Discovery of 21cm absorption in a zabs=2.289z_{\rm abs} =2.289 DLA towards TXS 0311+430: The first low spin temperature absorber at z > 1

We report the detection of HI 21 cm absorption from the $z=2.289$ damped Lyman-$\alpha$ system (DLA) towards TXS 0311+430, with the Green Bank Telescope. The 21 cm absorption has a velocity spread (between nulls) of $\sim 110$ km s$^{-1}$ and an integrated optical depth of $\int \tau {\rm d}V = (0.818 \pm 0.085)$ km s$^{-1}$. We also present new Giant Metrewave Radio Telescope 602 MHz imaging of the radio continuum. TXS 0311+430 is unresolved at this frequency, indicating that the covering factor of the DLA is likely to be high. Combining the integrated optical depth with the DLA HI column density of \nhi = $(2 \pm 0.5) \times 10^{20}$ \cm, yields a spin temperature of $T_s = (138 \pm 36)$ K, assuming a covering factor of unity. This is the first case of a low spin temperature ($1$ DLA and is among the lowest ever measured in any DLA. Indeed, the $T_s$ measured for this DLA is similar to values measured in the Milky Way and local disk galaxies. We also determine a lower limit (Si/H) $\gtrsim 1/3$ solar for the DLA metallicity, amongst the highest abundances measured in DLAs at any redshift. Based on low redshift correlations, the low $T_s$, large 21 cm absorption width and high metallicity all suggest that the $z \sim 2.289$ DLA is likely to arise in a massive, luminous disk galaxy.Comment: 5 pages, 3 figures. Accepted for publication in MNRAS (Letters

Discovery of a Metal-Line Absorber Associated with a Local Dwarf Starburst Galaxy

We present optical and near-infrared images, H I 21 cm emission maps, optical spectroscopy, and Hubble Space Telescope/Space Telescope Imaging Spectrograph ultraviolet spectroscopy of the QSO/galaxy pair SBS 1122+594/IC 691. The QSO sight line lies at a position angle of 27 degrees from the minor axis of the nearby dwarf starburst galaxy IC 691 (cz_gal = 1204+-3 km/s, L_B ~ 0.09 L*, current star formation rate = 0.08-0.24 solar masses per year) and 33 kpc (6.6 arcmin) from its nucleus. We find that IC 691 has an H I mass of M_HI = (3.6+-0.1) x 10^8 solar masses and a dynamical mass of M_dyn = (3.1+-0.5) x 10^10 solar masses. The UV spectrum of SBS 1122+594 shows a metal-line (Ly-alpha + C IV) absorber near the redshift of IC 691 at cz_abs = 1110+-30 km/s. Since IC 691 is a dwarf starburst and the SBS 1122+594 sight line lies in the expected location for an outflowing wind, we propose that the best model for producing this metal-line absorber is a starburst wind from IC 691. We place consistent metallicity limits on IC 691 ([Z/Zsun] ~ -0.7) and the metal-line absorber ([Z/Zsun] < -0.3). We also find that the galaxy's escape velocity at the absorber location is v_esc = 80+-10 km/s and derive a wind velocity of v_w = 160+-50 km/s. Thus, the evidence suggests that IC 691 produces an unbound starburst wind that escapes from its gravitational potential to transport metals and energy to the surrounding intergalactic medium.Comment: 31 pages, 8 figures; AJ in press; a version with high resolution figures can be downloaded from http://casa.colorado.edu/~keeney/research/papers/IC691.pd

Diffuse Interstellar Bands in z < 0.6 CaII Absorbers

The diffuse interstellar bands (DIBs) probably arise from complex organic molecules whose strength in local galaxies correlates with neutral hydrogen column density, N(HI), and dust reddening, E(B-V). Since CaII absorbers in quasar (QSO) spectra are posited to have high N(HI) and significant E(B-V), they represent promising sites for the detection of DIBs at cosmological distances. Here we present the results from the first search for DIBs in 9 CaII-selected absorbers at 0.07 < z_abs < 0.55. We detect the 5780Ang DIB in one line of sight at z_abs = 0.1556; this is only the second QSO absorber in which a DIB has been detected. Unlike the majority of local DIB sight-lines, both QSO absorbers with detected DIBs show weak 6284Ang absorption compared with the 5780Ang band. This may be indicative of different physical conditions in intermediate redshift QSO absorbers compared with local galaxies. Assuming that local relations between the 5780Ang DIB strength and N(HI) and E(B-V) apply in QSO absorbers, DIB detections and limits can be used to derive N(HI) and E(B-V). For the one absorber in this study with a detected DIB, we derive E(B-V) = 0.23mag and log[N(HI)] >= 20.9, consistent with previous conclusions that CaII systems have high HI column densities and significant reddening. For the remaining 8 CaII-selected absorbers with 5780Ang DIB non-detections, we derive E(B-V) upper limits of 0.1-0.3mag.Comment: 5 pages, 2 figures. Accepted to MNRAS Letter

A Search For Organic Molecules in Intermediate Redshift DLAs

There has been a renewed interest in searching for diffuse interstellar bands (DIBs) due to their probable connection to organic molecules and, thus, their possible link to life in the Universe. Our group is undertaking an extensive search for DIBs in DLAs via QSO absorption-line systems. Six of our DLA targets are presented here. Our equivalent width (EW) limits for the 5780 DIB line strongly suggests that DIB abundance is below the Milky Way expected value or that metallicity plays a large role in DIB strengths.Comment: 3 pages; 2 figures; presented at IAU 199; Probing Galaxies through Quasar Absorption Line

