The propagation game: on simulatability, correlation matrices, and probing security

This work is intended for researchers in the field of side-channel attacks, countermeasure analysis, and probing security. It reports on a formalization of simulatability in terms of linear algebra properties, which we think will provide a useful tool in the practitioner toolbox. The formalization allowed us to revisit some existing definitions (such as probe isolating non-interference) in a simpler way that corresponds to the propagation of erase morphisms. From a theoretical perspective, we shed light into probabilistic definitions of simulatability and matrix-based spectral approaches. This could mean, in practice, that potentially better tools can be built. Readers will find a different, and perhaps less contrived, definition of simulatability, which could enable new forms of reasoning. This work does not cover any practical implementation of the proposed tools, which is left for future work

Evaluating Orthogonality between Application Auto-Tuning and Run-Time Resource Management for Adaptive OpenCL Applications

Abstract-The ever increasing number of processing units integrated on the same many-core chip delivers computational power that can exceed the performance requirements of a single application. The number of chips (and related power consumption) can thus be reduced to serve multiple applications -a practice which is called resource consolidation. However, this solution requires techniques to partition and assign resources among the applications and to manage unpredictable dynamic workloads. To provide the performance requirements in such scenarios, we exploit application auto-tuning, based on design-time analysis, of both application-specific dynamic knobs and computational parallelism. Such features are implemented in a software library, which is used to demonstrate the main contribution of this paper: a light-weight Run-Time Resource Management -RTRM -technique to improve resource sharing for computationally intensive OpenCL applications. We evaluate how much the interaction between RTRM and application auto-tuning can become synergistic yet orthogonal. In the proposed approach, run-time adaptation decisions are taken by each application, autonomously. This has two main advantages: i) a non-invasive application design, in terms of source code, and ii) a very low run-time overhead, since it does not require any central coordination of a supervisor nor communication between the applications. We carried out an experimental campaign by using a video processing application -an OpenCL stereo-matching implementation -and stressing out resource usage. We proved that, while RTRM is necessary to provide lower variance of the application performance, the application auto-tuning layer is fundamental to trade it off with respect to the computation accuracy

Candidate germline biomarkers of lenalidomide efficacy in mantle cell lymphoma: the FIL MCL0208 trial

In the FIL MCL0208 phase III trial, lenalidomide maintenance (LEN) after transplantation (ASCT) in mantle cell lymphoma (MCL) improved progression-free survival (PFS) vs observation (OBS). The host pharmacogenetic background was analyzed to decipher whether single nucleotide polymorphisms (SNPs) of genes encoding transmembrane transporters, metabolic enzymes, or cell surface receptors might predict drug efficacy. Genotypes were obtained by real-time polymerase chain reaction (RT-PCR) in peripheral blood (PB) germ line DNA. Polymorphisms of either ABCB1 or VEGF were found in 69% and 79% of 278 patients and predicted favorable PFS vs homozygous wild type (WT) in the LEN arm: 3-year PFS 85% vs 70% (p < 0.05) and 85% vs 60% (p < 0.01), respectively. Patients carrying both ABCB1 and VEGF WT had the poorest 3-year PFS (46%) and overall survival (OS, 76%): in fact, in these patients LEN did not improve PFS vs OBS (3-year PFS 44% vs 60%, p = 0.62). Moreover, CRBN polymorphism (n = 28) was associated with lenalidomide dose reduction or discontinuation. Finally, ABCB1, NCF4, and GSTP1 polymorphisms predicted lower hematological toxicity during induction, while ABCB1 and CRBN polymorphisms predicted lower risk of grade ≥3 infections. This study demonstrates that specific SNPs represent candidate predictive biomarkers of immunochemotherapy toxicity and LEN efficacy after ASCT in MCL. This trial is registered at eudract.ema.europa.eu as 2009-012807-25

MULTICUBE: Multi-objective design space exploration of multi-core architectures

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Physical activity measured by implanted devices predicts atrial arrhythmias and patient outcome: Results of IMPLANTED (Italian Multicentre Observational Registry on Patients With Implantable Devices Remotely Monitored)

Background--To determine whether daily physical activity (PA), as measured by implanted devices (through accelerometer sensor), was related to the risk of developing atrial arrhythmias during long-term follow-up in a population of heart failure (HF) patients with an implantable cardioverter defibrillator (ICD). Methods and Results--The study population was divided into 2 equally sized groups (PA cutoff point: 3.5 h/d) according to their mean daily PA recorded by the device during the 30- to 60-day period post-ICD implantation. Propensity score matching was used to compare 2 equally sized cohorts with similar characteristics between lower and higher activity patients. The primary end point was time free from the first atrial high-rate episode (AHRE) of duration 656 minutes. Secondary end points were: first AHRE 656 hours, first AHRE 6548 hours, and a combined end point of death or HF hospitalization. Data from 770 patients (65\ub115 years; 66% men; left ventricular ejection fraction 35\ub112%) remotely monitored for a median of 25 months were analyzed. A PA =3.5 h/d was associated with a 38% relative reduction in the risk of AHRE 656 minutes (72-month cumulative survival: 75.0% versus 68.1%; log rank P=0.025), and with a reduction in the risk of AHRE 656 hours, AHRE 6548 hours, and the combined end point of death or HF hospitalization (all P &lt; 0.05). Conclusions--In HF patients with ICD, a low level of daily PA was associated with a higher risk of atrial arrhythmias, regardless of the patients' baseline characteristics. In addition, a lower daily PA predicted death or HF hospitalization

Современное состояние электрификации России

В статье показано, что современное развитие электрификации РФ в сопоставлении с государствами, входящими в G8, очевидно недостающее. При этом есть большой потенциал электросбережения в секторах экономики. Потребление электроэнергии населением существенно находится в зависимости от значения их денежных доходов и темпов роста тарифов на электричество

The evolution of lung cancer and impact of subclonal selection in TRACERx

Lung cancer is the leading cause of cancer-associated mortality worldwide. Here we analysed 1,644 tumour regions sampled at surgery or during follow-up from the first 421 patients with non-small cell lung cancer prospectively enrolled into the TRACERx study. This project aims to decipher lung cancer evolution and address the primary study endpoint: determining the relationship between intratumour heterogeneity and clinical outcome. In lung adenocarcinoma, mutations in 22 out of 40 common cancer genes were under significant subclonal selection, including classical tumour initiators such as TP53 and KRAS. We defined evolutionary dependencies between drivers, mutational processes and whole genome doubling (WGD) events. Despite patients having a history of smoking, 8% of lung adenocarcinomas lacked evidence of tobacco-induced mutagenesis. These tumours also had similar detection rates for EGFR mutations and for RET, ROS1, ALK and MET oncogenic isoforms compared with tumours in never-smokers, which suggests that they have a similar aetiology and pathogenesis. Large subclonal expansions were associated with positive subclonal selection. Patients with tumours harbouring recent subclonal expansions, on the terminus of a phylogenetic branch, had significantly shorter disease-free survival. Subclonal WGD was detected in 19% of tumours, and 10% of tumours harboured multiple subclonal WGDs in parallel. Subclonal, but not truncal, WGD was associated with shorter disease-free survival. Copy number heterogeneity was associated with extrathoracic relapse within 1 year after surgery. These data demonstrate the importance of clonal expansion, WGD and copy number instability in determining the timing and patterns of relapse in non-small cell lung cancer and provide a comprehensive clinical cancer evolutionary data resource