327 research outputs found
Recovery of protein synthesis to assay DNA repair activity in transcribed genes in living cells and tissues
Transcription-coupled nucleotide excision repair (TC-NER) is an important DNA repair mechanism that protects against the negative effects of transcription-blocking DNA lesions. Hereditary TC-NER deficiencies cause pleiotropic and often severe neurodegenerative and progeroid symptoms. While multiple assays have been developed to determine TC-NER activity for clinical and research purposes, monitoring TC-NER is hampered by the low frequency of repair events occurring in transcribed DNA. ’Recovery of RNA Synthesis’ is widely used as indirect TC-NER assay based on the notion that lesion-blocked transcription only resumes after successful TC-NER. Here, we show that measuring novel synthesis of a protein after its compound-induced degradation prior to DNA damage induction is an equally effective but more versatile manner to indirectly monitor DNA repair activity in transcribed genes. This ‘Recovery of Protein Synthesis’ (RPS) assay can be adapted to various degradable proteins and readouts, including imaging and immunoblotting. Moreover, RPS allows real-time monitoring of TC-NER activity in various living cells types and even in differentiated tissues of living organisms. To illustrate its utility, we show that DNA repair in transcribed genes declines in aging muscle tissue of C. elegans. Therefore, the RPS assay constitutes an important novel clinical and research tool to investigate transcription-coupled DNA repair
Groene diensten in nationale landschappen : potenties bij een veranderende landbouw
De landbouw is voor een belangrijk deel drager van het landschap in Nationale Landschappen. Dit rapport verkent de betekenis van groene diensten door de landbouw, tegen de achtergrond van verschillende ontwikkelingsrichtingen in die landbouw (schaalvergroting - verbreding). Twee kwalitatieve visies worden ontwikkeld aan de hand van al bestaande scenariostudies (de zogenaamde CPB-scenario’s), een analyse van instrumenten van groene diensten in nationaal en internationaal verband en een discussiemiddag. Beide visies laten ontwikkelingsrichtingen van Nationale landschappen zien en werken de rol van groene diensten door de landbouw verder uit. Deze rol wordt uitgewerkt aan de hand van een raamwerk over de organisatie van groene diensten en een analyse van de te realiseren kernkwaliteiten in Nationale Landschappen
Biomassa-afhankelijk doseren van gewasbeschermingsmiddelen
Recentelijk zijn enkele doorbraken gerealiseerd op het gebied van biomassa-afhankelijk doseren in open teelten. Het gaat hierbij om plaatsspecifieke dosering van bepaalde herbiciden en fungiciden op basis van de hoeveelheid bovengrondse biomassa onder de spuitdoppen. Om dit effectief te maken, zijn toegesneden sensoren, beslisregels en spuitapparatuur nodig. Plaatsspecifieke dosering van loofdodingsmiddelen in consumptieaardappelen is nu praktijkrijp middels MLHD-PHK (Minimum Lethal Herbicide Dose-Potato Haulm Killing) in combinatie met de N-sensor (stikstof-sensor), of SensiSpray. In de testfase werd een reductie van gemiddeld 50% in het gebruik van loofdodingsmiddel t.o.v. gangbare praktijk bereikt. In dit artikel wordt een overzicht gegeven van onderwerpen op het gebied van biomassa-afhankelijk doseren van gewasbeschermingsmiddelen waarbij de Plant Science Groep (PSG) van Wageningen UR trekker van de ontwikkeling is
Effecten van bijmesten op kwaliteit van biologisch geteelde tomaten : proeven op vier bedrijven in 2003 in het kader van Biokas
After Nerve Injury, Lineage Tracing Shows That Myelin and Remak Schwann Cells Elongate Extensively and Branch to Form Repair Schwann Cells, Which Shorten Radically on Remyelination
There is consensus that, distal to peripheral nerve injury, myelin and Remak cells reorganize to form cellular columns, Bungner's bands, which are indispensable for regeneration. However, knowledge of the structure of these regeneration tracks has not advanced for decades and the structure of the cells that form them, denervated or repair Schwann cells, remains obscure. Furthermore, the origin of these cells from myelin and Remak cells and their ability to give rise to myelin cells after regeneration has not been demonstrated directly, although these conversions are believed to be central to nerve repair. Using genetic lineage-tracing and scanning-block face electron microscopy, we show that injury of sciatic nerves from mice of either sex triggers extensive and unexpected Schwann cell elongation and branching to form long, parallel