Observations and geophysical value-added datasets for cold high mountain and polar regions

Peer reviewe

Facet-dependent performance of BiOBr for photocatalytic reduction of Cr(VI)

BiOBr samples with different facets were prepared and used for photocatalytic reduction of hexavalent chromium under visible light. The results reveal that BiOBr dominated with {110} facets giving a specific rate constant 3 times as high as BiOBr with {001} facets, and its much stronger internal electric field was believed to be the main reason

Detecting Illicit Drug Ads in Google+ Using Machine Learning

Opioid abuse epidemics is a major public health emergency in the US. Social media platforms have facilitated illicit drug trading, with significant amount of drug advertisement and selling being carried out online. In order to understand dynamics of drug abuse epidemics and design efficient public health interventions, it is essential to extract and analyze data from online drug markets. In this paper, we present a computational framework for automatic detection of illicit drug ads in social media, with Google+ being used for a proof-of-concept. The proposed SVM- and CNN-based methods have been extensively validated on the large dataset containing millions of posts collected using Google+ API. Experimental results demonstrate that our methods can efficiently identify illicit drug ads with high accuracy. Both approaches have been extensively validated using the dataset containing millions of posts collected using Google+ API. Experimental results demonstrate that both methods allow for accurate identification of illicit drug ads

Comparison of quality/quantity mNGS and usual mNGS for pathogen detection in suspected pulmonary infections

Improved metagenomic next-generation sequencing (mNGS), for example, quality/quantity mNGS (QmNGS), is being used in the diagnosis of pulmonary pathogens. There are differences between QmNGS and the usual mNGS (UmNGS), but reports that compare their detection performances are rare. In this prospective study of patients enrolled between December 2021 and March 2022, the bronchoalveolar lavage fluid of thirty-six patients with suspected pulmonary infection was assessed using UmNGS and QmNGS. The sensitivity of QmNGS was similar to that of UmNGS. The specificity of QmNGS was higher than that of UmNGS; however, the difference was not statistically significant. The positive likelihood ratios (+LR) of QmNGS and UmNGS were 3.956 and 1.394, respectively, and the negative likelihood ratios (-LR) were 0.342 and 0.527, respectively. For the co-detection of pathogens, the depth and coverage of the QmNGS sequencing were lower than those of UmNGS, while for the detection of pathogens isolated from patients with pulmonary infection, the concordance rate was 77.2%. In the eleven patients with nonpulmonary infection, only viruses were detected using QmNGS, while UmNGS detected not only viruses but also bacteria and fungi. This study provides a basis for the selection of mNGS for the diagnosis of suspected pulmonary infection

The performance of metagenomic next-generation sequencing in diagnosing pulmonary infectious diseases using authentic clinical specimens: The Illumina platform versus the Beijing Genomics Institute platform

Introduction: Metagenomic next-generation sequencing (mNGS) has been increasingly used to detect infectious organisms and is rapidly moving from research to clinical laboratories. Presently, mNGS platforms mainly include those from Illumina and the Beijing Genomics Institute (BGI). Previous studies have reported that various sequencing platforms have similar sensitivity in detecting the reference panel that mimics clinical specimens. However, whether the Illumina and BGI platforms provide the same diagnostic performance using authentic clinical samples remains unclear.Methods: In this prospective study, we compared the performance of the Illumina and BGI platforms in detecting pulmonary pathogens. Forty-six patients with suspected pulmonary infection were enrolled in the final analysis. All patients received bronchoscopy, and the specimens collected were sent for mNGS on the two different sequencing platforms.Results: The diagnostic sensitivity of the Illumina and BGI platforms was notably higher than that of conventional examination (76.9% vs. 38.5%, p < 0.001; 82.1% vs. 38.5%, p < 0.001; respectively). The sensitivity and specificity for pulmonary infection diagnosis were not significantly different between the Illumina and BGI platforms. Furthermore, the pathogenic detection rate of the two platforms were not significantly different.Conclusion: The Illumina and BGI platforms exhibited similar diagnostic performance for pulmonary infectious diseases using clinical specimens, and both are superior to conventional examinations

Coexistence of diploid, triploid and tetraploid crucian carp (Carassius auratus) in natural waters

