Exploring the effect of sex on empirical fitness landscapes

The nature of epistasis has important consequences for the evolutionary significance of sex and recombination. Recent efforts to find negative epistasis as a source of negative linkage disequilibrium and associated long-term advantage to sex have yielded little support. Sign epistasis, where the sign of the fitness effects of alleles varies across genetic backgrounds, is responsible for the ruggedness of the fitness landscape, with several unexplored implications for the evolution of sex. Here, we describe fitness landscapes for two sets of strains of the asexual fungus Aspergillus niger involving all combinations of five mutations. We find that 30% of the single-mutation fitness effects are positive despite their negative effect in the wild-type strain and that several local fitness maxima and minima are present. We then compare adaptation of sexual and asexual populations on these empirical fitness landscapes by using simulations. The results show a general disadvantage of sex on these rugged landscapes, caused by the breakdown by recombination of genotypes on fitness peaks. Sex facilitates movement to the global peak only for some parameter values on one landscape, indicating its dependence on the landscape’s topography. We discuss possible reasons for the discrepancy between our results and the reports of faster adaptation of sexual population

Fourier spectra from exoplanets with polar caps and ocean glint

The weak orbital-phase dependent reflection signal of an exoplanet contains information on the planet surface, such as the distribution of continents and oceans on terrestrial planets. This light curve is usually studied in the time domain, but because the signal from a stationary surface is (quasi)periodic, analysis of the Fourier series may provide an alternative, complementary approach. We study Fourier spectra from reflected light curves for geometrically simple configurations. Depending on its atmospheric properties, a rotating planet in the habitable zone could have circular polar ice caps. Tidally locked planets, on the other hand, may have symmetric circular oceans facing the star. These cases are interesting because the high-albedo contrast at the sharp edges of the ice-sheets and the glint from the host star in the ocean may produce recognizable light curves with orbital periodicity, which could also be interpreted in the Fourier domain. We derive a simple general expression for the Fourier coefficients of a quasiperiodic light curve in terms of the albedo map of a Lambertian planet surface. Analytic expressions for light curves and their spectra are calculated for idealized situations, and dependence of spectral peaks on the key parameters inclination, obliquity, and cap size is studied.Comment: 15 pages, 2 tables, 13 figure

Thermal bulk polymerization of cholesteryl acrylate

The thermal bulk polymerization of cholesteryl acrylate was carried out in the solid phase, the mesomorphic phase, and the liquid phase to study the effect of monomer ordering on polymerization rate and polymer properties. The rate increased with decreasing ordering (or enhanced mobility) of the monomer. Formation of inhibitive by-products during the polymerization limited conversions to 35%. The sedimentation constant S0 = 6.2 S was the same for the polymers obtained in the three phases. The weight-average molecular weight (w) was 480,000 as determined by ultracentrifugation. Poly-(cholesteryl acrylate) formed in bulk is randomly coiled when dissolved in tetrahydrofuran. The thermal properties of the monomer are given

Fluctuations in the electron system of a superconductor exposed to a photon flux

We report on fluctuations in the electron system, Cooper pairs and quasiparticles, of a superconducting aluminium film. The superconductor is exposed to pair-breaking photons (1.54 THz), which are coupled through an antenna. The change in the complex conductivity of the superconductor upon a change in the quasiparticle number is read out by a microwave resonator. A large range in radiation power can be chosen by carefully filtering the radiation from a blackbody source. We identify two regimes. At high radiation power, fluctuations in the electron system caused by the random arrival rate of the photons are resolved, giving a straightforward measure of the optical efficiency (48%). At low radiation power fluctuations are dominated by excess quasiparticles, the number of which is measured through their recombination lifetime

The Aspergillus niger faeB gene encodes a second feruloyl esterase involved in pectin and xylan degradation and is specifically induced in the presence of aromatic compounds

The faeB gene encoding a second feruloyl esterase from Aspergillus niger has been cloned and characterized. It consists of an open reading frame of 1644 bp containing one intron. The gene encodes a protein of 521 amino acids that has sequence similarity to that of an Aspergillus oryzae tannase. However, the encoded enzyme, feruloyl esterase B (FAEB), does not have tannase activity. Comparison of the physical characteristics and substrate specificity of FAEB with those of a cinnamoyl esterase from A. niger [Kroon, Faulds and Williamson (1996) Biotechnol. Appl. Biochem. 23, 255-262] suggests that they are in fact the same enzyme. The expression of faeB is specifically induced in the presence of certain aromatic compounds, but not in the presence of other constituents present in plant-cell-wall polysaccharides such as arabinoxylan or pectin. The expression profile of faeB in the presence of aromatic compounds was compared with the expression of A. niger faeA, encoding feruloyl esterase A (FAEA), and A. niger bphA, the gene encoding a benzoate-p-hydroxylase. All three genes have different subsets of aromatic compounds that induce their expression, indicating the presence of different transcription activating systems in A. niger that respond to aromatic compounds. Comparison of the activity of FAEA and FAEB on sugar-beet pectin and wheat arabinoxylan demonstrated that they are both involved in the degradation of both polysaccharides, but have opposite preferences for these substrates. FAEA is more active than FAEB towards wheat arabinoxylan, whereas FAEB is more active than FAEA towards sugar-beet pectin

Gait and electromyographic analysis of patients recovering after limb-saving surgery

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