Towards Independent Particle Reconstruction from Cryogenic Transmission Electron Microscopy

Coronary heart disease is the single largest killer of Americans so improved means of detecting risk factors before arterial obstructions appear are expected to lead to a improvement in quality of life with a reduced cost. This paper introduces a new approach to 3-D reconstruction of individual particles based on statistical modeling from a sparse set of 2-D projection images. This paper introduces a new approach to 3-D reconstruction of individual particles based on statistical modeling from a sparse set of 2-D projection images. The method is in contrast to the current state of practice where reconstruction is performed via signal processing or Bayesian methods that use averaged images acquired from an ensemble of particles. As such, this new approach has its impetus in use for novel diagnostic tests such as LDL and HDL particle shape characterization. The approach is also expected to have uses in areas such as quality assurance for drug delivery nano-technologies and for general proteomic studies. The individual particle reconstruction algorithm is based on a hidden Markov model. Higher order Markov chain statistics, which are generated from the a priori model of the target of interest, can be derived from traditional methods such as single particle reconstruction and/or the underlying physical properties of the particle. By placing the reconstruction voxel space at a 45° angle to the projection image, 4-passes of the HMM processing can be performed from a single image. Reconstruction results from a simple model and a single projection image resulted in better than 98% reconstruction accuracy as compared to the original target

Gauging the three-nucleon spectator equation

We derive relativistic three-dimensional integral equations describing the interaction of the three-nucleon system with an external electromagnetic field. Our equations are unitary, gauge invariant, and they conserve charge. This has been achieved by applying the recently introduced gauging of equations method to the three-nucleon spectator equations where spectator nucleons are always on mass shell. As a result, the external photon is attached to all possible places in the strong interaction model, so that current and charge conservation are implemented in the theoretically correct fashion. Explicit expressions are given for the three-nucleon bound state electromagnetic current, as well as the transition currents for the scattering processes \gamma He3 -> NNN, Nd -> \gamma Nd, and \gamma He3 -> Nd. As a result, a unified covariant three-dimensional description of the NNN-\gamma NNN system is achieved.Comment: 23 pages, REVTeX, epsf, 4 Postscript figure

Gauge-invariant theory of pion photoproduction with dressed hadrons

Based on an effective field theory of hadrons in which quantum chromodynamics is assumed to provide the necessary bare cutoff functions, a gauge-invariant theory of pion photoproduction with fully dressed nucleons is developed. The formalism provides consistent dynamical descriptions of pi-N --> pi-N scattering and Gamma-N --> pi-N production mechanisms in terms of nonlinear integral equations for fully dressed hadrons. Defining electromagnetic currents via the gauging of hadronic n-point Green's functions, dynamically detailed currents for dressed nucleons are introduced. The dressed hadron currents and the pion photoproduction current are explicitly shown to satisfy gauge invariance in a self-consistent manner. Approximations are discussed that make the nonlinear formalism manageable in practice and yet preserve gauge invariance. This is achieved by recasting the gauge conditions for all contributing interaction currents as continuity equations with ``surface'' terms for the individual particle legs coming into or going out of the hadronic interaction region. General procedures are given that approximate any type of (global) interaction current in a gauge-invariance preserving manner as a sum of single-particle ``surface'' currents. It is argued that these prescriptions carry over to other reactions, irrespective of the number or type of contributing hadrons or hadronic systems.Comment: 33 pages, RevTeX; includes 8 postscript figures (requires psfig.sty). This version corrects some minor errors, etc.; contains updated references. Accepted for publication in Phys. Rev. C56 (Oct. 97

A Gauge Invariant Unitary Theory for Pion Photoproduction

A covariant, unitary and gauge invariant theory for pion photoproduction on a single nucleon is presented. To achieve gauge invariance at the operator level one needs to include both the $\pi N$ and $\gamma\pi N$ thresholds. The final amplitude can be written in terms of a distorted wave in the final $\pi N$ channel provided one includes additional diagrams to the standard Born term in which the photon is coupled to the final state pion and nucleon. These additional diagrams are required in order to satisfy gauge invariance.Comment: 4 pages, LaTeX, 1 figure as a separate uuencoded compressed tar fil

