963 research outputs found

    A Large-Scale Empirical Study on Semantic Versioning in Golang Ecosystem

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    Third-party libraries (TPLs) have become an essential component of software, accelerating development and reducing maintenance costs. However, breaking changes often occur during the upgrades of TPLs and prevent client programs from moving forward. Semantic versioning (SemVer) has been applied to standardize the versions of releases according to compatibility, but not all releases follow SemVer compliance. Lots of work focuses on SemVer compliance in ecosystems such as Java and JavaScript beyond Golang (Go for short). Due to the lack of tools to detect breaking changes and dataset for Go, developers of TPLs do not know if breaking changes occur and affect client programs, and developers of client programs may hesitate to upgrade dependencies in terms of breaking changes. To bridge this gap, we conduct the first large-scale empirical study in the Go ecosystem to study SemVer compliance in terms of breaking changes and their impact. In detail, we purpose GoSVI (Go Semantic Versioning Insight) to detect breaking changes and analyze their impact by resolving identifiers in client programs and comparing their types with breaking changes. Moreover, we collect the first large-scale Go dataset with a dependency graph from GitHub, including 124K TPLs and 532K client programs. Based on the dataset, our results show that 86.3% of library upgrades follow SemVer compliance and 28.6% of no-major upgrades introduce breaking changes. Furthermore, the tendency to comply with SemVer has improved over time from 63.7% in 2018/09 to 92.2% in 2023/03. Finally, we find 33.3% of downstream client programs may be affected by breaking changes. These findings provide developers and users of TPLs with valuable insights to help make decisions related to SemVer.Comment: 11 pages, 4 figure

    Assessment of habitat suitability and connectivity across the potential distribution landscape of the sambar (Rusa unicolor) in Southwest China

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    Habitat suitability assessment is the basis for wildlife conservation management and habitat restoration. It is a useful tool to understand the quality of wildlife habitat and its potential spatial distribution. In order to reveal the habitat suitability and connectivity of sambar (Rusa unicolor) to promote species and biodiversity conservation, this study collected records of sambar (Rusa unicolor) from over 2,000 camera traps in the forests of Southwest China in the past 5 years to assess the overall situation of their habitat. The results of the species distribution model revealed that the suitable habitat area for sambar in the five major mountain ranges (Minshan, Qionglai, Daxiangling, Xiaoxiangling, and Liangshan) in Southwest China is 18,231 km2, accounting for 17.02% of the total area. The most suitable habitat of sambar is primarily distributed in Qionglai, as well as the intersection areas of Daxiangling, Xiaoxiangling, and Minshan. The temperature annual range, temperature seasonality, elevation, and distance to road were important factors affecting the distribution of suitable habitat for sambar. Analysis of landscape pattern shows that there were 273 habitat patches, with a maximum patch area of 9,983 km2, accounting for 54.8% of the total suitable habitat area. However, the segmentation index and separation index of each habitat patch were 0.99 and 106.58, respectively, indicating a relatively high habitat fragmentation in the study area. The results of habitat connectivity analysis showed that the Qionglai mountains have the largest suitable habitat area and the highest connectivity among habitat patches. However, habitat connectivity between the five mountains is very low, suggesting that gene flow among these mountain ranges is probably limited. We therefore recommend strengthening protection of sambar and their habitat, with special attention to the establishment of corridors between the different mountain populations

    Radiosensitizing effects of Sestrin2 in PC3 prostate cancer cells

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    Objective(s): The stress-responsive genes of Sestrin family are recognized as new tumor suppressor genes in breast carcinoma, however, the function of Sestrin family in human prostate cancer is not clear. Ionizing radiation (IR) is known to induce Sestrin gene expression in breast cancer cells. However, the response of Sestrin to IR has not been reported in PC3 prostate cancer cells. Materials and Methods: Sestrin2 expression in prostate cancer cell lines (PC3, LNCaP clone FGC, and DU145) was detected by Western blot and real-time PCR. Cell counting kit (CCK-8) was used to detect cellular proliferation. The radiosensitivity of PC3 cells was detected by clonogenic assay. Results: Sestrin2 expression in prostate cancer cell lines (PC3, LNCaP clone FGC, and DU145) is low. In vitro assays indicated that over-expressing Sestrin2 in human prostate cancer PC3 inhibited tumor proliferation. In addition, elevated Sestrin2 expression sensitized PC3 cells to IR. Conclusion: We determined Sestrin2 may function as a tumor suppressor through repressing proliferation, mediating sensitization to IR in PC3 cells

    The Spatial Distribution of LGR5+ Cells Correlates With Gastric Cancer Progression

