Population structure and genetic differentiation among the substructured Vysya caste population in comparison to the other populations of Andhra Pradesh, India

The present paper focuses on the study of the patterns of genetic microdifferentiation among one of the substructured caste populations of Andhra Pradesh, namely Vysya, with reference to 17 other Telugu speaking populations from the same region of India. A total of 302 individuais from the three Vysya subgroups (101 of Arya Vysya, 100 from Kalinga Vysya and 101 from Thrivarnika) were typed in 17 blood groups and protein polymorphisms. Nei's gene diversity analysis, as well as neighbour-joining tree and UPGMA cluster diagrams, derived from standard genetic distances, R-matrix analysis and a regression model for investigating the patterns of external gene flow and genetic drift due to isolation under the island model, were done at two levels: (1) considering only the three Vysya populations and (2) considering common loci among 20 populations of Andhra Pradesh. Seven of the 17 systems investigated were found to be monomorphic among all the three Vysya groups. The UPGMA tree and bidimensional scaling of the D2 distances derived from R-matrix analysis show a very distinct cluster of Vysya populations. Application of the model of regression of average heterozygosity versus the distance of populations from the centroid shows the three Vysya populations placed as clear outliers above the theoretical regression line. Different approaches employed in this study give support to the hypothesis of different origin and/or demographic story for the three Vysya groups compared with other populations of Andhra Pradesh.Fil: Lakshmi, N.. Andhra University; IndiaFil: Demarchi, Dario. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Antropología de Córdoba. Universidad Nacional de Córdoba. Facultad de Filosofía y Humanidades. Instituto de Antropología de Córdoba; ArgentinaFil: Veerraju, P.. Andhra University; IndiaFil: Rao, T. V.. Andhra University; Indi

A Novel Approach Based on Decreased Dimension and Reduced Gray Level Range Matrix Features for Stone Texture Classification

The human eye can easily identify the type of textures in flooring of the houses and in the digital images visually.  In this work, the stone textures are grouped into four categories. They are bricks, marble, granite and mosaic. A novel approach is developed for decreasing the dimension of stone image and for reducing the gray level range of the image without any loss of significant feature information. This model is named as “Decreased Dimension and Reduced Gray level Range Matrix (DDRGRM)” model. The DDRGRM model consists of 3 stages.  In stage 1, each 5×5 sub dimension of the stone image is reduced into 2×2 sub dimension without losing any important qualities, primitives, and any other local stuff.  In stage 2, the gray level of the image is reduced from 0-255 to 0-4 by using fuzzy concepts.  In stage 3, Co-occurrence Matrix (CM) features are derived from the DDRGRM model of the stone image for stone texture classification.  Based on the feature set values, a user defined algorithm is developed to classify the stone texture image into one of the 4 categories i.e. Marble, Brick, Granite and Mosaic. The proposed method is tested by using the K-Nearest Neighbor Classification algorithm with the derived texture features.  To prove the efficiency of the proposed method, it is tested on different stone texture image databases.  The proposed method resulted in high classification rate when compared with the other existing methods

Insertion/Deletion Polymorphisms in Indian Tribal Populations

Five Alu markers (Alu APO, PV 92, TPA 25, D1 and ACE) were studied in five tribal populations namely, Konda Reddi, Koya Dora and Konda Kammara of East Godavari district, Lambada and Chenchu of Mahaboobnagar district of Andhra Pradesh. All the five loci were found to be highly polymorphic. While the lowest heterozygosity was observed in the Chenchu the Lambadi shows the highest. Both Neighbour Joining tree and Principal Component analysis based on genetic distances suggest two broad clusters, one formed by the Lambada and Chenchu and the other by the Konda Reddi and Koya Dora with Konda Kammara as an outer element to this three-point cluster. Another cluster analysis carried out along with 19 other Indian populations brings out no distinct cluster of the 5 AP tribes; instead these AP tribal populations are integrated into different subclusters of the UP and Bengal suggesting lack of distinct genetic identity of these AP tribes as far as the few Alu markers are concerned.Fil: Veerraju, P.. Andhra University; IndiaFil: Demarchi, Dario. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Antropología de Córdoba. Universidad Nacional de Córdoba. Facultad de Filosofía y Humanidades. Instituto de Antropología de Córdoba; ArgentinaFil: Lakshmi, N.. Andhra University; IndiaFil: Venkateswara Rao, T.. Andhra University; Indi

Opportunity for natural selection among three endogamous subpopulations of Andhra Pradesh

The Crow′s index of opportunity for natural selection has been calculated for three endogamous subpopulations namely Arya Vysya, Thrivarnika and Kalinga Vysya of North Coastal Andhra Pradesh. The total index is in the order Arya Vysya > Thrivarnika > Kalinga Vysya. However, the mortality component is more in Kalinga Vysya, reflecting the poor medical facilities available to them due to their low socio- economic profile compared to other two populations. The results of the present study are compared with those among the other caste populations of Andhra Pradesh

Opportunity for natural selection among three endogamous subpopulations of Andhra Pradesh

The Crow′s index of opportunity for natural selection has been calculated for three endogamous subpopulations namely Arya Vysya, Thrivarnika and Kalinga Vysya of North Coastal Andhra Pradesh. The total index is in the order Arya Vysya > Thrivarnika > Kalinga Vysya. However, the mortality component is more in Kalinga Vysya, reflecting the poor medical facilities available to them due to their low socio- economic profile compared to other two populations. The results of the present study are compared with those among the other caste populations of Andhra Pradesh

Selection intensity among Kshatriyas an endogamous population of Andhra Pradesh

Opportunity for natural selection has been studied among the women of Kshatriya caste population from rural and urban areas of north coastal Andhra Pradesh. The urbanrural difference for different demographic characteristics is not significant. The contribution of fertility component for both Crow's index and Jonston and Kensinger's index is more. The present study is compared with other Andhra populations. The decreased mortality differentials in Kshatriyas suggest that this component was directly affected by the better socio-economic level and reflects on the population's transitional phase

Blood group and serum protein polymorphisms in Turpu Kapu population of Vizianagaram District, Andhra Pradesh

Data on two blood group and three serum protein polymorphisms of the Turpu Kapu, an endogamous population of Vizianagaram District, Andhra Pradesh (AP) is presented. The gene frequencies for the blood group systems ABO and Rh are within the ranges of distribution reported earlier among the caste populations of Andhra Pradesh. The study population shows highest frequency of Hp1 allele and the lowest frequency of Hp2 allele compared to the other populations of AP. The Cp system is monomorphic, all individuals being the BB type. The GC system exhibits polymorphism with the gene frequencies of GC1 and GC2 alleles showing the highest and lowest frequencies, respectively, as compared to the caste populations reported earlier. The χ2 test suggest that this population is in Hardy-Weinberg Equilibrium