Creating Open Digital Library Using XML: Implementation of OAi-PMH Protocol at CERN

This article describes the implementation of the OAi-PMH protocol within the CERN Document Server (CDS). In terms of the protocol, CERN acts both as a data provider and service provider and the two core applications are described. The application of XML Schema and XSLT technology is emphasized

Learning from accidents: Analysis of multi-attribute events and implications to improve design and reduce human errors

High-technology accidents are likely to occur under a complex interaction of multiple active failures and latent conditions, and recent major accidents investigations are increasingly highlighting the role of human error or human-related factors as significant contributors. Latent conditions might have long incubation periods, which implies that a number of design failures may be embedded in systems until human errors trigger an accident sequence. Consequently, there is a need to scrutinise the relationship between enduring design deficiencies and human erroneous actions as a conceivable way to minimise accidents. This study will tackle this complex problem by applying an artificial neural network approach to a proprietary multi-attribute accident dataset, in order to disclose multidimensional relationships between human errors and design failures. Clustering and data mining results are interpreted to offer further insight into the latent conditions embedded in design. Implications to support the development of design failure prevention schemes are then discussed

Nonuniform Neutron-Rich Matter and Coherent Neutrino Scattering

Nonuniform neutron-rich matter present in both core-collapse supernovae and neutron-star crusts is described in terms of a semiclassical model that reproduces nuclear-matter properties and includes long-range Coulomb interactions. The neutron-neutron correlation function and the corresponding static structure factor are calculated from molecular dynamics simulations involving 40,000 to 100,000 nucleons. The static structure factor describes coherent neutrino scattering which is expected to dominate the neutrino opacity. At low momentum transfers the static structure factor is found to be small because of ion screening. In contrast, at intermediate momentum transfers the static structure factor displays a large peak due to coherent scattering from all the neutrons in a cluster. This peak moves to higher momentum transfers and decreases in amplitude as the density increases. A large static structure factor at zero momentum transfer, indicative of large density fluctuations during a first-order phase transition, may increase the neutrino opacity. However, no evidence of such an increase has been found. Therefore, it is unlikely that the system undergoes a simple first-order phase transition. It is found that corrections to the commonly used single heavy nucleus approximation first appear at a density of the order of $10^{13}$ g/cm$^3$ and increase rapidly with increasing density. Thus, neutrino opacities are overestimated in the single heavy nucleus approximation relative to the complete molecular dynamics simulations.Comment: 17 pages, 23 included ps figure

Self-Consistent Separable Rpa Approach for Skyrme Forces: Axial Nuclei

The self-consistent separable RPA (random phase approximation) method is formulated for Skyrme forces with pairing. The method is based on a general self-consistent procedure for factorization of the two-body interaction. It is relevant for various density- and current-dependent functionals. The contributions of the time-even and time-odd Skyrme terms as well as of the Coulomb and pairing terms to the residual interaction are taken self-consistently into account. Most of the expression have a transparent analytical form, which makes the method convenient for the treatment and analysis. The separable character of the residual interaction allows to avoid diagonalization of high-rank RPA matrices and thus to minimize the calculation effort. The previous studies have demonstrated high numerical accuracy and efficiency of the method for spherical nuclei. In this contribution, the method is specified for axial nuclei. We provide systematic and detailed presentation of formalism and discuss different aspects of the model.Comment: 42 page

All-electron GW calculation based on the LAPW method: application to wurtzite ZnO

We present a new, all-electron implementation of the GW approximation and apply it to wurtzite ZnO. Eigenfunctions computed in the local-density approximation (LDA) by the full-potential linearized augmented-plane-wave (LAPW) or the linearized muffin-tin-orbital (LMTO) method supply the input for generating the Green function G and the screened Coulomb interaction W. A mixed basis is used for the expansion of W, consisting of plane waves in the interstitial region and augmented-wavefunction products in the augmentation-sphere regions. The frequency-dependence of the dielectric function is computed within the random-phase approximation (RPA), without a plasmon-pole approximation. The Zn 3d orbitals are treated as valence states within the LDA; both core and valence states are included in the self-energy calculation. The calculated bandgap is smaller than experiment by about 1eV, in contrast to previously reported GW results. Self-energy corrections are orbital-dependent, and push down the deep O 2s and Zn 3d levels by about 1eV relative to the LDA. The d level shifts closer to experiment but the size of shift is underestimated, suggesting that the RPA overscreens localized states.Comment: 10 pages, 3 figures, submitted to Phys. Rev.

