor with ad libitum feeding (58%), and lowest for individuals kept on a deep litter floor with restricted feeding (34%). These results demonstrate that the prevalence of OC can be reduced by applying deep litter floors and restricted feeding. The differences in growth patterns between pigs with and without OC were investigated also. After 28 days of age, piglets with severe OC at slaughter started to grow faster, and were significantly heavier after 70 days of age than pigs without OC at slaughter. These results suggest that OC might be related to high growth rates during a specific time period. To evaluate prospects for breeding against OC, selection responses were compared between breeding schemes using phenotypic selection based on own performance or progeny testing and genomic selection. The results show that, when genomic information has an equal accuracy as phenotypic information before selection, it will have a lower equilibrium response to selection because it has a larger Bulmer effect. Especially for low heritable traits, genomic selection was of additional value over traditional selection. The general discussion argues that OC has both economical and practical relevance for the current horse industry. Simulations showed potential for genomic selection compared to the current breeding program in the Dutch warmblood horse (KWPN), even with small reference populations. In pigs, OC is a more serious problem in sows than in fattening pigs, because sows live longer. A decrease in OC prevalence will, therefore, yield larger economic and welfare benefits then apparent from results on fattening pigs. Also for pigs, simulations indicated possibilities for genomic selection. The final section of the general discussion proposes directions for future research.</p

Intrinsic aerobic capacity sets a divide for aging and longevity

&lt;p&gt;&lt;b&gt;Rationale:&lt;/b&gt; Low aerobic exercise capacity is a powerful predictor of premature morbidity and mortality for healthy adults as well as those with cardiovascular disease. For aged populations, poor performance on treadmill or extended walking tests indicates closer proximity to future health declines. Together, these findings suggest a fundamental connection between aerobic capacity and longevity.&lt;/p&gt; &lt;p&gt;&lt;b&gt;Objectives:&lt;/b&gt; Through artificial selective breeding, we developed an animal model system to prospectively test the association between aerobic exercise capacity and survivability (aerobic hypothesis).&lt;/p&gt; &lt;p&gt;&lt;b&gt;Methods and Results:&lt;/b&gt; Laboratory rats of widely diverse genetic backgrounds (N:NIH stock) were selectively bred for low or high intrinsic (inborn) treadmill running capacity. Cohorts of male and female rats from generations 14, 15, and 17 of selection were followed for survivability and assessed for age-related declines in cardiovascular fitness including maximal oxygen uptake (VO&lt;sub&gt;2max&lt;/sub&gt;), myocardial function, endurance performance, and change in body mass. Median lifespan for low exercise capacity rats was 28% to 45% shorter than high capacity rats (hazard ratio, 0.06; P&#60;0.001). VO&lt;sub&gt;2max&lt;/sub&gt;, measured across adulthood was a reliable predictor of lifespan (P&#60;0.001). During progression from adult to old age, left ventricular myocardial and cardiomyocyte morphology, contractility, and intracellular Ca&lt;sup&gt;2+&lt;/sup&gt; handling in both systole and diastole, as well as mean blood pressure, were more compromised in rats bred for low aerobic capacity. Physical activity levels, energy expenditure (Vo&lt;sub&gt;2&lt;/sub&gt;), and lean body mass were all better sustained with age in rats bred for high aerobic capacity.&lt;/p&gt; &lt;p&gt;&lt;b&gt;Conclusions:&lt;/b&gt; These data obtained from a contrasting heterogeneous model system provide strong evidence that genetic segregation for aerobic exercise capacity can be linked with longevity and are useful for deeper mechanistic exploration of aging.&lt;/p&gt

Characteristics of equine summer eczema with emphasis on differences between Finnhorses and Icelandic horses in a 11-year study

Summer eczema, allergic dermatitis of the horse, was studied on 275 affected horses in Finland in 1997–2007. Features of the horses, clinical signs of the disease and owners' opinions of aggravating factors were recorded. Differences, especially, between two of the native Scandinavian horse breeds, the Finnhorse and the Icelandic horse, were evaluated. The study was based on clinical examination and information from the owners. Of the horses, 50% were Finnhorses, 26% Icelandic horses and 24% consisted of different breeds of ponies and other horses. Of the Finnhorses, 76% had summer eczema by the age of 5 years, but in the Icelandic horses born in Finland the average age at onset was 7 years. The vast majority of the horses, 75%, had moderate clinical signs, while 16% showed severe and 9% mild. The severity of clinical signs did not depend on the duration of the disease nor was it related to the age at onset. The only linkage to severity was the breed of the horse or import from Iceland; New Forest ponies and imported Icelandic horses showed severe clinical signs significantly more often than Finnhorses. Of the owners, 38% regarded insects as the only aggravating factor, 24% mentioned several simultaneous factors, including grass fodder and sunlight, while 22% could not specify any. In Finland, a typical horse breed suffering from summer eczema is the Finnhorse and the characteristics of the disease are mainly uniform with the other breeds affected. Equine summer eczema seems to be aggravated by various combinations of environmental factors

Reliability of pedigree-based and genomic evaluations in selected populations

Background: Reliability is an important parameter in breeding. It measures the precision of estimated breeding values (EBV) and, thus, potential response to selection on those EBV. The precision of EBV is commonly measured by relating the prediction error variance (PEV) of EBV to the base population additive genetic variance (base PEV reliability), while the potential for response to selection is commonly measured by the squared correlation between the EBV and breeding values (BV) on selection candidates (reliability of selection). While these two measures are equivalent for unselected populations, they are not equivalent for selected populations. The aim of this study was to quantify the effect of selection on these two measures of reliability and to show how this affects comparison of breeding programs using pedigree-based or genomic evaluations. Methods: Two scenarios with random and best linear unbiased prediction (BLUP) selection were simulated, where the EBV of selection candidates were estimated using only pedigree, pedigree and phenotype, genome-wide marker genotypes and phenotype, or only genome-wide marker genotypes. The base PEV reliabilities of these EBV were compared to the corresponding reliabilities of selection. Realized genetic selection intensity was evaluated to quantify the potential of selection on the different types of EBV and, thus, to validate differences in reliabilities. Finally, the contribution of different underlying processes to changes in additive genetic variance and reliabilities was quantified. Results: The simulations showed that, for selected populations, the base PEV reliability substantially overestimates the reliability of selection of EBV that are mainly based on old information from the parental generation, as is the case with pedigree-based prediction. Selection on such EBV gave very low realized genetic selection intensities, confirming the overestimation and importance of genotyping both male and female selection candidates. The two measures of reliability matched when the reductions in additive genetic variance due to the Bulmer effect, selection, and inbreeding were taken into account. Conclusions: For populations under selection, EBV based on genome-wide information are more valuable than suggested by the comparison of the base PEV reliabilities between the different types of EBV. This implies that genome-wide marker information is undervalued for selected populations and that genotyping un-phenotyped female selection candidates should be reconsidere