Decrosslinking enables visualization of RNA-guided endonuclease-in situ labeling signals for DNA sequences in plant tissues

Information about the positioning of individual loci in the nucleus and the status of epigenetic modifications at these loci in each cell contained in plant tissue increases our understanding of how cells in a tissue coordinate gene expression. To obtain such information, a less damaging method of visualizing DNA in tissue that can be used with immunohistochemistry is required. Recently, a less damaging DNA visualization method using the CRISPR/Cas9 (clustered regularly interspaced short palindromic repeats/associated caspase 9) system, named RNA-guided endonuclease-in situ labeling (RGEN-ISL), was reported. This system made it possible to visualize a target DNA locus in a nucleus fixed on a glass slide with a set of simple operations, but it could not be applied to cells in plant tissues. In this work, we have developed a modified RGEN-ISL method with decrosslinking that made it possible to simultaneously detect the DNA loci and immunohistochemistry signals, including histone modification, in various types of plant tissues and species

Unconventional charge density wave in the organic conductor alpha-(BEDT-TTF)_2KHg(SCN)_4

The low temperature phase (LTP) of alpha-(BEDT-TTF)_2KHg(SCN)_4 salt is known for its surprising angular dependent magnetoresistance (ADMR), which has been studied intensively in the last decade. However, the nature of the LTP has not been understood until now. Here we analyse theoretically ADMR in unconventional (or nodal) charge density wave (UCDW). In magnetic field the quasiparticle spectrum in UCDW is quantized, which gives rise to spectacular ADMR. The present model accounts for many striking features of ADMR data in alpha-(BEDT-TTF)_2KHg(SCN)_4.Comment: 5 pages, 6 figure

Low-temperature specific heat for ferromagnetic and antiferromagnetic orders in CaRu1-xMnxO3

Low-temperature specific heat of CaRu1-xMnxO3 was measured to clarify the role of d electrons in ferromagnetic and antiferromagnetic orders observed above x=0.2. Specific heat divided by temperature C_p/T is found to roughly follow a T^2 function, and relatively large magnitudes of electronic specific heat coefficient gamma were obtained in wide x range. In particular, gamma is unchanged from the value at x=0 (84 mJ/K^2 mol) in the paramagnetic state for x<=0.1, but linearly reduced with increasing x above x= 0.2. These features of gamma strongly suggest that itinerant d electrons are tightly coupled with the evolution of magnetic orders in small and intermediate Mn concentrations.Comment: 4 pages, 2 figures, to be published in J. Phys.: Conf. Ser. (SCES 2011, Cambridge, UK

A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain

Arsenic (As) is a chronic poison that causes severe skin lesions and cancer. Rice (Oryza sativa L.) is a major dietary source of As; therefore, reducing As accumulation in the rice grain and thereby diminishing the amount of As that enters the food chain is of critical importance. Here, we report that a member of the Oryza sativa C-type ATP-binding cassette (ABC) transporter (OsABCC) family, OsABCC1, is involved in the detoxification and reduction of As in rice grains. We found that OsABCC1 was expressed in many organs, including the roots, leaves, nodes, peduncle, and rachis. Expression was not affected when plants were exposed to low levels of As but was up-regulated in response to high levels of As. In both the basal nodes and upper nodes, which are connected to the panicle, OsABCC1 was localized to the phloem region of vascular bundles. Furthermore, OsABCC1 was localized to the tonoplast and conferred phytochelatin-dependent As resistance in yeast. Knockout of OsABCC1 in rice resulted in decreased tolerance to As, but did not affect cadmium toxicity. At the reproductive growth stage, the As content was higher in the nodes and in other tissues of wild-type rice than in those of OsABCC1 knockout mutants, but was significantly lower in the grain. Taken together, our results indicate that OsABCC1 limits As transport to the grains by sequestering As in the vacuoles of the phloem companion cells of the nodes in rice.open117318Ysciescopu

Ground state of the three-band Hubbard model

The ground state of the two-dimensional three-band Hubbard model in oxide superconductors is investigated by using the variational Monte Carlo method. The Gutzwiller-projected BCS and spin- density wave (SDW) functions are employed in the search for a possible ground state with respect to dependences on electron density. Antiferromagnetic correlations are considerably enhanced near half-filling. It is shown that the d-wave state may exist away from half-filling for both the hole and electron doping cases. The overall structure of the phase diagram obtained by the calculations qualitatively agrees with experimental indications. The superconducting condensation energy is in reasonable agreement with the experimental value obtained from specific heat and critical magnetic field measurements for optimally doped samples. The inhomogeneous SDW state is also examined near 1/8-hole doping.Comment: 10 pages, 17 figure

Persistent current of two-chain Hubbard model with impurities

The interplay between impurities and interactions is studied in the gapless phase of two-chain Hubbard model in order to see how the screening of impurity potentials due to repulsive interactions in single-chain model will be changed by increasing the number of channels. Renormalization group calculations show that charge stiffness, and hence persistent current, of the two-chain model are less enhanced by interactions than single chain case.Comment: 4 Pages, RevTeX, No figures, Submitted to PR

