Sequence analysis reveals mosaic genome of Aichi virus

Aichi virus is a positive-sense and single-stranded RNA virus, which demonstrated to be related to diarrhea of Children. In the present study, phylogenetic and recombination analysis based on the Aichi virus complete genomes available in GenBank reveal a mosaic genome sequence [GenBank: FJ890523], of which the nt 261-852 region (the nt position was based on the aligned sequence file) shows close relationship with AB010145/Japan with 97.9% sequence identity, while the other genomic regions show close relationship with AY747174/German with 90.1% sequence identity. Our results will provide valuable hints for future research on Aichi virus diversity

The Evaluation of Toxicity Induced by Psoraleae Fructus in Rats Using Untargeted Metabonomic Method Based on UPLC-Q-TOF/MS

Psoraleae Fructus is the dry and mature fruit of leguminous plant Psoralea corylifolia L., with the activity of warming kidney and enhancing yang, warming spleen, and other effects. However, large doses can cause liver and kidney toxicity. Therefore, it is necessary to evaluate the toxicity of Psoraleae Fructus systematically. Although traditional biochemical indicators and pathological tests have been used to evaluate the safety of drug, these methods lack sensitivity and specificity, so a fast and sensitive analytical method is urgently needed. In this study, an ultraperformance liquid chromatography coupled with quadrupole time-of-flight mass spectrometry (UPLC-Q-TOF/MS) method was used to analyze the metabolic profiles of rat plasma. The changes of metabolites in plasma samples were detected by partial least squares-discriminant analysis (PLS-DA). Compared with the control group, after 7 days of administration, the pathological sections showed liver and kidney toxicity, and the metabolic trend was changed. Finally, 13 potential biomarkers related to the toxicity of Psoraleae Fructus were screened. The metabolic pathways involved were glycerol phospholipids metabolism, amino acid metabolism, energy metabolism, and so forth. The discovery of these biomarkers laid a foundation for better explaining the hepatotoxicity and nephrotoxicity of Psoraleae Fructus and provided a guarantee for its safety evaluation

Research on the effects of complex terrain on the hydrodynamic performance of a deep-sea fishlike exploring and sampling robot moving near the sea bottom

Deep-sea exploring and sampling technologies have become frontier topics. Generally, the movable exploring mode near the seabed with low disturbance is an important way to improve the measurement accuracy and expand the measurement range. Inspired by fish, the fishlike propulsion method has the characteristics of low disturbance and high flexibility, which is very suitable for near-seabed detection under complex terrain conditions. However, the swimming mechanism and surrounding flow field evolution law of the robotic fish under the constraints of complex terrain are still unclear. In this paper, the confined terrain space is constructed with an undulating seabed and a narrow channel, and the hydrodynamic changing law and flow field evolution law of the autonomous swimming process of the fishlike swimmer in the confined space are analyzed. Moreover, the influence mechanism of the terrain on the motion performance of the robotic fish is revealed, and the optimal motion mode of the robotic fish under a complex terrain constraint is discussed. The results show that the propulsion force, Froude efficiency, and swimming stability of the robotic fish vary with the distance from the bottom under the undulating seabed condition lightly. When the distance from the bottom exceeds a certain value, it can be considered that the undulating seabed no longer affects the swimmer. Furthermore, when the robotic fish swims through a narrow channel with certain width, the swimming performance obviously varies with the distance from the boundary surface. During swimming in the confined terrain space, the propulsion force and swimming stability of robotic fish will decrease. In order to maintain the forward speed, the robotic fish should improve the tail-beat frequency in real time. However, considering the swimming stability, the tail-beat frequency is not the larger the better. The relevant conclusions of this paper could provide theoretical support for the development of low-disturbance bionic exploring and sampling platforms for deep-sea resources and environments

Enabling privacy-preserving sharing of genomic data for GWASs in decentralized networks

The human genome can reveal sensitive information and is potentially re-identifiable, which raises privacy and security concerns about sharing such data on wide scales. In this work, we propose a preventive approach for privacy-preserving sharing of genomic data in decentralized networks for Genome-wide association studies (GWASs), which have been widely used in discovering the association between genotypes and phenotypes. The key components of this work are: a decentralized secure network, with a privacy-preserving sharing protocol, and a gene fragmentation framework that is trainable in an end-to-end manner. Our experiments on real datasets show the effectiveness of our privacy-preserving approaches as well as significant improvements in efficiency when compared with recent, related algorithms

Global patterns of woody residence time and its influence on model simulation of aboveground biomass

Woody residence time (τw) is an important parameter that expresses the balance between mature forest recruitment/growth and mortality. Using field data collected from the literature, this study explored the global forest τw and investigated its influence on model simulations of aboveground biomass (AGB) at a global scale. Specifically, τw was found to be related to forest age, annual temperature, and precipitation at a global scale, but its determinants were different among various plant function types. The estimated global forest τw based on the filed data showed large spatial heterogeneity, which plays an important role in model simulation of AGB by a dynamic global vegetation model (DGVM). The τw could change the resulting AGB in tenfold based on a site-level test using the Monte Carlo method. At the global level, different parameterization schemes of the Integrated Biosphere Simulator using the estimated τw resulted in a twofold change in the AGB simulation for 2100. Our results highlight the influences of various biotic and abiotic variables on forest τw. The estimation of τw in our study may help improve the model simulations and reduce the parameter\u27s uncertainty over the projection of future AGB in the current DGVM or Earth System Models. A clearer understanding of the responses of τw to climate change and the corresponding sophisticated description of forest growth/mortality in model structure is also needed for the improvement of carbon stock prediction in future studies