Expression of somatostatin receptors 2 and 5 in circulating tumour cells from patients with neuroendocrine tumours.

BACKGROUND: Neuroendocrine tumours (NET) overexpress somatostatin receptors (SSTR) that can be targeted for therapy. Somatostatin receptor expression is routinely measured by molecular imaging but the resolution is insufficient to define heterogeneity. We hypothesised that SSTR expression could be measured on circulating tumour cells (CTCs) and used to investigate heterogeneity of expression and track changes during therapy. METHODS: MCF-7 cells were transfected with SSTR2 or 5 and spiked into donor blood for analysis by CellSearch. Optimum anti-SSTR antibody concentration and exposure time were determined, and flow cytometry was used to evaluate assay sensitivity. For clinical evaluation, blood was analysed by CellSearch, and SSTR2/5 immunohistochemistry was performed on matched tissue samples. RESULTS: Flow cytometry confirmed CellSearch was sensitive and that detection of SSTR was unaffected by the presence of somatostatin analogue up to a concentration of 100 ng ml(-l). Thirty-one NET patients were recruited: grade; G1 (29%), G2 (45%), G3 (13%), primary site; midgut (58%), pancreatic (39%). Overall, 87% had SSTR-positive tumours according to somatostatin receptor scintigraphy or 68-Ga-DOTATE PET/CT. Circulating tumour cells were detected in 21 out of 31 patients (68%), of which 33% had evidence of heterogeneous expression of either SSTR2 (n=5) or SSTR5 (n=2). CONCLUSIONS: Somatostatin receptors 2 and 5 are detectable on CTCs from NET patients and may be a useful biomarker for evaluating SSTR-targeted therapies and this is being prospectively evaluated in the Phase IV CALMNET trial (NCT02075606)

Handbook of methods for risk-based analysis of technical specifications

Technical Specifications (TS) requirements for nuclear power plants define the Limiting Conditions for Operations (LCOs) and Surveillance Requirements (SRs) to assure safety during operation. In general, these requirements are based on deterministic analyses and engineering judgments. Improvements in these requirements are facilitated by the availability of plant-specific Probabilistic Risk Assessments (PRAs). The US Nuclear Regulatory Commission (USNRC) Office of Research sponsored research to develop systematic, risk-based methods to improve various aspects of TS requirements. A handbook of methods summarizing such risk-based approaches has been completed in 1994. It is expected that this handbook will provide valuable input to NRC`s present work in developing guidance for using PRA in risk-informed regulation. The handbook addresses reliability and risk-based methods for evaluating allowed outage times (AOTs), action statements requiring shutdown where shutdown risk may be substantial, surveillance test intervals (STIs), managing plant configurations, and scheduling maintenance

Title: Ex vivo coronary stent implantation evaluated with digital image correlation

