VFFINDER: A Graph-based Approach for Automated Silent Vulnerability-Fix Identification

The increasing reliance of software projects on third-party libraries has raised concerns about the security of these libraries due to hidden vulnerabilities. Managing these vulnerabilities is challenging due to the time gap between fixes and public disclosures. Moreover, a significant portion of open-source projects silently fix vulnerabilities without disclosure, impacting vulnerability management. Existing tools like OWASP heavily rely on public disclosures, hindering their effectiveness in detecting unknown vulnerabilities. To tackle this problem, automated identification of vulnerability-fixing commits has emerged. However, identifying silent vulnerability fixes remains challenging. This paper presents VFFINDER, a novel graph-based approach for automated silent vulnerability fix identification. VFFINDER captures structural changes using Abstract Syntax Trees (ASTs) and represents them in annotated ASTs. VFFINDER distinguishes vulnerability-fixing commits from non-fixing ones using attention-based graph neural network models to extract structural features. We conducted experiments to evaluate VFFINDER on a dataset of 36K+ fixing and non-fixing commits in 507 real-world C/C++ projects. Our results show that VFFINDER significantly improves the state-of-the-art methods by 39-83% in Precision, 19-148% in Recall, and 30-109% in F1. Especially, VFFINDER speeds up the silent fix identification process by up to 47% with the same review effort of 5% compared to the existing approaches.Comment: Accepted by IEEE KSE 202

Capsule network with shortcut routing

This study introduces "shortcut routing," a novel routing mechanism in capsule networks that addresses computational inefficiencies by directly activating global capsules from local capsules, eliminating intermediate layers. An attention-based approach with fuzzy coefficients is also explored for improved efficiency. Experimental results on Mnist, smallnorb, and affNist datasets show comparable classification performance, achieving accuracies of 99.52%, 93.91%, and 89.02% respectively. The proposed fuzzy-based and attention-based routing methods significantly reduce the number of calculations by 1.42 and 2.5 times compared to EM routing, highlighting their computational advantages in capsule networks. These findings contribute to the advancement of efficient and accurate hierarchical pattern representation models.Comment: 8 pages, published at IEICE Transactions on Fundamentals of Electronics Communications and Computer Sciences E104.A(8

Characterization of pig farms in Hung Yen, Hai Duong and Bac Ninh provinces

peer reviewedIn order to characterization of pig farms in the Red River Delta, a study was conducted on 90 pig farms in Hung Yen, Hai Duong and Bac Ninh provinces from June to December 2006. Results show that most of the pig farms had been built for five years with a small size (0.5 hectare per farm). The invested capital was about 300-400 millions VND per farm. Four main sow groups used in the farms included crossbred exotic sows (51.1%), crossbred sow between local and exotic breeds (14.4%), purebred Landrace and Yorkshire breeds (15.6 and 18.9%, respectively). The boars were various (Duroc 30%, Yorkshire 21%, Landrace 13%, PiÐtrain × Duroc 36% and others). The pigs farms were faced with several difficulties such as limited land, lack of invested capital, uncontrolled quality of breeding pigs, high costs of feed, poor hygiene condition and diseases

Hemorrhagic Meningioma With Symptom of Convulsion: A Rare Presentation of Parietal Meningioma

Meningioma is the most common, extra-axial, non-glial intracranial tumor with an incidence of 2.3-5.5/100 000, accounting for 20%-30% of all primary brain tumor diagnoses in adults. Meningiomas associated with intratumoral hemorrhage are very rare occurring in 0.5%-2.4%. of individuals. Herein, we report a rare case of hemorrhagic meningioma with the symptom of convulsion. The case was a 68-year-old woman admitted to the hospital with severe headache and convulsions. Computed tomography revealed an increase in heterogeneous lesion measuring 4 × 3 × 2.5 cm at the right parietal lobe. Brain magnetic resonance imaging (MRI) showed a grossly stable homogeneously enhancing extra-axial mass measuring 43 × 33 × 28 mm, small calcified peripheral, intratumoral hemorrhage. Histopathology showed a multi-celled meningioma with bleeding areas (WHO grade I)

Synthesis of Gold Nanobipyramids by Seed-mediated Method and Santibacterial Activities

Metallic nanoparticles as antibacterial agents have been studied for several years. The most used antibacterial nanoparticles are silver nanoparticles. The mechanisms and  antibacterial properties of silver nanoparticles are well known, but the effects of gold nanoparticles, especially gold Nano bipyramids, are not considered. In this research, we synthesized gold nanobipyramids (NBPs) by seed mediated method using surfactant cetyltrimethylammonium bromide (CTAB). After preparing, gold nanobipyramids is removed CTAB and modified the surface using polyethylene glycol, polyvinyl alcohol and chitosan as the stabilizers. Besides, antibacterial effects of gold nanobipyramids on both Escherichia coli (Gram negative) and Staphylococcus aureus (Gram positive) are investigated in this paper. The results show that gold nanobipyramids have good antibacterial activities even at low concentration. The optimal concentration of stabilizers and gold nanobipyramids in antibacterial activities are also studied in this paper