12-h clock regulation of genetic information flow by XBP1s

© The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Pan, Y., Ballance, H., Meng, H., Gonzalez, N., Kim, S., Abdurehman, L., York, B., Chen, X., Schnytzer, Y., Levy, O., Dacso, C. C., McClung, C. A., O'Malley, B. W., Liu, S., & Zhu, B. 12-h clock regulation of genetic information flow by XBP1s. Plos Biology, 18(1), (2020): e3000580, doi:10.1371/journal.pbio.3000580.Our group recently characterized a cell-autonomous mammalian 12-h clock independent from the circadian clock, but its function and mechanism of regulation remain poorly understood. Here, we show that in mouse liver, transcriptional regulation significantly contributes to the establishment of 12-h rhythms of mRNA expression in a manner dependent on Spliced Form of X-box Binding Protein 1 (XBP1s). Mechanistically, the motif stringency of XBP1s promoter binding sites dictates XBP1s’s ability to drive 12-h rhythms of nascent mRNA transcription at dawn and dusk, which are enriched for basal transcription regulation, mRNA processing and export, ribosome biogenesis, translation initiation, and protein processing/sorting in the Endoplasmic Reticulum (ER)-Golgi in a temporal order consistent with the progressive molecular processing sequence described by the central dogma information flow (CEDIF). We further identified GA-binding proteins (GABPs) as putative novel transcriptional regulators driving 12-h rhythms of gene expression with more diverse phases. These 12-h rhythms of gene expression are cell autonomous and evolutionarily conserved in marine animals possessing a circatidal clock. Our results demonstrate an evolutionarily conserved, intricate network of transcriptional control of the mammalian 12-h clock that mediates diverse biological pathways. We speculate that the 12-h clock is coopted to accommodate elevated gene expression and processing in mammals at the two rush hours, with the particular genes processed at each rush hour regulated by the circadian and/or tissue-specific pathways.This study was supported by the American Diabetes Association junior faculty development award 1-18-JDF-025 to B.Z., by funding from National Institute of Health HD07879 and 1P01DK113954 to B.W.O, by funding from National Science Foundation award 1703170 to C.C.D. and B.Z., and by funding from Brockman Foundation to C.C.D and B.W.O. This work was further supported by the UPMC Genome Center with funding from UPMC’s Immunotherapy and Transplant Center. This research was supported in part by the University of Pittsburgh Center for Research Computing through the resources provided. Research reported in this publication was further supported by the National Institute of Diabetes And Digestive And Kidney Diseases of the National Institutes of Health under award number P30DK120531 to Pittsburgh Liver Research Center, in which both S.L. and B.Z. are members. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript

The Angular Clustering of Galaxy Pairs

We identify close pairs of galaxies from 278 deg^2 of Sloan Digital Sky Survey commissioning imaging data. The pairs are drawn from a sample of 330,041 galaxies with 18 < r^* < 20. We determine the angular correlation function of galaxy pairs, and find it to be stronger than the correlation function of single galaxies by a factor of 2.9 +/- 0.4. The two correlation functions have the same logarithmic slope of 0.77. We invert Limber's equation to estimate the three-dimensional correlation functions; we find clustering lengths of r_0= 4.2 +/- 0.4 h^{-1} Mpc for galaxies and 7.8 +/- 0.7 h^{-1} Mpc for galaxy pairs. These results agree well with the global richness dependence of the correlation functions of galaxy systems.Comment: 12 pages. ApJ, in pres

The Arecibo Legacy Fast ALFA Survey: VI. Second HI Source Catalog of the Virgo Cluster Region

We present the third installment of HI sources extracted from the Arecibo Legacy Fast ALFA extragalactic survey. This dataset continues the work of the Virgo ALFALFA catalog. The catalogs and spectra published here consist of data obtained during the 2005 and 2006 observing sessions of the survey. The catalog consists of 578 HI detections within the range 11h 36m < R.A.(J2000) < 13h 52m and +08 deg < Dec.(J2000) < +12 deg, and cz_sun < 18000 km/s. The catalog entries are identified with optical counterparts where possible through the examination of digitized optical images. The catalog detections can be classified into three categories: (a) detections of high reliability with S/N > 6.5; (b) high velocity clouds in the Milky Way or its periphery; and (c) signals of lower S/N which coincide spatially with an optical object and known redshift. 75% of the sources are newly published HI detections. Of particular note is a complex of HI clouds projected between M87 and M49 that do not coincide with any optical counterparts. Candidate objects without optical counterparts are few. The median redshift for this sample is 6500 km/s and the cz distribution exhibits the local large scale structure consisting of Virgo and the background void and the A1367-Coma supercluster regime at cz_sun ~7000 km/s. Position corrections for telescope pointing errors are applied to the dataset by comparing ALFALFA continuum centroid with those cataloged in the NRAO VLA Sky Survey. The uncorrected positional accuracy averages 27 arcsec ~(21 arcsec ~median) for all sources with S/N > 6.5 and is of order ~21 arcsec ~(16 arcsec ~median) for signals with S/N > 12. Uncertainties in distances toward the Virgo cluster can affect the calculated HI mass distribution.Comment: 25 pages, 1 Table, 8 figures, Accepted by the Astronomical Journa