Genome-wide sequence analyses of ethnic populations across Russia

The Russian Federation is the largest and one of the most ethnically diverse countries in the world, however no centralized reference database of genetic variation exists to date. Such data are crucial for medical genetics and essential for studying population history. The Genome Russia Project aims at filling this gap by performing whole genome sequencing and analysis of peoples of the Russian Federation. Here we report the characterization of genome-wide variation of 264 healthy adults, including 60 newly sequenced samples. People of Russia carry known and novel genetic variants of adaptive, clinical and functional consequence that in many cases show allele frequency divergence from neighboring populations. Population genetics analyses revealed six phylogeographic partitions among indigenous ethnicities corresponding to their geographic locales. This study presents a characterization of population-specific genomic variation in Russia with results important for medical genetics and for understanding the dynamic population history of the world's largest country

Influence of Magnetic Fields Assisted for Preparation of Ferromagnetic Mono- and Bi-Metallic Co and Co–V SHS Catalysts on Their Activity in Deep Oxidation and Hydrogenation of CO₂

Co–Al and Co–V–Al intermetallics produced by centrifugal self-propagating high-temperature synthesis (SHS) were used as precursors for preparation of catalysts for deep oxidation and hydrogenation of CO2. Leaching in NaOH solution and stabilization with H2O2 solution of precursors were carried out in permanent magnetic field (MF) (0.24 Т) and alternating magnetic field (0.13 Т, 50 Hz). Prepared Co и Co–V (95Co–5V, 90Co–10V) granular catalysts with size of 100–300 µm were characterized by XRD, SEM, EDS, and BET method and revealed to have a scaly surface structure. It was shown that the type of MF affects phase composition and surface morphology, as well as specific surface and activity in deep oxidation of CO and hydrocarbons as an important part of the neutralization of gas emissions, and hydrogenation of CO2, the processing of which would reduce atmospheric pollution with this greenhouse gas. Catalysts obtained in alternating MF was found to possess higher activity in the process of deep oxidation

Automated Testing Algorithm for the Improvement of 1T1R ReRAM Endurance

One of the most attractive types of novel nonvolatile memory concepts is resistive random access memory (ReRAM) based on a reversible (“soft”) dielectric breakdown effect. The interest is caused by combining simple architecture with promising performance: excellent scalability, nanosecond speed, long data retention, and low power consumption. However, the commercialization of this type of memory is retarded mainly due to serious drawbacks: high cell-to-cell variability of switching parameters and limited endurance related to the ionic origin of resistive switching effect coupled with the problem of voltage overshooting. In particular, these issues complicate the examination of test samples because during the lifespan of memory cells, and the permanent reselection of test switching parameters is required. This challenge can be overcome by developing a measurement technique that combines careful testing of every single structure and the ability to test a large number of test structures. As such a technique, we propose an automated testing algorithm that automatically avoids voltage overshooting and provides an effective way of characterization of cell-to-cell and cycle-to-cycle variability. It includes all stages of ReRAM cell operation, specifically electroforming, dc switching, and endurance testing in the pulsed mode. The developed technique allows on-the-fly restoring of the memory window in case of its degradation, making it possible to better understand the potential of the material stacks of the memory cell

Recombination Is Responsible for the Increased Recovery of Drug-Resistant Mutants with Hypermutated Genomes in Resting Yeast Diploids Expressing APOBEC Deaminases

DNA editing deaminases (APOBECs) are implicated in generation of mutations in somatic cells during tumorigenesis. APOBEC-dependent mutagenesis is thought to occur during transient exposure of unprotected single-stranded DNA. Mutations frequently occur in clusters (kataegis). We investigated mechanisms of mutant generation in growing and resting diploid yeast expressing APOBEC from sea lamprey, PmCDA1, whose kataegistic effect was previously shown to be associated with transcription. We have found that the frequency of canavanine-resistant mutants kept raising after growth cessation, while the profile of transcription remained unchanged. Surprisingly, the overall number of mutations in the genomes did not elevate in resting cells. Thus, mutations were accumulated during vigorous growth stage with both intense replication and transcription. We found that the elevated recovery of can1 mutant clones in non-growing cells is the result of loss of heterozygosity (LOH) leading to clusters of homozygous mutations in the chromosomal regions distal to the reporter gene. We confirmed that recombination frequency in resting cells was elevated by orders of magnitude, suggesting that cells were transiently committed to meiotic levels of recombination, a process referred to in yeast genetics as return-to-growth. In its extreme, on day 6 of starvation, a few mutant clones were haploid, likely resulting from completed meiosis. Distribution of mutations along chromosomes indicated that PmCDA1 was active during ongoing recombination events and sometimes produced characteristic kataegis near initial breakpoints. AID and APOBEC1 behaved similar to PmCDA1. We conclude that replication, transcription, and mitotic recombination contribute to the recovered APOBEC-induced mutations in resting diploids. The mechanism is relevant to the initial stages of oncogenic transformation in terminally differentiated cells, when recombination may lead to the LOH exposing recessive mutations induced by APOBECs in cell’s history and to acquisition of new mutations near original break