Microbial Characteristics of Lower Respiratory Tract Infections in Patients Referred from Primary Care Hospitals

Objective: This study investigated the microbiological characteristics of severe lower respiratory tract infection patients not respond to initial treatment, and were transferred to a tertiary-level hospital. Material and Methods: This was a multicenter, prospective study conducted across four hospitals: Cho Ray, Pham Ngoc Thach, Gia Dinh People’s Hospital, and Can Tho Central General Hospital. Sputum specimens were collected shortly after admission and subjected to culture and real-time PCR testing. Results: Out of the 252 patients, 170 (67.4%) met the criteria for analysis and identification of pathogenic microorganisms. The most frequently isolated pathogens were Streptococcus pneumoniae (S. pneumonia) and Haemophilus influenzae (H. influenzae), comprising of 27.0% and 13.1%, respectively. Antibiotic susceptibility testing was conducted on 55 patients (32.3%). Among these cases, there were 16 instances of S. pneumoniae, 10 cases of Staphylococcus aureus (S. aureus), 10 cases of Pseudomonas aeruginosa (P. aeruginosa), 14 cases of gram-negative enteric bacteria, 2 cases of H. influenzae, 1 case of Moraxella catarrhalis (M. catarrhalis), 1 case of Enterococcus faecium, and 1 case of M. pneumoniae. The antibiogram results revealed significant findings; including a 70% prevalence of extended-spectrum beta-lactamase and 90% occurrence of Methicillin-Resistant Staphylococcus aureus. The data also indicated high resistance rates; such as 90% resistance to erythromycin, 40-80% to ciprofloxacin, 30-80% to ceftazidime, and 30-40% to imipenem. Conclusion: Pathogens associated with LRTIs referred from primary care hospitals encompass S. pneumonia, H. influenza, and S. aureus. At our facility, piperacillin, imipenem, amikacin, vancomycin, and linezolid emerged as the most effective antibiotics for addressing these LRTIs

Spatiotemporal evolution of SARS-CoV-2 Alpha and Delta variants during large nationwide outbreak of COVID-19, Vietnam, 2021

We analyzed 1,303 SARS-CoV-2 whole-genome sequences from Vietnam, and found the Alpha and Delta variants were responsible for a large nationwide outbreak of COVID-19 in 2021. The Delta variant was confined to the AY.57 lineage and caused >1.7 million infections and >32,000 deaths. Viral transmission was strongly affected by nonpharmaceutical interventions

FIRST - Flexible interactive retrieval SysTem for visual lifelog exploration at LSC 2020

Lifelog can provide useful insights of our daily activities. It is essential to provide a flexible way for users to retrieve certain events or moments of interest, corresponding to a wide variation of query types. This motivates us to develop FIRST, a Flexible Interactive Retrieval SysTem, to help users to combine or integrate various query components in a flexible manner to handle different query scenarios, such as visual clustering data based on color histogram, visual similarity, GPS location, or scene attributes. We also employ personalized concept detection and image captioning to enhance image understanding from visual lifelog data, and develop an autoencoderlike approach for query text and image feature mapping. Furthermore, we refine the user interface of the retrieval system to better assist users in query expansion and verifying sequential events in a flexible temporal resolution to control the navigation speed through sequences of images

Finishing the euchromatic sequence of the human genome

The sequence of the human genome encodes the genetic instructions for human physiology, as well as rich information about human evolution. In 2001, the International Human Genome Sequencing Consortium reported a draft sequence of the euchromatic portion of the human genome. Since then, the international collaboration has worked to convert this draft into a genome sequence with high accuracy and nearly complete coverage. Here, we report the result of this finishing process. The current genome sequence (Build 35) contains 2.85 billion nucleotides interrupted by only 341 gaps. It covers ∼99% of the euchromatic genome and is accurate to an error rate of ∼1 event per 100,000 bases. Many of the remaining euchromatic gaps are associated with segmental duplications and will require focused work with new methods. The near-complete sequence, the first for a vertebrate, greatly improves the precision of biological analyses of the human genome including studies of gene number, birth and death. Notably, the human enome seems to encode only 20,000-25,000 protein-coding genes. The genome sequence reported here should serve as a firm foundation for biomedical research in the decades ahead