Genetic differentiation of brackish water populations of cod Gadus morhua in the southern Baltic, inferred from genotyping using SNP-arrays

The Baltic is a semi-enclosed sea characterised by decreasing salinity in the eastern and northern direction with only the deeper parts of the southern Baltic suitable as spawning grounds for marine species like cod. Baltic cod exhibits various adaptations to brackish water conditions, yet the inflow of salty North Sea water near the bottom remains an influence on the spawning success of the Baltic cod. The eastern Baltic population has been very weakly studied in comparison with the western population. The aim of this study is to demonstrate for the first time genetic differentiation by the use of a large number of SNPs between eastern and western Baltic populations existing in differentiated salinity conditions. Two cod samples were collected from the Bay of Gdańsk, Poland and one from the Kiel Bight, Germany. Samples were genotyped using a cod derived SNP-array (Illumina) with 10 913 SNPs. A selection of diagnostic SNPs was performed. A set of 7944 validated SNPs were analysed to assess the differentiation of three samples of cod. Results indicated a clear distinctness of the Kiel Bight from the populations of the eastern Baltic. FST comparison between both eastern samples was non-significant. Clustering analysis, principal coordinates analysis and assignment test clearly indicated that the eastern samples should be considered as one subpopulation, well differentiated from the western subpopulation. With the SNP approach, no differentiation between groups containing ‘healthy’ and ‘non-healthy’ cod individuals was observed

New and ‘visiting’ fish species collected off the Western coast of Poland (Baltic Sea) in 2007–2008 with a description of their parasite fauna

The first occurrence of striped red mullet Mullus surmuletus in the Pomeranian Bay (in 2007) and the occurrence of three very rarely noted species (tub gurnard Chelidonichthys lucerna, Atlantic horse mackerel Trachurus trachurus, thicklip grey mullet Chelon labrosus) collected in 2007–2008 in the Pomeranian Bay, Szczecin Lagoon and Lake Dąbie are reported. Their expansion is probably due to increased sea temperatures resulting from climate change, as well as the inflow of saline water. The ‘visitors’ hosted eight pathogens from four taxonomic groups: Protozoa, Nematoda, Acanthocephala and Mollusca. Nematodes, the most numerous ones, were found in three host species. All the parasite species were new for the hosts examined; only the larvae of the acanthocephalan Corynosoma strumosum had already been recorded in one of the hosts (Chelidonichthys lucerna). The stomachs of almost all the fish examined were empty, but the species composition of the parasite fauna found showed that the fish must have ingested some food in the Pomeranian Bay