Physical space description of decorated quasicrystals

In this paper the systematic method of dealing with the arbitrary decorations of quasicrystals is presented. The method is founded on the average unit cell formalism and operates in the physical space only, where each decorating atom manifests itself just by an additional component of the displacement density function in the average unit cell. Such approach allows us to use almost all classical crystallography algorithms for structure refining based on experimental data and may meaningly decrease the number of parameters which have to be fit. Further help for such analysis may be the use of proposed recently average Patterson function, here applied to decorated sets. As an example we present a description of a class of decorated quasicrystals based on Sturmian sequence of two interatomic spacings: we calculate explicitly structure factor, the shape of average Patterson function and give an algorithm for pattern analysis.Comment: 17 pages, 5 figure

An extinction rule for a class of 1D quasicrystals

We study decorated one-dimensional quasicrystal obtained by a non-standard projection of a part of two-dimensional lattice. We focus on the impact of varying relative positions of decorated sites. First, we give general expression for the structure factor. Subsequently we analyze an example of extinction rule.Comment: 5 pages, 2 figures, LaTex2e, to appear in ICQ9 Proceeding (Philosophical Magazine

Stable single α-Helices are constant force springs in proteins

Single α-helix (SAH) domains are rich in charged residues (Arg, Lys, and Glu) and stable in solution over a wide range of pH and salt concentrations. They are found in many different proteins where they bridge two functional domains. To test the idea that their high stability might enable these proteins to resist unfolding along their length, the properties and unfolding behavior of the predicted SAH domain from myosin-10 were characterized. The expressed and purified SAH domain was highly helical, melted non-cooperatively, and was monomeric as shown by circular dichroism and mass spectrometry as expected for a SAH domain. Single molecule force spectroscopy experiments showed that the SAH domain unfolded at very low forces (<30 pN) without a characteristic unfolding peak. Molecular dynamics simulations showed that the SAH domain unfolds progressively as the length is increased and refolds progressively as the length is reduced. This enables the SAH domain to act as a constant force spring in the mechanically dynamic environment of the cell

Coexistence of bicuspid aortic valve, aberrant right subclavian artery and common origin of carotid arteries

Background: Prevalence of bicuspid aortic valve (BAV) and right aberrant sub-clavian artery (ASA) separately is relatively common in general population, and much higher in some disorders. Surprisingly, coexistence of both valve and vessel anomalies has only been reported in single cases. Materials and methods: From 2008 to 2016, in a single, high-volume tertiary cardiac centre, patients who underwent chest computed tomography (CT) for various reasons, were retrospectively screened for the presence of right ASA. Results: Seventy-two patients with either right or left ASA were identified by CT. Among them 7 cases of BAV and right ASA coexistence were identified. Additionally, 1 case with coexisting common origin of carotid arteries (COCA) was visualised in this subgroup. Conclusions: Although coexistence of ASA and BAV has not been reported in paediatric population, it has been diagnosed in very few adults as well as in our series. Additional presence of COCA in this group seems to be very rare. From practical point of view, heart cannulation via the radial artery and subsequent ASA may be challenging. Similarly, COCA presence may have surgical implications during corrective procedures

DFT Calculations as a Tool to Analyse Quadrupole Splittings of Spin Crossover Fe(II) complexes

Density functional methods have been applied to calculate the quadrupole splitting of a series of iron(II) spin crossover complexes. Experimental and calculated values are in reasonable agreement. In one case spin-orbit coupling is necessary to explain the very small quadrupole splitting value of 0.77 mm/s at 293 K for a high-spin isomer