1,173 research outputs found
Construction of Personality and Temperament of Chinese Male Homosexuality in the Social Media Environment
Social media is a double-edged sword. It shapes a universal standard, which can be used to encourage or eliminate “beauty” through traffic. With the standard of “beauty”, guiding the public to make efforts towards the standard to generate motivation and behavior. Under the influence of social media, the character and temperament of Chinese male homosexuality mainly tend to be masculine. This paper analyzes the construction of their gender temperament from the visual and psychological perspectives, reflecting the top and bottom in the character and temperament of Chinese male homosexuality. At the same time, it is also found that the introverted temperament is easier to be accepted and welcomed, which is closely related to Chinese traditional culture
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Whole transcriptome sequencing identifies tumor-specific mutations in human oral squamous cell carcinoma
Background: The accumulation of somatic mutations in genes and molecular pathways is a major factor in the evolution of oral squamous cell carcinoma (OSCC), which sparks studies to identify somatic mutations with clinical potentials. Recently, massively parallel sequencing technique has started to revolutionize biomedical studies, due to the rapid increase in its throughput and drop in cost. Hence sequencing of whole transcriptome (RNA-Seq) becomes a superior approach in cancer studies, which enables the detection of somatic mutations and accurate measurement of gene expression simultaneously. Methods: We used RNA-Seq data from tumor and matched normal samples to investigate somatic mutation spectrum in OSCC. Results: By applying a sophisticated bioinformatic pipeline, we interrogated two tumor samples and their matched normal tissues and identified 70,472 tumor somatic mutations in protein-coding regions. We further identified 515 significantly mutated genes (SMGs) and 156 tumor-specific disruptive genes (TDGs), with six genes in both sets, including ANKRA2, GTF2H5, STOML1, NUP37, PPP1R26, and TAF1L. Pathway analysis suggested that SMGs were enriched in cell adhesion pathways, which are frequently indicated in tumor development. We also found that SMGs tend to be differentially expressed between tumors and normal tissues, implying a regulatory role of accumulation of genetic aberrations in these genes. Conclusions: Our finding of known tumor genes proves of the utility of RNA-Seq in mutation screening, and functional analysis of genes detected here would help understand the molecular mechanism of OSCC
Adversarial Purification of Information Masking
Adversarial attacks meticulously generate minuscule, imperceptible
perturbations to images to deceive neural networks. Counteracting these,
adversarial purification methods seek to transform adversarial input samples
into clean output images to defend against adversarial attacks. Nonetheless,
extent generative models fail to effectively eliminate adversarial
perturbations, yielding less-than-ideal purification results. We emphasize the
potential threat of residual adversarial perturbations to target models,
quantitatively establishing a relationship between perturbation scale and
attack capability. Notably, the residual perturbations on the purified image
primarily stem from the same-position patch and similar patches of the
adversarial sample. We propose a novel adversarial purification approach named
Information Mask Purification (IMPure), aims to extensively eliminate
adversarial perturbations. To obtain an adversarial sample, we first mask part
of the patches information, then reconstruct the patches to resist adversarial
perturbations from the patches. We reconstruct all patches in parallel to
obtain a cohesive image. Then, in order to protect the purified samples against
potential similar regional perturbations, we simulate this risk by randomly
mixing the purified samples with the input samples before inputting them into
the feature extraction network. Finally, we establish a combined constraint of
pixel loss and perceptual loss to augment the model's reconstruction
adaptability. Extensive experiments on the ImageNet dataset with three
classifier models demonstrate that our approach achieves state-of-the-art
results against nine adversarial attack methods. Implementation code and
pre-trained weights can be accessed at
\textcolor{blue}{https://github.com/NoWindButRain/IMPure}
An adaptive preconditioning scheme for the self-consistent field iteration and generalized stacking-fault energy calculations
The generalized stacking-fault energy (GSFE) is the fundamental but key
parameter for the plastic deformation of materials. We perform first-principles
calculations by full-potential linearized augmented planewave (FLAPW) method to
evaluate the GSFE based on the single-shift and triple-shift supercell models.