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    In this study we tested the prevalence, histoanatomical distribution and tumour biological significance of the Wnt target protein and cancer stem cell marker LGR5 in tumours of the human gastrointestinal tract. Differential expression of LGR5 was studied on transcriptional (real-time polymerase chain reaction) and translational level (immunohistochemistry) in malignant and corresponding non-malignant tissues of 127 patients comprising six different primary tumour sites, i.e. oesophagus, stomach, liver, pancreas, colon and rectum. The clinico-pathological significance of LGR5 expression was studied in 100 patients with gastric carcinoma (GC). Non-neoplastic tissue usually harboured only very few scattered LGR5+ cells. The corresponding carcinomas of the oesophagus, stomach, liver, pancreas, colon and rectum showed significantly more LGR5+ cells as well as significantly higher levels of LGR5-mRNA compared with the corresponding non-neoplastic tissue. Double staining experiments revealed a coexpression of LGR5 with the putative stem cell markers CD44, Musashi-1 and ADAM17. Next we tested the hypothesis that the sequential changes of gastric carcinogenesis, i.e. chronic atrophic gastritis, intestinal metaplasia and invasive carcinoma, are associated with a reallocation of the LGR5+ cells. Interestingly, the spatial distribution of LGR5 changed: in non-neoplastic stomach mucosa, LGR5+ cells were found predominantly in the mucous neck region; in intestinal metaplasia LGR5+ cells were localized at the crypt base, and in GC LGR5+ cells were present at the luminal surface, the tumour centre and the invasion front. The expression of LGR5 in the tumour centre and invasion front of GC correlated significantly with the local tumour growth (T-category) and the nodal spread (N-category). Furthermore, patients with LGR5+ GCs had a shorter median survival (28.0±8.6 months) than patients with LGR5− GCs (54.5±6.3 months). Our results show that LGR5 is differentially expressed in gastrointestinal cancers and that the spatial histoanatomical distribution of LGR5+ cells has to be considered when their tumour biological significance is sought

    Measurement and interpretation of same-sign W boson pair production in association with two jets in pp collisions at s = 13 TeV with the ATLAS detector

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    This paper presents the measurement of fducial and diferential cross sections for both the inclusive and electroweak production of a same-sign W-boson pair in association with two jets (W±W±jj) using 139 fb−1 of proton-proton collision data recorded at a centre-of-mass energy of √s = 13 TeV by the ATLAS detector at the Large Hadron Collider. The analysis is performed by selecting two same-charge leptons, electron or muon, and at least two jets with large invariant mass and a large rapidity diference. The measured fducial cross sections for electroweak and inclusive W±W±jj production are 2.92 ± 0.22 (stat.) ± 0.19 (syst.)fb and 3.38±0.22 (stat.)±0.19 (syst.)fb, respectively, in agreement with Standard Model predictions. The measurements are used to constrain anomalous quartic gauge couplings by extracting 95% confdence level intervals on dimension-8 operators. A search for doubly charged Higgs bosons H±± that are produced in vector-boson fusion processes and decay into a same-sign W boson pair is performed. The largest deviation from the Standard Model occurs for an H±± mass near 450 GeV, with a global signifcance of 2.5 standard deviations

    Search for pair production of squarks or gluinos decaying via sleptons or weak bosons in final states with two same-sign or three leptons with the ATLAS detector

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    A search for pair production of squarks or gluinos decaying via sleptons or weak bosons is reported. The search targets a final state with exactly two leptons with same-sign electric charge or at least three leptons without any charge requirement. The analysed data set corresponds to an integrated luminosity of 139 fb−1 of proton-proton collisions collected at a centre-of-mass energy of 13 TeV with the ATLAS detector at the LHC. Multiple signal regions are defined, targeting several SUSY simplified models yielding the desired final states. A single control region is used to constrain the normalisation of the WZ + jets background. No significant excess of events over the Standard Model expectation is observed. The results are interpreted in the context of several supersymmetric models featuring R-parity conservation or R-parity violation, yielding exclusion limits surpassing those from previous searches. In models considering gluino (squark) pair production, gluino (squark) masses up to 2.2 (1.7) TeV are excluded at 95% confidence level

    Studies of new Higgs boson interactions through nonresonant HH production in the b¯bγγ fnal state in pp collisions at √s = 13 TeV with the ATLAS detector

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    A search for nonresonant Higgs boson pair production in the b ¯bγγ fnal state is performed using 140 fb−1 of proton-proton collisions at a centre-of-mass energy of 13 TeV recorded by the ATLAS detector at the CERN Large Hadron Collider. This analysis supersedes and expands upon the previous nonresonant ATLAS results in this fnal state based on the same data sample. The analysis strategy is optimised to probe anomalous values not only of the Higgs (H) boson self-coupling modifer κλ but also of the quartic HHV V (V = W, Z) coupling modifer κ2V . No signifcant excess above the expected background from Standard Model processes is observed. An observed upper limit µHH < 4.0 is set at 95% confdence level on the Higgs boson pair production cross-section normalised to its Standard Model prediction. The 95% confdence intervals for the coupling modifers are −1.4 < κλ < 6.9 and −0.5 < κ2V < 2.7, assuming all other Higgs boson couplings except the one under study are fxed to the Standard Model predictions. The results are interpreted in the Standard Model efective feld theory and Higgs efective feld theory frameworks in terms of constraints on the couplings of anomalous Higgs boson (self-)interactions
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