30 research outputs found

    Anaerobiosis revisited: growth of Saccharomyces cerevisiae under extremely low oxygen availability

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    The budding yeast Saccharomyces cerevisiae plays an important role in biotechnological applications, ranging from fuel ethanol to recombinant protein production. It is also a model organism for studies on cell physiology and genetic regulation. Its ability to grow under anaerobic conditions is of interest in many industrial applications. Unlike industrial bioreactors with their low surface area relative to volume, ensuring a complete anaerobic atmosphere during microbial cultivations in the laboratory is rather difficult. Tiny amounts of O2 that enter the system can vastly influence product yields and microbial physiology. A common procedure in the laboratory is to sparge the culture vessel with ultrapure N2 gas; together with the use of butyl rubber stoppers and norprene tubing, O2 diffusion into the system can be strongly minimized. With insights from some studies conducted in our laboratory, we explore the question ‘how anaerobic is anaerobiosis?’. We briefly discuss the role of O2 in non-respiratory pathways in S. cerevisiae and provide a systematic survey of the attempts made thus far to cultivate yeast under anaerobic conditions. We conclude that very few data exist on the physiology of S. cerevisiae under anaerobiosis in the absence of the anaerobic growth factors ergosterol and unsaturated fatty acids. Anaerobicity should be treated as a relative condition since complete anaerobiosis is hardly achievable in the laboratory. Ideally, researchers should provide all the details of their anaerobic set-up, to ensure reproducibility of results among different laboratories. A correction to this article is available online at http://eprints.whiterose.ac.uk/131930/ https://doi.org/10.1007/s00253-018-9036-

    Influence of contrast enhancement and pseudocolor transformation on the diagnosis with digital subtraction images (DSI).

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    This study evaluated the influence of the image processing step of digital subtraction images on inter- and intraexaminer agreement in the interpretation of alveolar bone changes. 52 pairs of standardized radiographs from various clinical trials were included. Six dentists were invited to interpret the images projected as slides in random order. Display one demonstrated the slide of the digitized baseline radiograph and the follow-up image. Display two showed the regular digital subtraction image. Display three represented a grey level contrast enhanced version and displays four and five were pseudo/color enhanced subtraction images. Applying kappa-statistics and multiple regression analysis it was demonstrated that better agreements were obtained when the two color coded displays of subtraction images were shown to the interpreters. The image interpretation was performed in two series. For the first evaluation the interpreters were not informed about the therapy provided nor the time elapsed between taking the pairs of standardized radiographs. In the second series this information was provided. It could be demonstrated that the agreement in the diagnosis of bone change was less influenced by the knowledge about the clinical information if the two color-converted versions of subtracted images were evaluated. Thus, it was concluded that image processing of subtraction images using color enhancement might improve agreement in the diagnostic task. The color coded images were less influenced by the bias in the interpretation of an expected change. The decision making process might be more objective when using color enhanced subtraction images.link_to_subscribed_fulltex
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