Room-temperature ferromagnetism in epitaxial bilayer FeSb/SrTiO3(001) terminated with a Kagome lattice

Two-dimensional (2D) magnets exhibit unique physical properties for potential applications in spintronics. To date, most 2D ferromagnets are obtained by mechanical exfoliation of bulk materials with van der Waals interlayer interactions, and the synthesis of single or few-layer 2D ferromagnets with strong interlayer coupling remains experimentally challenging. Here, we report the epitaxial growth of 2D non-van der Waals ferromagnetic bilayer FeSb on SrTiO3(001) substrates stabilized by strong coupling to the substrate, which exhibits in-plane magnetic anisotropy and a Curie temperature above 300 K. In-situ low-temperature scanning tunneling microscopy/spectroscopy and density-functional theory calculations further reveal that a Fe Kagome layer terminates the bilayer FeSb. Our results open a new avenue for further exploring emergent quantum phenomena from the interplay of ferromagnetism and topology for application in spintronics

Development and application of a 6000-meter double decelerating lander

The deep-sea lander is an important equipment for in-situ detection and monitoring. It is of great significance to understand the benthic boundary layer’s physical, chemical, and ecological environment. A 6000-meter double decelerating lander was created to meet the deployment requirements of underwater detection and monitoring, allowing for long-term in-situ monitoring of several benthic boundary layer components. Protection of the installed ocean bottom seismometer (OBS) is required due to the lander’s and OBS’s different impact resistances. The double decelerating unit enables the OBS to avoid colliding with the seabed when the lander lands and then collides with the seabed at a slow speed rather than the speed at which the lander falls, which is intended to safeguard OBS from damage. To ensure a safe deployment, the lander’s static analysis and simulation were performed using ANSYS, and the motion characteristics of the application process were derived. Numerous data have been obtained after the lander’s successful application in the South China Sea. The lander provides an investigation approach for marine science and geochemistry, complementing a technical approach to marine environmental investigations

Holocene variability of East Asian summer monsoon as viewed from the speleothem δ18O records in central China

Monsoon precipitation in East China shows distinct spatial distribution and its variability is closely linked with the changes of the East Asian summer monsoon (EASM). Located in the transition zone between the southern subtropical humid climate and the northern warm temperate semi-humid climate, central China is a core region for recognizing and understanding the spatio-temporal variability of the EASM. Using U-series dating and stable isotope analysis on five stalagmites (MG-1, MG-2, MG-7, MG-40 and MG-64) from Magou Cave, Henan Province, Central China, we construct a high-resolution and precisely dated composite stalagmite O time series covering most of the Holocene. This composite record reveals variations in precipitation O between 11.7 and 1.1 ka BP with average resolution of ∼4 yrs. The Magou composite record demonstrates that EASM intensity dominates long-term changes in precipitation O, which generally follows the northern hemisphere summer insolation (NHSI) trend. Both, Ensemble Empirical Mode Decomposition (EEMD) and wavelet filtering analyses real that the amplitudes of long-term (100-500 and 500-3000 yrs) components were slightly reduced between 8.5 and 4.9 ka BP, implying a weakened influence of climatic forcings on centennial and even millennial timescales during this warm period. Variance on 1-30-yr timescales is relatively low and ascribed to sampling resolution. Fourteen weak EASM intervals, including the 8.2 ka event, were identified within the period corresponding broadly with the Holocene Megathermal. Since no cold excursions other than the 8.2 ka event are found in the Greenland ice core records, we tentatively propose that oscillations in tropical sea surface temperature (SST) likely play an important role in steering other weak monsoon events. Aligning the Magou composite record and other moisture records with archaeological records from the study region, it seems that climate change influenced both the spatial distribution and agricultural practices of ancient cultures. However, overall moderate climatic changes in this region, most likely characterized by shifts between subtropical humid climate and warm temperate semi-humid climate, supported a generally consecutive development of ancient cultures without major hiatuses

Searching for the nano-Hertz stochastic gravitational wave background with the Chinese Pulsar Timing Array Data Release I

Observing and timing a group of millisecond pulsars (MSPs) with high rotational stability enables the direct detection of gravitational waves (GWs). The GW signals can be identified from the spatial correlations encoded in the times-of-arrival of widely spaced pulsar-pairs. The Chinese Pulsar Timing Array (CPTA) is a collaboration aiming at the direct GW detection with observations carried out using Chinese radio telescopes. This short article serves as a `table of contents' for a forthcoming series of papers related to the CPTA Data Release 1 (CPTA DR1) which uses observations from the Five-hundred-meter Aperture Spherical radio Telescope (FAST). Here, after summarizing the time span and accuracy of CPTA DR1, we report the key results of our statistical inference finding a correlated signal with amplitude \log A_{\rm c}= -14.4 \,^{+1.0}_{-2.8} for spectral index in the range of $\alpha\in [-1.8, 1.5]$ assuming a GW background (GWB) induced quadrupolar correlation. The search for the Hellings-Downs (HD) correlation curve is also presented, where some evidence for the HD correlation has been found that a 4.6-$\sigma$ statistical significance is achieved using the discrete frequency method around the frequency of 14 nHz. We expect that the future International Pulsar Timing Array data analysis and the next CPTA data release will be more sensitive to the nHz GWB, which could verify the current results.Comment: 18 pages, 6 figures, submitted to "Research in astronomy and astrophysics" 22nd March 202