<p>Abstract</p> <p>Background</p> <p>Crucian carp (abbreviated CC) belongs to the genus of <it>Carassius </it>within the family of <it>Cyprinidae</it>. It has been one of the most important freshwater species for Chinese aquaculture and is especially abundant in the Dongting water system of Hunan province. CC used to be considered as all diploid forms. However, coexistence of diploid (abbreviated 2nCC), triploid (abbreviated 3nCC) and tetraploid crucian carp (abbreviated 4nCC) population of the Dongting water system was first found by our recently researches.</p> <p>Results</p> <p>We examined the ploidy level and compared biological characteristics in different ploidy CC. In reproductive mode, 2nCC was bisexual generative and 4nCC generated all-female offspring by gynogenesis. However, 3nCC generated progenies in two different ways. 3nCC produced bisexual triploid offspring fertilized with 3nCC spermatozoa, while it produced all-female triploid offspring by gynogenesis when its ova were activated by heterogenous spermatozoa. The complete mitochondrial DNA of three different ploidy fishes was sequenced and analyzed, suggesting no significant differences. Interestingly, microchromosomes were found only in 3nCC, which were concluded to be the result of hybridization. Allogenetic DNA fragments of Sox genes were obtained in 3nCC and 4nCC, which were absent in 2nCC. Phylogenetics analysis based on Sox4 gene indicated 3nCC and 4nCC formed a separate group from 2nCC.</p> <p>Conclusions</p> <p>In summary, this is the first report of the co-existence of three types of different ploidy crucian carps in natural waters in China. It was proved that the coexistence of different ploidy CC was reproductively maintained. We further hypothesized that 3nCC and 4nCC were allopolyploids that resulted from hybridization. The different ploidy CC population we obtained in this study possesses great significance for the study of polyploidization and the evolution of vertebrates.</p

MELK is an oncogenic kinase essential for mitotic progression in basal-like breast cancer cells

Despite marked advances in breast cancer therapy, basal-like breast cancer (BBC), an aggressive subtype of breast cancer usually lacking estrogen and progesterone receptors, remains difficult to treat. In this study, we report the identification of MELK as a novel oncogenic kinase from an in vivo tumorigenesis screen using a kinome-wide open reading frames (ORFs) library. Analysis of clinical data reveals a high level of MELK overexpression in BBC, a feature that is largely dependent on FoxM1, a master mitotic transcription factor that is also found to be highly overexpressed in BBC. Ablation of MELK selectively impairs proliferation of basal-like, but not luminal breast cancer cells both in vitro and in vivo. Mechanistically, depletion of MELK in BBC cells induces caspase-dependent cell death, preceded by defective mitosis. Finally, we find that Melk is not required for mouse development and physiology. Together, these data indicate that MELK is a normally non-essential kinase, but is critical for BBC and thus represents a promising selective therapeutic target for the most aggressive subtype of breast cancer. DOI: http://dx.doi.org/10.7554/eLife.01763.00

Oxidative dehydrogenation of ethane to ethylene over LiCl/SO42--ZrO2 catalyst

Sulfated zirconia (SO42--ZrO2) samples were prepared by a modified two-step method (refluxing ZrO(OH)(2) precursor in basic solution followed by drying and (NH4)(2)SO4 impregnation) and then impregnated with a LiCl solution to give the SO42--ZrO2-supported LICI catalysts with Li mass content of 0.5% similar to 15%. The catalysts were characterized by X-ray diffraction, scanning electron microscopy, N-2 adsorption, temperature-programmed desorption-mass spectrometry, and X-ray photoelectron spectroscopy. The results show that with increasing LiCl loading, the specific surface area and acidity of the catalysts as well as the volume fraction of tetragonal zirconia in the catalysts decrease, while the catalytic performance of the catalysts for oxidative dehydrogenation of ethane (ODHE) to ethylene increases. Over the LiCl/SO42--ZrO2 catalyst with a Li content of 15% ethylene yield of 77.8% with an ethane conversion of 90.6% is achieved at 650 degrees C, and the yield higher than 71% is maintained over a period of 24 h. The textural structure of ZrO? has little effect on the catalytic behavior of the LiCl/SO42--ZrO2 catalysts. The specific surface area of SO42--ZrO2 samples prepared by the fled two-step method is much bigger than that of the SO42--ZrO2 samples made by the method reported in literature, and therefore more LiCl call be loaded on unit mass of support. This is favorable to improve the catalyst stability and slow down catalyst deactivation during the ODHE reaction due to the loss of LiCl

Industry/University Collaboration at the University of Michigan-Dearborn: A Focus on Relevant Technology

https://deepblue.lib.umich.edu/bitstream/2027.42/154104/1/kampfner1996.pd