A comparison between adaptive kernel density estimation and Gaussian Mixture Regression for real-time tumour motion prediction from external surface motion

In this present study, tumour (3D) locations are predicted via external surface motion, extracted from abdomen/ thoracic surface measurements that can be used to enhance dose targeting in external beam radiotherapy. Canonical Correlation Analysis (CCA) is applied to the surface and tumour motion data to maximise the correlation between them. This correlation is exploited for motion prediction [1]. Nine dynamic CT datasets were used to extract the surface and tumour motion and to create the Canonical Correlation model (CCM). Gaussian Mixture Regression (GMR) and Adaptive Kernel Density Estimation (AKDE) were trained on these nine datasets to predict the respiratory signal by updating the surface motion and CCM. A leave-one-out method was used to evaluate and compare the performance of GMR and AKDE in predicting the tumour motion. © 2012 IEEE

Transgenic Overexpression of LARGE Induces alpha-Dystroglycan Hyperglycosylation in Skeletal and Cardiac Muscle

Background: LARGE is one of seven putative or demonstrated glycosyltransferase enzymes defective in a common group of muscular dystrophies with reduced glycosylation of alpha-dystroglycan. Overexpression of LARGE induces hyperglycosylation of alpha-dystroglycan in both wild type and in cells from dystroglycanopathy patients, irrespective of their primary gene defect, restoring functional glycosylation. Viral delivery of LARGE to skeletal muscle in animal models of dystroglycanopathy has identical effects in vivo, suggesting that the restoration of functional glycosylation could have therapeutic applications in these disorders. Pharmacological strategies to upregulate Large expression are also being explored.Methodology/Principal Findings: In order to asses the safety and efficacy of long term LARGE over-expression in vivo, we have generated four mouse lines expressing a human LARGE transgene. On observation, LARGE transgenic mice were indistinguishable from the wild type littermates. Tissue analysis from young mice of all four lines showed a variable pattern of transgene expression: highest in skeletal and cardiac muscles, and lower in brain, kidney and liver. Transgene expression in striated muscles correlated with alpha-dystroglycan hyperglycosylation, as determined by immunoreactivity to antibody IIH6 and increased laminin binding on an overlay assay. Other components of the dystroglycan complex and extracellular matrix ligands were normally expressed, and general muscle histology was indistinguishable from wild type controls. Further detailed muscle physiological analysis demonstrated a loss of force in response to eccentric exercise in the older, but not in the younger mice, suggesting this deficit developed over time. However this remained a subclinical feature as no pathology was observed in older mice in any muscles including the diaphragm, which is sensitive to mechanical load-induced damage.Conclusions/Significance: This work shows that potential therapies in the dystroglycanopathies based on LARGE upregulation and alpha-dystroglycan hyperglycosylation in muscle should be safe

Transcutaneous measurement of volume blood flow

Blood flow velocity measurements, using Doppler velocimeter, are described. The ability to measure blood velocity using ultrasound is derived from the Doppler effect; the change in frequency which occurs when sound is reflected or transmitted from a moving target. When ultrasound of the appropriate frequency is transmitted through a moving blood stream, the blood cells act as point scatterers of ultrasonic energy. If this scattered ultrasonic energy is detected, it is found to be shifted in frequency according to the velocity of the blood cells, nu, the frequency of the incident sound, f sub o, the speed of sound in the medium, c, and the angle between the sound beam and the velocity vector, o. The relation describing this effect is known as the Doppler equation. Delta f = 2 f sub o x nu x cos alpha/c. The theoretical and experimental methods are evaluated

Development of ultrasonic methods for hemodynamic measurements

A transcutanous method to measure instantaneous mean blood flow in peripheral arteries of the human body was defined. Transcutanous and implanted cuff ultrasound velocity measurements were evaluated, and the accuracies of velocity, flow, and diameter measurements were assessed for steady flow. Performance criteria were established for the pulsed Doppler velocity meter (PUDVM), and performance tests were conducted. Several improvements are suggested

Earthquake networks based on similar activity patterns

Earthquakes are a complex spatiotemporal phenomenon, the underlying mechanism for which is still not fully understood despite decades of research and analysis. We propose and develop a network approach to earthquake events. In this network, a node represents a spatial location while a link between two nodes represents similar activity patterns in the two different locations. The strength of a link is proportional to the strength of the cross-correlation in activities of two nodes joined by the link. We apply our network approach to a Japanese earthquake catalog spanning the 14-year period 1985-1998. We find strong links representing large correlations between patterns in locations separated by more than 1000 km, corroborating prior observations that earthquake interactions have no characteristic length scale. We find network characteristics not attributable to chance alone, including a large number of network links, high node assortativity, and strong stability over time.Comment: 8 pages text, 9 figures. Updated from previous versio

Intercalation and Staging Behavior in Super-Oxygenated La2CuO4+δLa_2CuO_{4 + \delta}

A high temperature electrochemical oxidation process has been used to produce large single crystals of $La_2CuO_{4 + \delta}$ suitable for neutron scattering experiments. Below room temperature the oxygen-rich phases have structural superlattice scattering peaks which indicate new periodicities ranging from 2 to 6.6 layers perpendicular to the copper oxide planes. A model structure originally proposed for $La_2NiO_{4 + \delta}$ can account for the superlattice peaks as a result of anti-phase domain boundaries between different tilt directions of the CuO$_6$ octahedra. Within this model, the changes in CuO$_6$ tilt directions are induced by segregated layers of interstitial oxygen which order in a manner similar to intercalants in graphite. This structural model thus clarifies previous work and establishes $La_2CuO_{4 + \delta}$ as a unique lamellar superconducting system with annealed disorder.Comment: 23 pages, latex, 6 figures (not including Figures 2 & 7 and Table 1 which were not submitted but are available upon request to the Authors at: [email protected]