processes. Repair cells are 2- to 3-fold longer than myelin and Remak cells and 7- to 10-fold longer than immature Schwann cells. Remarkably, when repair cells transit back to myelinating cells, they shorten ∼7-fold to generate the typically short internodes of regenerated nerves. The present experiments define novel morphological transitions in injured nerves and show that repair Schwann cells have a cell-type-specific structure that differentiates them from other cells in the Schwann cell lineage. They also provide the first direct evidence using genetic lineage tracing for two basic assumptions in Schwann cell biology: that myelin and Remak cells generate the elongated cells that build Bungner bands in injured nerves and that such cells can transform to myelin cells after regeneration
Cross-National Logo Evaluation Analysis: An Individual Level Approach
The universality of design perception and response is tested using data collected from ten countries: Argentina, Australia, China, Germany, Great Britain, India, the Netherlands, Russia, Singapore, and the United States. A Bayesian, finite-mixture, structural-equation model is developed that identifies latent logo clusters while accounting for heterogeneity in evaluations. The concomitant variable approach allows cluster probabilities to be country specific. Rather than a priori defined clusters, our procedure provides a posteriori cross-national logo clusters based on consumer response similarity. To compare the a posteriori cross-national logo clusters, our approach is integrated with Steenkamp and Baumgartner’s (1998) measurement invariance methodology. Our model reduces the ten countries to three cross-national clusters that respond differently to logo design dimensions: the West, Asia, and Russia. The dimensions underlying design are found to be similar across countries, suggesting that elaborateness, naturalness, and harmony are universal design dimensions. Responses (affect, shared meaning, subjective familiarity, and true and false recognition) to logo design dimensions (elaborateness, naturalness, and harmony) and elements (repetition, proportion, and parallelism) are also relatively consistent, although we find minor differences across clusters. Our results suggest that managers can implement a global logo strategy, but they also can optimize logos for specific countries if desired.adaptation;standardization;Bayesian;international marketing;design;Gibbs sampling;concomitant variable;logos;mixture models;structural equation models
Duurzame bedrijfsvoering : een analyse van de besluitvorming bij gewasbescherming en watergift en bemesting in de komkommer- en chrysantenteelt
The Multidimensional Study of Viral Campaigns as Branching Processes
Viral campaigns on the Internet may follow variety of models, depending on
the content, incentives, personal attitudes of sender and recipient to the
content and other factors. Due to the fact that the knowledge of the campaign
specifics is essential for the campaign managers, researchers are constantly
evaluating models and real-world data. The goal of this article is to present
the new knowledge obtained from studying two viral campaigns that took place in
a virtual world which followed the branching process. The results show that it
is possible to reduce the time needed to estimate the model parameters of the
campaign and, moreover, some important aspects of time-generations relationship
are presented.Comment: In proceedings of the 4th International Conference on Social
Informatics, SocInfo 201
Studying Paths of Participation in Viral Diffusion Process
Authors propose a conceptual model of participation in viral diffusion
process composed of four stages: awareness, infection, engagement and action.
To verify the model it has been applied and studied in the virtual social chat
environment settings. The study investigates the behavioral paths of actions
that reflect the stages of participation in the diffusion and presents
shortcuts, that lead to the final action, i.e. the attendance in a virtual
event. The results show that the participation in each stage of the process
increases the probability of reaching the final action. Nevertheless, the
majority of users involved in the virtual event did not go through each stage
of the process but followed the shortcuts. That suggests that the viral
diffusion process is not necessarily a linear sequence of human actions but
rather a dynamic system.Comment: In proceedings of the 4th International Conference on Social
Informatics, SocInfo 201
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