Closed-Loop Magnetic Manipulation for Robotic Transesophageal Echocardiography

This paper presents a closed-loop magnetic manipulation framework for robotic transesophageal echocardiography (TEE) acquisitions. Different from previous work on intracorporeal robotic ultrasound acquisitions that focus on continuum robot control, we first investigate the use of magnetic control methods for more direct, intuitive, and accurate manipulation of the distal tip of the probe. We modify a standard TEE probe by attaching a permanent magnet and an inertial measurement unit sensor to the probe tip and replacing the flexible gastroscope with a soft tether containing only wires for transmitting ultrasound signals, and show that 6-DOF localization and 5-DOF closed-loop control of the probe can be achieved with an external permanent magnet based on the fusion of internal inertial measurement and external magnetic field sensing data. The proposed method does not require complex structures or motions of the actuator and the probe compared with existing magnetic manipulation methods. We have conducted extensive experiments to validate the effectiveness of the framework in terms of localization accuracy, update rate, workspace size, and tracking accuracy. In addition, our results obtained on a realistic cardiac tissue-mimicking phantom show that the proposed framework is applicable in real conditions and can generally meet the requirements for tele-operated TEE acquisitions.Comment: Accepted by IEEE Transactions on Robotics. Copyright may be transferred without notice, after which this version may no longer be accessibl

Self-patterning Gd nano-fibers in Mg-Gd alloys

Manipulating the shape and distribution of strengthening units, e.g. particles, fibers, and precipitates, in a bulk metal, has been a widely applied strategy of tailoring their mechanical properties. Here, we report self-assembled patterns of Gd nano-fibers in Mg-Gd alloys for the purpose of improving their strength and deformability. 1-nm Gd nano-fibers, with a 〈c〉-rod shape, are formed and hexagonally patterned in association with Gd segregations along dislocations that nucleated during hot extrusion. Such Gd-fiber patterns are able to regulate the relative activities of slips and twinning, as a result, overcome the inherent limitations in strength and ductility of Mg alloys. This nano-fiber patterning approach could be an effective method to engineer hexagonal metals

On the special oxidation mechanism of a Mg-Y-Al alloy contained LPSO phase at high temperatures

This work investigated the oxidation of Mg-11Y-1Al alloy in Ar-20%O2 at 500{\deg}through multiscale characterization. The results show that the network-like long-period stacking ordered(LPSO) phase decomposed into a needle-like LPSO phase and a polygonal Mg24Y5 phase. The needle-like LPSO phase resulted in the formation of a high-dense of needle-like oxide at the oxidation front of the area initially occupied by the network-like LPSO phase. The further inward oxygen would diffuse along the needle-like oxide-matrix interfaces and react with Y in the surrounding Mg matrix, resulting in the lateral growth of these needle-like oxides. Finally, the discrete needle-like oxides were interconnected to form a thicker and continuous oxide scale which could be more effective in hindering the elemental diffusion. Meanwhile, Al could partially enter the Y2O3 oxide scale and formed a strengthened (Y,Al)O oxide scale which could show a greater resistance to cracking and debonding

Salinity appears to be the main factor shaping spatial COI diversity of Corbicula lineages within the Chinese Yangtze River Basin

info:eu-repo/semantics/publishe

Lack of an association of miR-938 SNP in IDDM10 with human type 1 diabetes

MicroRNAs (miRNAs) are a newly discovered type of small non-protein coding RNA that function in the inhibition of effective mRNA translation, and may serve as susceptibility genes for various disease developments. The SNP rs12416605, located in human type 1 diabetes IDDM10 locus, changes the seeding sequence (UGU[G/A]CCC) of miRNA miR-938 and potentially alters miR-938 targets, including IL-16 and IL-17A. In an attempt to test whether miR-938 may be a susceptibility gene for IDDM10, we assessed the possible association of the miR-938 SNP with T1D in an American Caucasian cohort of 622 patients and 723 healthy controls by TaqMan assay. Our current data do not support the association between the SNP in miR-938 and type 1 diabetes

Ksak: A high-throughput tool for alignment-free phylogenetics

Phylogenetic tools are fundamental to the studies of evolutionary relationships. In this paper, we present Ksak, a novel high-throughput tool for alignment-free phylogenetic analysis. Ksak computes the pairwise distance matrix between molecular sequences, using seven widely accepted k-mer based distance measures. Based on the distance matrix, Ksak constructs the phylogenetic tree with standard algorithms. When benchmarked with a golden standard 16S rRNA dataset, Ksak was found to be the most accurate tool among all five tools compared and was 19% more accurate than ClustalW2, a high-accuracy multiple sequence aligner. Above all, Ksak was tens to hundreds of times faster than ClustalW2, which helps eliminate the computation limit currently encountered in large-scale multiple sequence alignment. Ksak is freely available at https://github.com/labxscut/ksak