Abstract: Intracoronary stenting (PCI) has become standard revascularization technique to reopen blocked arteries. Although significant progress in stenting technology and implantation techniques has been made a number of problems remain. Specifically, stent sizing and inflation pressures are still a matter of scientific debates. Despite a large number of biomechanical computational simulations experimental data are rare, likely due to technical difficulties to measure dilatation pressures and coronary dimensions in the same settings. Our study shows that valuable data can be obtained by employing digital image correlation for 3D strain measurement during stent inflation ex-vivo that can provide further insight into the stent-artery wall interactions. Keywords: Artery wall-stent interaction; coronary stent; digital image correlation; experimental implantation; strain. 3 Abstract/Introduction Intracoronary stenting (PCI) has become standard revascularization technique to reopen blocked arteries. Although significant progress in stenting technology and implantation techniques has been made a number of problems remain Despite a large number of biomechanical computational simulations [3, Methods Stent and PCI equipment The balloon-expandable CoCr coronary stent Kaname TM (Terumo Corporation, Tokyo, Japan) with nominal diameter 3.5 mm, and length 15 mm (at pressure 0.9 MPa; and diameter 3.73 mm at 1.6 MPa) was used in this study. The stent was premounted on PCI dilatation catheter RX-2 (Terumo Corporation). Sample The sample of the main branch of the left coronary artery was obtained from autopsy. The male donor was 40 years old and atherosclerotic lesions were presented inside the sample. The experiment was performed 70 hours post mortem. Experiment The sample was mounted into the experimental setup ( Displacement measurement was based on 3D digital image correlation (DIC) conducted with commercial system Dantec Q-450 (Dantec Dynamics, Ulm, Germany). 4 DIC is non-contact optical method based on the stereoscopic principle which is becoming more popular especially within the strain measurement of geometrically nonuniform objects. The algorithm identifies material points on the object surface and the correlation between consecutive images allows material point tracking. Detailed description can be found in the literature The artery was recorded with two digital cameras (NanoSens Mk III, Dantec Dynamics; 1MPx CCD chip; lens Sigma EX, 105 mm, 1:2.8 D Macro) during the balloon expansion (sampling rate 25 Hz). In fully expanded state, the object ROI approx. 18*3 mm*mm was projected onto 600*300 px*px (in each camera). RX2 manometer was recorded with another camera to obtain time course of change of the balloon distending pressure (pressure transducer connected with PC was not available at the time of experiment). The stent was deployed within manual pressurization up to 1.6 MPa which spanned approximately 42 seconds. Results DIC revealed significant overloading of the artery by the expanded stent. The results are depicted in Principal strains' distribution (Green-Lagrange strain is considered within this study) shows artery response within maximally expanded stent. Principal vectors are predominantly aligned with the circumferential and longitudinal direction which is supposed to be the consequence of the cylindrical stent expansion. Circumferential deformation attains 0.5 mm/mm at the peak value which is far beyond physiological situation. The circumferential strain concentration appears non-symmetrically with respect to the length of the sample which is supposed to be the result of irregular reference geometry (an asymmetrical partially occluded lumen of the artery). Six points (P1-6) were chosen to illustrate specific strain values resulting from different loading conditions and atherosclerotic specimen in our experiment. Discussion This is a preliminary report concerning a stent implantation in ex-vivo settings employing a human coronary artery harvested from autopsy. The results suggest that 3D DIC is promising tool suitable for the evaluation of ex-vivo stent implantation potentially useful for validation of computational models and clinical considerations. Presented results suggest that overexpansion of a stent during deployment may overstretch the target site potentially resulting in implantation injury associated with restenosis and/or intimal tears associated with dissections. To obtain exact intraluminal dimensions during stent deployment optical coherence tomography or intravascular ultrasound (IVUS) would be required, currently not available in our laboratory. Nevertheless we plan to combine IVUS with 3D DIC in future experiments

Programmed cell death induced by high levels of cytokinin in Arabidopsis cultured cells is mediated by the cytokinin receptor CRE1/AHK4

High levels of cytokinins (CKs) induce programmed cell death (PCD) both in animals and plant cells. High levels of the CK benzylaminopurine (BA) induce PCD in cultured cells of Arabidopsis thaliana by accelerating a senescence process characterized by DNA laddering and expression of a specific senescence marker. In this report, the question has been addressed whether members of the small family of Arabidopsis CK receptors (AHK2, AHK3, CRE1/AHK4) are required for BA-induced PCD. In this respect, suspension cell cultures were produced from selected receptor mutants. Cell growth and proliferation of all receptor mutant and wild-type cell cultures were similar, showing that the CK receptors are not required for these processes in cultured cells. The analysis of CK metabolites instead revealed differences between wild-type and receptor mutant lines, and indicated that all three receptors are redundantly involved in the regulation of the steady-state levels of isopentenyladenine- and trans-zeatin-type CKs. By contrast, the levels of cis-zeatin-type CKs were controlled mainly by AHK2 and AHK3. To study the role of CK receptors in the BA-induced PCD pathway, cultured cells were analysed for their behaviour in the presence of high levels of BA. The results show that CRE1/AHK4, the strongest expressed CK receptor gene of this family in cultured cells, is required for PCD, thus linking this process to the known CK signalling pathway