nuclear_emydura_group_beast_input

Nuclear data in nexus format used as the input for the Beast analysis

emydura.group

XML file used in the BEAST molecular clock analysis using only the Redbank Plains fossil calibration

reduced_gene_set_CR_ND4_phylogeny

This nexus file contains the sequence data for the reduced gene set (ND4 and CR) used to recover the phylogeny for mitochondrial haplotypes of Elseya novaeguineae, with E. branderhorsti haplotypes as outgroup

full_gene_set_12S_16S_CO1_CytB_phylogeny

This nexus file contains the sequence data for the full gene set (ND4, CR, 12s, 16s,Cox1, Cytb) used to confirm major nodes and refine bootstrap support for Elseya novaeguineae, with E. branderhorsti as outgroup

mtdna_emydura_group_beast_input

Mitochondrial data in nexus format used as the input for the Beast analysis

emydura_group_beast_trees_comb_1-7-5_output

Maximum clade credibility tree saved from figtree from the combined output of our Beast runs