282 research outputs found

    1-Acetyl-5-isobutyl-2-sulfanylidene­imidazolidin-4-one

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    There are two independent mol­ecules in the asymmetric unit of the title compound, C9H14N2O2S. In the crystal, the mol­ecules are linked by N—H⋯O hydrogen bonds, forming a chain along the a axis

    A consensus linkage map of the grass carp (Ctenopharyngodon idella) based on microsatellites and SNPs

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    <p>Abstract</p> <p>Background</p> <p>Grass carp (<it>Ctenopharyngodon idella</it>) belongs to the family Cyprinidae which includes more than 2000 fish species. It is one of the most important freshwater food fish species in world aquaculture. A linkage map is an essential framework for mapping traits of interest and is often the first step towards understanding genome evolution. The aim of this study is to construct a first generation genetic map of grass carp using microsatellites and SNPs to generate a new resource for mapping QTL for economically important traits and to conduct a comparative mapping analysis to shed new insights into the evolution of fish genomes.</p> <p>Results</p> <p>We constructed a first generation linkage map of grass carp with a mapping panel containing two F1 families including 192 progenies. Sixteen SNPs in genes and 263 microsatellite markers were mapped to twenty-four linkage groups (LGs). The number of LGs was corresponding to the haploid chromosome number of grass carp. The sex-specific map was 1149.4 and 888.8 cM long in females and males respectively whereas the sex-averaged map spanned 1176.1 cM. The average resolution of the map was 4.2 cM/locus. BLAST searches of sequences of mapped markers of grass carp against the whole genome sequence of zebrafish revealed substantial macrosynteny relationship and extensive colinearity of markers between grass carp and zebrafish.</p> <p>Conclusions</p> <p>The linkage map of grass carp presented here is the first linkage map of a food fish species based on co-dominant markers in the family Cyprinidae. This map provides a valuable resource for mapping phenotypic variations and serves as a reference to approach comparative genomics and understand the evolution of fish genomes and could be complementary to grass carp genome sequencing project.</p

    Construction of a BAC library and mapping BAC clones to the linkage map of Barramundi, Lates calcarifer

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    <p>Abstract</p> <p>Background</p> <p>Barramundi (<it>Lates calcarifer</it>) is an important farmed marine food fish species. Its first generation linkage map has been applied to map QTL for growth traits. To identify genes located in QTL responsible for specific traits, genomic large insert libraries are of crucial importance. We reported herein a bacterial artificial chromosome (BAC) library and the mapping of BAC clones to the linkage map.</p> <p>Results</p> <p>This BAC library consisted of 49,152 clones with an average insert size of 98 kb, representing 6.9-fold haploid genome coverage. Screening the library with 24 microsatellites and 15 ESTs/genes demonstrated that the library had good genome coverage. In addition, 62 novel microsatellites each isolated from 62 BAC clones were mapped onto the first generation linkage map. A total of 86 BAC clones were anchored on the linkage map with at least one BAC clone on each linkage group.</p> <p>Conclusion</p> <p>We have constructed the first BAC library for <it>L. calcarifer </it>and mapped 86 BAC clones to the first generation linkage map. This BAC library and the improved linkage map with 302 DNA markers not only supply an indispensable tool to the integration of physical and linkage maps, the fine mapping of QTL and map based cloning genes located in QTL of commercial importance, but also contribute to comparative genomic studies and eventually whole genome sequencing.</p

    3-Methyl­sulfanyl-5-phenyl-4H-1,2,4-triazol-4-amine–water (6/1)

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    In the title compound, 6C9H10N4S·H2O, the dihedral angle between the five-membered triazole ring and the phenyl ring is 44.33 (16)°. The solvent water molecule is disordered about a special position with symmetry and its occupancy cannot be greater than 0.1667. The crystal structure is stabilized by inter­molecular N—H⋯N and C–H⋯N hydrogen bonds

    Electrospun PEDOT:PSS/PVP Nanofibers for CO Gas Sensing with Quartz Crystal Microbalance Technique