Possible high TcT_c superconductivity mediated by antiferromagnetic spin fluctuations in systems with Fermi surface pockets

We propose that if there are two small pocket-like Fermi surfaces, and the spin susceptibility is pronounced around a wave vector {\bf Q} that bridges the two pockets, the spin-singlet superconductivity mediated by spin fluctuations may have a high transition temperature. Using the fluctuation exchange approximation, this idea is confirmed for the Hubbard on a lattice with alternating hopping integrals, for which $T_c$ is estimated to be almost an order of magnitude larger than those for systems with a large connected Fermi surface.Comment: 5 pages, uses RevTe

Spin-Density-Wave Phase Transitions in Quasi-One-Dimensional Dimerized Quarter-Filled Organic Conductors

We have studied spin density wave (SDW) phase transitions in dimerized quarter-filled Hubbard chains weakly coupled via interchain one-particle hopping, $t_{b0}$. It is shown that there exists a critical value of $t_{b0}$, $t_{b}^\ast$, between the incoherent metal regime ($t_{b0}<t_{b}^\ast$) and the Fermi liquid regime ($t_{b0}>t_{b}^\ast$) in the metallic phase above the SDW transition temperature. By using the 2-loop perturbative renormalization-group approach together with the random-phase-approximation, we propose a SDW phase diagram covering both of the regimes. The SDW phase transition from the incoherent metal phase for $t_{b0}<t_{b}^\ast$ is caused by growth of the intrachain electron-electron umklapp scattering toward low temperatures, which is regarded as preformation of the Mott gap. We discuss relevance of the present result to the SDW phase transitions in the quasi-one-dimensional dimerized quarter-filled organic conductors, (TMTTF)$_2$X and (TMTSF)$_2$X.Comment: 19 pages, 13 eps figures, uses jpsj.sty, corrected typo in the text and figures, no changes to the paper, to appear in J. Phys. Soc. Jpn. 68, No.8 (1999

Thermodynamics of low dimensional spin-1/2 Heisenberg ferromagnets in an external magnetic field within Green function formalism

The thermodynamics of low dimensional spin-1/2 Heisenberg ferromagnets (HFM) in an external magnetic field is investigated within a second-order two-time Green function formalism in the wide temperature and field range. A crucial point of the proposed scheme is a proper account of the analytical properties for the approximate transverse commutator Green function obtained as a result of the decoupling procedure. A good quantitative description of the correlation functions, magnetization, susceptibility, and heat capacity of the HFM on a chain, square and triangular lattices is found for both infinite and finite-sized systems. The dependences of the thermodynamic functions of 2D HFM on the cluster size are studied. The obtained results agree well with the corresponding data found by Bethe ansatz, exact diagonalization, high temperature series expansions, and quantum Monte Carlo simulations.Comment: 11 pages, 14 figure

An Asian emission inventory of anthropogenic emission sources for the period 1980?2020

International audienceWe developed a new emission inventory for Asia (Regional Emission inventory in ASia (REAS) Version 1.1) for the period 1980?2020. REAS is the first inventory to integrate historical, present, and future emissions in Asia on the basis of a consistent methodology. We present here emissions in 2000, historical emissions for 1980?2003, and projected emissions for 2010 and 2020 of SO2, NOx, CO, NMVOC, black carbon (BC), and organic carbon (OC) from fuel combustion and industrial sources. Total energy consumption in Asia more than doubled between 1980 and 2003, causing a rapid growth in Asian emissions, by 28% for BC, 30% for OC, 64% for CO, 108% for NMVOC, 119% for SO2, and 176% for NOx. In particular, Chinese NOx emissions showed a marked increase of 280% over 1980 levels, and growth in emissions since 2000 has been extremely high. These increases in China were mainly caused by increases in coal combustion in the power plants and industrial sectors. NMVOC emissions also rapidly increased because of growth in the use of automobiles, solvents, and paints. By contrast, BC, OC, and CO emissions in China showed decreasing trends from 1996 to 2000 because of a reduction in the use of biofuels and coal in the domestic and industry sectors. However, since 2000, Chinese emissions of these species have begun to increase. Thus, the emissions of air pollutants in Asian countries (especially China) showed large temporal variations from 1980?2003. Future emissions in 2010 and 2020 in Asian countries were projected by emission scenarios and from emissions in 2000. For China, we developed three emission scenarios: PSC (policy success case), REF (reference case), and PFC (policy failure case). In the 2020 REF scenario, Asian total emissions of SO2, NOx, and NMVOC were projected to increase substantially by 22%, 44%, and 99%, respectively, over 2000 levels. The 2020 REF scenario showed a modest increase in CO (12%), a lesser increase in BC (1%), and a slight decrease in OC (?5%) compared with 2000 levels. However, it should be noted that Asian total emissions are strongly influenced by the emission scenarios for China