Protonation and sugar binding to LacY

The effect of bulk-phase pH on the apparent affinity (Kdapp) of purified wild-type lactose permease (LacY) for sugars was studied. Kdapp values were determined by ligand-induced changes in the fluorescence of either of two covalently bound fluorescent reporters positioned away from the sugar-binding site. Kdapp for three different galactopyranosides was determined over a pH range from 5.5 to 11. A remarkably high pKa of ≈10.5 was obtained for all sugars. Kinetic data for thiodigalactoside binding measured from pH 6 to 10 show that decreased affinity for sugar at alkaline pH is due specifically to increased reverse rate. A similar effect was also observed with nitrophenylgalactoside by using a direct binding assay. Because affinity for sugar remains constant from pH 5.5 to pH 9.0, it follows that LacY is fully protonated with respect to sugar binding under physiological conditions of pH. The results are consistent with the conclusion that LacY is protonated before sugar binding during lactose/H+ symport in either direction across the membrane