Unveiling precipitation behavior in Mg-Y based alloys

Mg-Y based alloys exhibit a promising combination of strength and deformability through tuning precipitation and solute strengthening mechanisms and tailoring the activity of non-basal dislocations. Understanding the precipitation sequence of Mg-Y based alloys and its dependence on Yttrium concentration in the matrix will provide a guideline for fine tuning structure, morphology and distribution of precipitates in Mg-Y based alloys. In this paper, we explore the precipitation behaviors of Mg-11Y (wt%) and Mg-11Y-1Al (wt%) alloys using aberration-corrected scanning transmission electron microscopy, and rationalize the experimental observations based on first-principles density functional theory calculations. The precipitation sequence during ageing at 225 °C is identified to be SSSS → clusters/G.P. Zones →β′ (Mg7Y) → β′′/βt′′ (Mg3Y). A novel βt′′ phase forms through in-situ transformation from the β′ phase, which shares the same Mg3Y composition with D019-β′′ phase and exhibits the same cbco-structure as β′ phase in Mg-Y based alloys

Zyxin Inhibits the Epithelial-Mesenchymal Transition Process in Gastric Cancer by Upregulating SIRT1

Tumor development relies on the stemness of cancer stem cells, which is regulated by environmental cues. Previous studies have shown that zyxin can inhibit the expression of genes for embryonic stem cell status. In the present study, the expression levels of zyxin protein in cancer tissues and adjacent noncancerous tissues from 73 gastric cancer patients with different clinical stages were analyzed by Western blot. We showed that the relative expression levels of zyxin in gastric cancer tissues (cancer tissues/adjacent tissues) were significantly downregulated in advanced clinical stages. Overexpression of zyxin inhibited the stemness and epithelial-mesenchymal transition (EMT) processes in gastric cancer cells. Zyxin also inhibited the proliferation, migration, and invasion but increased the sensitivity of cancer cells to drugs. Overexpression of zyxin in MKN45 cells inhibited tumor growth in nude mice. We show that the interactions between zyxin and SIRT1 led to the upregulation of SIRT1, reduced acetylation levels of histone H3 K9 and K23, decreased transcription levels of SNAI 1/2, and inhibition of the EMT process. This study demonstrated that zyxin negatively regulates the progression of gastric cancer by inhibiting the stemness of cancer stem cells and EMT. Our findings shed new light on the pathogenesis of gastric cancer

Geochemical characteristics and hydrocarbon potential of source rocks of the Upper Permian Linxi Formation in the Kundu-Taohaiyingzi area, NE China

The extremely thick dark mudstone of the Permian Linxi Formation in the Kundu-Taohaiyingzi area of northeastern China is a promising potential area for shale gas prospecting in the periphery of the Songliao Basin. This study involved a geological field survey, outcrop sample collection, and comprehensive geochemical analysis to conduct an in-depth analysis of the organic matter enrichment and hydrocarbon generation potential of the dark mudstone of the target zone, using organic petrology and organic geochemistry. The results show that the thermal maturity of the dark mudstone of the Linxi Formation is in the mature to high-mature stage. The organic matter is dominated by type II kerogen and supplemented by type III kerogen, and the average total organic carbon content is 0.76%, classifying it as a medium-good source rock. The main peak of carbon numbers is primarily distributed between nC17 and nC19, with a smaller amount at nC21. The distribution of n-alkanes follows a pre-peak pattern characterized by medium and low carbon numbers, suggesting that the organic matter originates from aquatic plants, bacteria, and algae. Combined with the fact that the ratios of pristine and phytane (Pr/Ph) are mainly distributed in the range of 0.99â1.33, the sedimentary environment is a weakly reduced to weakly oxidized lacustrine bay. The systematic analysis of the source rocks of the Upper Permian Linxi Formation in the Kundu-Taohaiyingzi area indicates favorable prospects for shale gas exploration. Utilizing a comprehensive superposition method of geological information, this article identified the Yamen GachaâSaihan Tala area as a potential area for shale gas exploration

Multiple Brucella melitensis lineages are driving the human brucellosis epidemic in Shaanxi Province, China: evidence from whole genome sequencing-based analysis

IntroductionHuman brucellosis is a severe public concern in Shaanxi Province, China, and investigating the epidemiological relationship and transmission pattern of B. melitensis is necessary to devise control strategies.MethodsIn this study, a conventional bio-typing approach and whole genome sequencing of single-nucleotide polymorphisms (SNPs) were employed to identify 189 strains.ResultsBased on the conventional bio-typing, 189 Brucella strains were identified as B. melitensis, of which 14 were in bv. 1, 145 were in bv. 3, and 30 were variant, and the Brucella strains were distributed in all ten cities in Shaanxi Province. SNP analysis was used to identify genetic variation in 189 B. melitensis genomes, and maximum-likelihood was used to generate a phylogeny that identified two clades (A and B) and 19 sequence types (STs). The two clades were highly diverse and exclusively of Eastern Mediterranean origin. Clade B contained 18 STs (2-19), with most isolates originating from a broad swath, implying that multiple B. melitensis lineages circulated in Shaanxi. The 19 STs were composed of 3 to 46 strains isolated from different counties and years, suggesting that multiple cross-county brucellosis outbreak events are driven by multiple B. melitensis lineages. Global phylogenetic analysis revealed that clade A was close to GTIIb, and clade B was placed in the GTIIh lineage, expanding the known diversity of B. melitensis from China.ConclusionThe human brucellosis epidemic in Shaanxi is driven by multiple indigenous circulating B. melitensis lineages, the knowledge of which will contribute to devising a control strategy and providing the foundation for a comprehensive regional phylogeny of this important zoonotic pathogen