Stokes trapping and planet formation

It is believed that planets are formed by aggregation of dust particles suspended in the turbulent gas forming accretion disks around developing stars. We describe a mechanism, termed 'Stokes trapping', by which turbulence limits the growth of aggregates of dust particles, so that their Stokes number (defined as the ratio of the damping time of the particles to the Kolmogorov dissipation timescale) remains close to unity. We discuss possible mechanisms for avoiding this barrier to further growth. None of these is found to be satisfactory and we introduce a new theory which does not involve the growth of small clusters of dust grains.Comment: 30 pages, 4 figures. Revised version has improved concluding remarks, extended discussion of sticking velocit

The Quantum-Classical Crossover in the Adiabatic Response of Chaotic Systems

The autocorrelation function of the force acting on a slow classical system, resulting from interaction with a fast quantum system is calculated following Berry-Robbins and Jarzynski within the leading order correction to the adiabatic approximation. The time integral of the autocorrelation function is proportional to the rate of dissipation. The fast quantum system is assumed to be chaotic in the classical limit for each configuration of the slow system. An analytic formula is obtained for the finite time integral of the correlation function, in the framework of random matrix theory (RMT), for a specific dependence on the adiabatically varying parameter. Extension to a wider class of RMT models is discussed. For the Gaussian unitary and symplectic ensembles for long times the time integral of the correlation function vanishes or falls off as a Gaussian with a characteristic time that is proportional to the Heisenberg time, depending on the details of the model. The fall off is inversely proportional to time for the Gaussian orthogonal ensemble. The correlation function is found to be dominated by the nearest neighbor level spacings. It was calculated for a variety of nearest neighbor level spacing distributions, including ones that do not originate from RMT ensembles. The various approximate formulas obtained are tested numerically in RMT. The results shed light on the quantum to classical crossover for chaotic systems. The implications on the possibility to experimentally observe deterministic friction are discussed.Comment: 26 pages, including 6 figure

Structure of purine nucleoside phosphorylase (DeoD) from Bacillus anthracis

Protein structures from the causative agent of anthrax (Bacillus anthracis) are being determined as part of a structural genomics programme. Amongst initial candidates for crystallographic analysis are enzymes involved in nucleotide biosynthesis, since these are recognized as potential targets in antibacterial therapy. Purine nucleoside phosphorylase is a key enzyme in the purine-salvage pathway. The crystal structure of purine nucleoside phosphorylase (DeoD) from B. anthracis has been solved by molecular replacement at 2.24 Å resolution and refined to an R factor of 18.4%. This is the first report of a DeoD structure from a Gram-positive bacterium

Bacillus subtilis regulatory protein GerE

GerE is the latest-acting of a series of factors which regulate gene expression in the mother cell during sporulation in Bacillus. The gene encoding GerE has been cloned from B. subtilis and overexpressed in Escherichia coli. Purified GerE has been crystallized by the hanging-drop vapour-diffusion method using polyethylene glycol as a precipitant. The small plate-like crystals belong to the monoclinic space group C2 and diffract beyond 2.2 Angstrom resolution with a synchrotron radiation X-ray source

Anomalous flux-flow dynamics in layered type-II superconductors at low temperatures

Low-temperature dissipation due to vortex motion in strongly anisotropic type-II superconductors with a moderate disorder ($\Delta^2/E_F \ll \hbar/\tau \ll \Delta$) is shown to be determined by the Zener-type transitions between the localized electronic states in the vortex core. Statistics of these levels is described by the random matrix ensemble of the class C defined recently by Atland and Zirnbauer [cond-mat/9602137], so the vortex motion leads naturally to the new example of a parametric statistics of energy levels. The flux-flow conductivity $\sigma_{xx}$ is a bit lower than the quasiclassical one and {\it grows} slowly with the increase of the electric field.Comment: 4 pages, Revte

Attempted Bethe ansatz solution for one-dimensional directed polymers in random media

We study the statistical properties of one-dimensional directed polymers in a short-range random potential by mapping the replicated problem to a many body quantum boson system with attractive interactions. We find the full set of eigenvalues and eigenfunctions of the many-body system and perform the summation over the entire spectrum of excited states. The analytic continuation of the obtained exact expression for the replica partition function from integer to non-integer replica parameter N turns out to be ambiguous. Performing the analytic continuation simply by assuming that the parameter N can take arbitrary complex values, and going to the thermodynamic limit of the original directed polymer problem, we obtain the explicit universal expression for the probability distribution function of free energy fluctuations.Comment: 32 pages, 1 figur

Higher Order Correlations in Quantum Chaotic Spectra

The statistical properties of the quantum chaotic spectra have been studied, so far, only up to the second order correlation effects. The numerical as well as the analytical evidence that random matrix theory can successfully model the spectral fluctuatations of these systems is available only up to this order. For a complete understanding of spectral properties it is highly desirable to study the higher order spectral correlations. This will also inform us about the limitations of random matrix theory in modelling the properties of quantum chaotic systems. Our main purpose in this paper is to carry out this study by a semiclassical calculation for the quantum maps; however results are also valid for time-independent systems.Comment: Revtex, Four figures (Postscript files), Phys. Rev E (in press

Super-diffusion in optical realizations of Anderson localization

We discuss the dynamics of particles in one dimension in potentials that are random both in space and in time. The results are applied to recent optics experiments on Anderson localization, in which the transverse spreading of a beam is suppressed by random fluctuations in the refractive index. If the refractive index fluctuates along the direction of the paraxial propagation of the beam, the localization is destroyed. We analyze this broken localization, in terms of the spectral decomposition of the potential. When the potential has a discrete spectrum, the spread is controlled by the overlap of Chirikov resonances in phase space. As the number of Fourier components is increased, the resonances merge into a continuum, which is described by a Fokker-Planck equation. We express the diffusion coefficient in terms of the spectral intensity of the potential. For a general class of potentials that are commonly used in optics, the solutions of the Fokker-Planck equation exhibit anomalous diffusion in phase space, implying that when Anderson localization is broken by temporal fluctuations of the potential, the result is transport at a rate similar to a ballistic one or even faster. For a class of potentials which arise in some existing realizations of Anderson localization atypical behavior is found.Comment: 11 pages, 2 figure

Caustics in turbulent aerosols

Networks of caustics can occur in the distribution of particles suspended in a randomly moving gas. These can facilitate coagulation of particles by bringing them into close proximity, even in cases where the trajectories do not coalesce. We show that the long-time morphology of these caustic patterns is determined by the Lyapunov exponents lambda_1, lambda_2 of the suspended particles, as well as the rate J at which particles encounter caustics. We develop a theory determining the quantities J, lambda_1, lambda_2 from the statistical properties of the gas flow, in the limit of short correlation times.Comment: 4 pages, 3 figure