8 research outputs found
“It’s HIP to be Square!”: The Four Cornerstones of First-Year Writing Retention for a Post-Covid World
With growing numbers of nontraditional students, students of color, and frst-generation students enrolling in colleges and universities, it is imperative to equip FYW instructors with tools to promote student success and retention. To increase retention in a post-COVID era, this panel proposes four “cornerstones” for twoyear and four-year college faculty to adopt in writing classrooms: the use of high-impact practices (HIPS) of course themes, recursive rhetorical practices, inclusive assignment design, and translanguaging. In this session, the presenters will lead participants through activities that highlight how the cornerstones contribute to a sense of student belonging, which afects students’ decisions to continue to enroll at a given institution
nifH Sequences and Nitrogen Fixation in Type I and Type II Methanotrophs
Some methane-oxidizing bacteria (methanotrophs) are known to be capable of expressing nitrogenase and utilizing N(2) as a nitrogen source. However, no sequences are available for nif genes in these strains, and the known nitrogen-fixing methanotrophs are confined mainly to a few genera. The purpose of this work was to assess the nitrogen-fixing capabilities of a variety of methanotroph strains. nifH gene fragments from four type I methanotrophs and seven type II methanotrophs were PCR amplified and sequenced. Nitrogenase activity was confirmed in selected type I and type II strains by acetylene reduction. Activities ranged from 0.4 to 3.3 nmol/min/mg of protein. Sequence analysis shows that the nifH sequences from the type I and type II strains cluster with nifH sequences from other gamma proteobacteria and alpha proteobacteria, respectively. The translated nifH sequences from three Methylomonas strains show high identity (95 to 99%) to several published translated environmental nifH sequences PCR amplified from rice roots and a freshwater lake. The translated nifH sequences from the type II strains show high identity (94 to 99%) to published translated nifH sequences from a variety of environments, including rice roots, a freshwater lake, an oligotrophic ocean, and forest soil. These results provide evidence for nitrogen fixation in a broad range of methanotrophs and suggest that nitrogen-fixing methanotrophs may be widespread and important in the nitrogen cycling of many environments
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Single-taxon field measurements of bacterial gene regulation controlling DMSP fate.
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Single-taxon field measurements of bacterial gene regulation controlling DMSP fate.
The 'bacterial switch' is a proposed regulatory point in the global sulfur cycle that routes dimethylsulfoniopropionate (DMSP) to two fundamentally different fates in seawater through genes encoding either the cleavage or demethylation pathway, and affects the flux of volatile sulfur from ocean surface waters to the atmosphere. Yet which ecological or physiological factors might control the bacterial switch remains a topic of considerable debate. Here we report the first field observations of dynamic changes in expression of DMSP pathway genes by a single marine bacterial species in its natural environment. Detection of taxon-specific gene expression in Roseobacter species HTCC2255 during a month-long deployment of an autonomous ocean sensor in Monterey Bay, CA captured in situ regulation of the first gene in each DMSP pathway (dddP and dmdA) that corresponded with shifts in the taxonomy of the phytoplankton community. Expression of the demethylation pathway was relatively greater during a high-DMSP-producing dinoflagellate bloom, and expression of the cleavage pathway was greater in the presence of a mixed diatom and dinoflagellate community [corrected].These field data fit the prevailing hypothesis for bacterial DMSP gene regulation based on bacterial sulfur demand, but also suggest a modification involving oxidative stress response, evidenced as upregulation of catalase via katG, when DMSP is demethylated
Corrigendum: Single-taxon field measurements of bacterial gene regulation controlling DMSP fate. Correction to: The ISME Journal (2015) 1677–1686
A wording error in a sentence in the abstract misrepresented a main finding of the research. The sentence should read:
Expression of the demethylation pathway was relatively greater during a high-DMSP-producing dinoflagellate bloom, and expression of the cleavage pathway was greater in the presence of a mixed diatom and dinoflagellate community.
The sentence has now been corrected.
The supplementary file published with the paper was missing figure legends. The correct file is now provided