A new species of Gyrodactylus (Monogenea, Gyrodactylidae), an ectoparasite from the endemic Iranocichla hormuzensis (Teleostei, Cichlidae), the only Iranian cichlid

Iranocichla hormuzensis occupies a biogeographically peculiar position. This endemic of southern Iran is the only Iranian cichlid. While it is phylogenetically related to African oreochromine members of the cichlid family, it remains unclear how it has dispersed into its current range. It is one of the many lasting enigmas of cichlid biogeography. Monogenean fish parasites may provide useful additional information in such cases. Therefore, I. hormuzensis was examined for these flatworms. A gyrodactylid parasite is reported and compared to congeners from the Palearctic and from cichlids. In this way, we verify whether it shows affinities to parasites from fishes that are either biogeographically or phylogenetically close to Iranocichla hormuzensis. The species is new to science and is described as Gyrodactylus jalalii sp. nov. This is the first description of a parasite infecting I. hormuzensis. Because of the fixation method or age of the material, DNA could not be isolated. Due to the lack of genetic data, no conclusions can be drawn on its phylogenetic positioning. Indeed, Gyrodactylus phylogeny cannot be inferred from morphological characteristics alone. Moreover, the congeners phenotypically reminiscent of the new species belong to a Gyrodactylus clade which is highly diverse in geographic range and host choice. Hence, there is no evidence linking the new species to an exclusively African or cichlid-bound Gyrodactylus lineage

Seasonality of the pelagic ichthyofauna in the Lazarev Sea

The Southern Ocean is characterised by an extreme seasonality which is best observed by the huge variation in sea ice extent. It expands from a minimum extent of 4 million square kilometres in February to a maximum of 19 million square kilometres in September and influences the physics and chemistry of the surface layers and the corresponding life histories of organisms. Reduced light condition and sea ice cover have a pronounced impact on primary production and predation risk in the pelagic zone. Here we present comparison of the distribution of fish in the Lazarev Sea correlated to biotic an abiotic features. Samples were collected in the framework of three LAKRIS (Lazarev Krill Study) campaigns onboard RV Polarstern during summer, fall and winter. The main focus was on factors affecting krill distribution. As such a wide variety of biotic and abiotic measures were made. Fish and fish larvae were collected from trawls from the upper 200m during both seasons. Both during summer and winter larval composition was dominated by pre-metamorphic Electrona antarctica and Notolepis coatsi. Post-metamorphic E. antarctica showed a pronounced seasonal difference in occurrence

The European sea bass <i>Dicentrarchus labrax</i> genome puzzle: comparative BAC-mapping and low coverage shotgun sequencing

BackgroundFood supply from the ocean is constrained by the shortage of domesticated and selected fish. Development of genomic models of economically important fishes should assist with the removal of this bottleneck. European sea bass Dicentrarchus labrax L. (Moronidae, Perciformes, Teleostei) is one of the most important fishes in European marine aquaculture; growing genomic resources put it on its way to serve as an economic model.ResultsEnd sequencing of a sea bass genomic BAC-library enabled the comparative mapping of the sea bass genome using the three-spined stickleback Gasterosteus aculeatus genome as a reference. BAC-end sequences (102,690) were aligned to the stickleback genome. The number of mappable BACs was improved using a two-fold coverage WGS dataset of sea bass resulting in a comparative BAC-map covering 87% of stickleback chromosomes with 588 BAC-contigs. The minimum size of 83 contigs covering 50% of the reference was 1.2 Mbp; the largest BAC-contig comprised 8.86 Mbp. More than 22,000 BAC-clones aligned with both ends to the reference genome. Intra-chromosomal rearrangements between sea bass and stickleback were identified. Size distributions of mapped BACs were used to calculate that the genome of sea bass may be only 1.3 fold larger than the 460 Mbp stickleback genome.ConclusionsThe BAC map is used for sequencing single BACs or BAC-pools covering defined genomic entities by second generation sequencing technologies. Together with the WGS dataset it initiates a sea bass genome sequencing project. This will allow the quantification of polymorphisms through resequencing, which is important for selecting highly performing domesticated fish