Solution of the Bethe-Salpeter equation for pion-nucleon scattering

A relativistic description of pion-nucleon scattering based on the four-dimensional Bethe-Salpeter equation is presented. The kernel of the equation consists of s- and u-channel nucleon and delta pole diagrams, as well as rho and sigma exchange in the t-channel. The Bethe-Salpeter equation is solved by means of a Wick rotation, and good fits are obtained to the s- and p-wave phase shifts up to 360 MeV pion laboratory energy. The coupling constants determined by the fits are consistent with the commonly accepted values in the literature.Comment: 34 pages, RevTeX; 7 figures. Several references added, a few typos corrected. Accepted for publication in Physical Review

Meson-exchange Model for πN\pi N scattering and γN−>πN\gamma N -> \pi N reaction

An effective Hamiltonian consisting of bare $\Delta \leftrightarrow\pi N$, $\gamma N$ vertex interactions and energy-independent meson-exchange $\pi N \leftrightarrow \pi N, \gamma N$ transition operators is derived by applying a unitary transformation to a model Lagrangian with $N,\Delta,\pi$, $\rho$, $\omega$, and $\gamma$ fields. With appropraite phenomenological form factors and coupling constants for $\rho$ and $\Delta$, the model can give a good description of $\pi N$ scattering phase shifts up to the $\Delta$ excitation energy region. It is shown that the best reproduction of the recent LEGS data of the photon-asymmetry ratios in $\gamma p \rightarrow \pi ^0 p$ reactions provides rather restricted constraints on the coupling strengths $G_E$ of the electric $E2$ and $G_M$ of the magnetic $M1$ transitions of the bare $\Delta \leftrightarrow \gamma N$ vertex and the less well-determined coupling constant $g_{\omega NN}$ of $\omega$ meson. Within the ranges that $G_M = 1.9 \pm 0.05$, $G_E = 0.0 \pm 0.025$, and $7 \leq g_{\omega NN}\leq 10.5$, the predicted differential cross sections and photon-asymmetry ratios are in an overall good agreement with the data of $\gamma p \rightarrow \pi ^0 p$, $\gamma p \rightarrow \pi ^+ n$, and $\gamma n\rightarrow \pi ^- p$ reactions from 180 MeV to the $\Delta$ excitation region. The predicted $M_{1^+}$ and $E_{1^+}$ multipole amplitudes are also in good agreement with the empirical values determined by the amplitude analyses. The constructed effective Hamiltonian is free of the nucleon renormlization problem and hence is suitable for nuclear many-body calculations. We have also shown that the assumptions made in the $K$-matrix method, commonly used in extracting empirically the $\gamma N \rightarrow \Delta$ transition amplitudes from the data, are consistent withComment: 49 pages + 23 Figures, Revte

Pride and popcorn: consuming the idea of community at film screenings in the Turkish diaspora

A range of studies have revealed the interrelatedness of identity construction, community formation and media among diasporas, mostly focusing on domestic contexts. Seeking to add further nuance to the understanding of the social lives of diasporas, we concentrate on media culture in the public environment of the film theatre. The significance of diasporic film consumption is investigated through a local audience study of Turkish film screenings in Antwerp. The phenomenon of the screenings was analysed through a multi-method approach, including 536 questionnaires among audiences, 19 in-depth interviews and 3 group interviews, along with previous findings (on distribution and exploitation) of the same project. The results show that Turkish films are almost exclusively attended by people with Turkish roots, creating a Turkish diasporic space within the boundaries of the urban and the public. The audience study shows that the screenings fulfil a major social role but also affect understandings of community

Dynamical Study of the Delta Excitation in N(e,e' pi) Reactions

The dynamical model developed in [Phys. Rev. C 54, 2660 (1996)] has been applied to investigate the pion electroproduction reactions on the nucleon. It is found that the model can describe to a very large extent the recent data of p(e,e' pi^0) reaction from Jefferson Laboratory and MIT-Bates. The extracted magnetic dipole(M1), electric dipole(E2), and Coulomb(C2) strengths of the gamma N -> Delta transition are presented. It is found that the C2/M1 ratio drops significantly with Q^2 and reaches about -13% at Q^2=4 (GeV/c)^2, while the E2/M1 ratio remains close to the value \sim -3 % at the Q^2=0 photon point. The determined M1 transition form factor drops faster than the usual dipole form factor of the proton. We also find that the non-resonant interactions can dress the gamma N -> Delta vertex to enhance strongly its strength at low Q^2, but much less at high Q^2. Predictions are presented for future experimental tests. Possible developments of the model are discussed.Comment: 39 pages,17 figures, with RevTeX, to be submitted Phys. Rev.