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    Poly(3,4-ethylenedioxythiophene):poly(styrenesulfonate)/polyvinylpyrrolidone (PEDOT:PSS/PVP) composite nanofibers were successfully fabricated via electrospinning and used as a quartz crystal microbalance (QCM) sensor for detecting CO gas. The electrical property of individual PEDOT:PSS/PVP nanofibers was characterized and the room temperature resistivity was at the magnitude of 105 Ω·m. The QCM sensor based on PEDOT:PSS/PVP nanofibers was sensitive to low concentration (5–50 ppm) CO. In the range of 5–50 ppm CO, the relationship between the response of PEDOT:PSS nanofibers and the CO concentration was linear. Nevertheless, when the concentration exceeded 50 ppm, the adsorption of the nanofiber membrane for CO gas reached saturation and the resonant frequency range had no change. Therefore, the results open an approach to create electrospun PEDOT:PSS/PVP for gas sensing applications

    Liquefaction structures induced by the M5.7 earthquake on May 28, 2018 in Songyuan, Jilin Province, NE China and research implication

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    Acknowledgements Many thanks to Yang Wang, Wei Chen and Dong-Hao Peng from Jilin Oilfield for their help in the field investigation. We thank Dr. Lv Wang from Monash University and Dr. Gail Maxwell from the University of Aberdeen for their valuable advice on sedimentology, and we also thank Dr. Gui-Dong Ping and Dr. Zhao-Han Xie for the discussion we had about the regional tectonic stress field. We are grateful to Professor Zeng-Zhao Feng, editors and two anonymous reviewers for their editorial work and many constructive comments and suggestions that greatly improved this manuscript. Funding This study is supported by the “Natural Science Foundation of Heilongjiang Province (No. JJ2016ZR0573)”, “Youth Foundation of Northeast Petroleum University (No. NEPUBS201503)”, “Northeast Petroleum University Scientific Research Start-up Fund”, “Shandong Provincial Key Laboratory of Depositional Mineralization and Mineral Foundation (No. DMSMZO17009)”, and “Natural Science Foundation of Shandong Province (No. ZR2016DB15)”. Authors’ contributions ZFS applied for the funding, performed the research, analyzed the data, compiled a few figures and wrote the manuscript. JHZ designed the work, took part in the field trip and interpreted the data. JH interpreted part of the data and revised the manuscript. BH took part in the field trip, collected data and compiled Fig. 5. XWL interpreted part of the data and revised the manuscript. ZXL collected papers and completed some figures. WMR collected some data and compiled Fig. 2. YFZ, HQY, and JLL interpreted some of the data. LTN and GXS took part in fieldwork and collected data. JJL, WXZ and BZ interpreted some data and compiled some figures. All authors approved the final manuscript. Availability of data and materials All data generated or analyzed during this study are included in this published article. Additional data related to this paper can be requested from the corresponding author.Peer reviewedPublisher PD

    Epidermal stem cells (ESCs) accelerate diabetic wound healing via the Notch signalling pathway

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    Synopsis Chronic, non-healing wounds are a major complication of diabetes. Recently, various cell therapies have been reported for promotion of diabetic wound healing. Epidermal stem cells (ESCs) are considered a powerful tool for tissue therapy. However, the effect and the mechanism of the therapeutic properties of ESCs in the diabetic wound healing are unclear. Herein, to determine the ability of ESCs to diabetic wound healing, a dorsal skin defect in a streptozotocin (STZ)-induced diabetes mellitus (DM) mouse model was used. ESCs were isolated from mouse skin. We found that both the mRNA and protein levels of a Notch ligand Jagged1 (Jag1), Notch1 and Notch target gene Hairy Enhancer of Split-1 (Hes1) were significantly increased at the wound margins. In addition, we observed that Jag1 was high expressed in ESCs. Overexpression of Jag1 promotes ESCs migration, whereas knockdown Jag1 resulted in a significant reduction in ESCs migration in vitro. Importantly, Jag1 overexpression improves diabetic wound healing in vivo. These results provide evidence that ESCs accelerate diabetic wound healing via the Notch signalling pathway, and provide a promising potential for activation of the Notch pathway for the treatment of diabetic wound
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