Different degrees of defects are introduced in the two models, thereby
affecting the convergence of the self-consistent field (SCF) iterations. We
present an adaptive preconditioning scheme which can identify the
long-wavelength divergence behavior of the Jacobian during the SCF iteration
and automatically switch on the Kerker preconditioning to accelerate the
convergence. We implement this algorithm in Elk-7.2.42 package and calculate
the GSFE curves for Al, Cu, and Si (111) plane direction. We found that
the single-shift and triple-shift supercell models have equivalent calculation
accuracy and are within the experimental data uncertainty. For computational
efficiency, the triple-shift supercell model is preferable due to its better
convergence, exhibiting lower degree of defect compared to the single-shift
supercell model.Comment: 10 pages, 8 figure
Prediction of the anti-inflammatory effects of bioactive components of a Hippocampus species-based TCM formulation on chronic kidney disease using network pharmacology
Purpose: To systematically study and predict the therapeutic targets and signaling pathways of Hippocampus (HPC) against chronic kidney disease (CKD) using network pharmacology.Methods: By combining database mining, literature searching, screening of disease targets, and network construction, the effects of various components of HPC on several proteins related to CKD were predicted and the active compounds were screened. Genes related to the selected compounds were linked using the SEA database. The correlation between CKD and genes was determined using OMIM, DisGenNet, and GeneCards databases. Pathway-enrichment analyses of overlapping genes were undertaken using online databases.Results: A total of 144 compounds in HPC were identified. Analyses of clusters suggest that the active components of HPC and the target genes against the inflammation caused by CKD were due to 10 compounds and 25 genes. Metascape results showed that these HPC targets are related to CKD inflammation.Conclusion: The active components of HPC and the target genes against CKD inflammation are involved in multiple signaling pathways, such as AGE-RAGE, TLR, TNF, and NF-κB. This work provides scientific evidence to support the clinical use of HPC against CKD
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The global landscape of intron retentions in lung adenocarcinoma
Background: The transcriptome complexity in an organism can be achieved by alternative splicing of precursor messenger RNAs. It has been revealed that alternations in mRNA splicing play an important role in a number of diseases including human cancers. Methods: In this study, we exploited whole transcriptome sequencing data from five lung adenocarcinoma tissues and their matched normal tissues to interrogate intron retention, a less studied alternative splicing form which has profound structural and functional consequence by modifying open reading frame or inserting premature stop codons. Results: Abundant intron retention events were found in both tumor and normal tissues, and 2,340 and 1,422 genes only contain tumor-specific retentions and normal-specific retentions, respectively. Combined with gene expression analysis, we showed that genes with tumor-specific retentions tend to be over-expressed in tumors, and the abundance of intron retention within genes is negatively related with gene expression, indicating the action of nonsense mediated decay. Further functional analysis demonstrated that genes with tumor-specific retentions include known lung cancer driver genes and are found enriched in pathways important in carcinogenesis. Conclusions: We hypothesize that intron retentions and consequent nonsense mediated decay may collectively counteract the over-expression of genes promoting cancer development. Identification of genes with tumor-specific retentions may also help develop targeted therapies
A high-resolution map of reactive nitrogen inputs to China
To feed an increasingly affluent population, reactive nitrogen (Nr) inputs to China’s lands and waters have substantially increased over the past century. Today, China’s Nr emissions account for over one third of global total emissions, leading to serious environmental pollution and health damages. Quantifying the spatial variability of Nr inputs is crucial for the identification of intervention points to mitigate Nr pollution, which, however, is not well known. Here, we present a database describing Nr inputs to China for the year 2017 with a 1 km × 1 km resolution, considering land use and Nr sources, compiled by using the CHANS model. Results show that the North China Plain, the Sichuan Basin and the Middle-Lower Yangtze River Plain are hotspots of Nr inputs, where per hectare Nr input is an order of magnitude higher than that in other regions. Cropland and surface water bodies receive much higher Nr inputs than other land use types. This unique database will provide basic data for research on environmental health and global change modelling
RegionBLIP: A Unified Multi-modal Pre-training Framework for Holistic and Regional Comprehension
In this work, we investigate extending the comprehension of Multi-modal Large
Language Models (MLLMs) to regional objects. To this end, we propose to extract
features corresponding to regional objects as soft prompts for LLM, which
provides a straightforward and scalable approach and eliminates the need for
LLM fine-tuning. To effectively extract regional features from regular image
features and irregular point cloud features, we present a novel and unified
position-assisted feature extraction module. Furthermore, training an MLLM from
scratch is highly time-consuming. Thus, we propose incrementally extending
existing pre-trained MLLMs to comprehend more modalities and the regional
objects of those modalities. Specifically, we freeze the Q-Former from BLIP-2,
an impressive MLLM, and optimize the modality-specific Lora parameters in
Q-Former and LLM for each newly introduced modality. The freezing of the
Q-Former eliminates the need for extensive pre-training on massive image-text
data. The freezed Q-Former pre-trained from massive image-text data is also
beneficial for the pre-training on image-region-text data. We name our
framework RegionBLIP. We pre-train RegionBLIP on image-region-text,
point-cloud-text, and point-cloud-region-text data. Experimental results verify
that \Ours{} can preserve the image comprehension capability of BILP-2 and
further gain a comprehension of the newly introduced point cloud modality and
regional objects. The Data, Code, and Pre-trained models will be available at
https://github.com/mightyzau/RegionBLIP
Ensemble Quadratic Assignment Network for Graph Matching
Graph matching is a commonly used technique in computer vision and pattern
recognition. Recent data-driven approaches have improved the graph matching
accuracy remarkably, whereas some traditional algorithm-based methods are more
robust to feature noises, outlier nodes, and global transformation
(e.g.~rotation). In this paper, we propose a graph neural network (GNN) based
approach to combine the advantages of data-driven and traditional methods. In
the GNN framework, we transform traditional graph-matching solvers as
single-channel GNNs on the association graph and extend the single-channel
architecture to the multi-channel network. The proposed model can be seen as an
ensemble method that fuses multiple algorithms at every iteration. Instead of
averaging the estimates at the end of the ensemble, in our approach, the
independent iterations of the ensembled algorithms exchange their information
after each iteration via a 1x1 channel-wise convolution layer. Experiments show
that our model improves the performance of traditional algorithms
significantly. In addition, we propose a random sampling strategy to reduce the
computational complexity and GPU memory usage, so the model applies to matching
graphs with thousands of nodes. We evaluate the performance of our method on
three tasks: geometric graph matching, semantic feature matching, and few-shot
3D shape classification. The proposed model performs comparably or outperforms
the best existing GNN-based methods.Comment: Accepted by IJCV in 202
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