Modeling dust mineralogical composition: sensitivity to soil mineralogy atlases and their expected climate impacts

Soil dust aerosols are a key component of the climate system, as they interact with short- and long-wave radiation, alter cloud formation processes, affect atmospheric chemistry and play a role in biogeochemical cycles by providing nutrient inputs such as iron and phosphorus. The influence of dust on these processes depends on its physicochemical properties, which, far from being homogeneous, are shaped by its regionally varying mineral composition. The relative amount of minerals in dust depends on the source region and shows a large geographical variability. However, many state-of-the-art Earth system models (ESMs), upon which climate analyses and projections rely, still consider dust mineralogy to be invariant. The explicit representation of minerals in ESMs is more hindered by our limited knowledge of the global soil composition along with the resulting size-resolved airborne mineralogy than by computational constraints. In this work we introduce an explicit mineralogy representation within the state-of-the-art Multiscale Online Nonhydrostatic AtmospheRe CHemistry (MONARCH) model. We review and compare two existing soil mineralogy datasets, which remain a source of uncertainty for dust mineralogy modeling and provide an evaluation of multiannual simulations against available mineralogy observations. Soil mineralogy datasets are based on measurements performed after wet sieving, which breaks the aggregates found in the parent soil. Our model predicts the emitted particle size distribution (PSD) in terms of its constituent minerals based on brittle fragmentation theory (BFT), which reconstructs the emitted mineral aggregates destroyed by wet sieving. Our simulations broadly reproduce the most abundant mineral fractions independently of the soil composition data used. Feldspars and calcite are highly sensitive to the soil mineralogy map, mainly due to the different assumptions made in each soil dataset to extrapolate a handful of soil measurements to arid and semi-arid regions worldwide. For the least abundant or more difficult-to-determine minerals, such as iron oxides, uncertainties in soil mineralogy yield differences in annual mean aerosol mass fractions of up to ∼ 100 %. Although BFT restores coarse aggregates including phyllosilicates that usually break during soil analysis, we still identify an overestimation of coarse quartz mass fractions (above 2 µm in diameter). In a dedicated experiment, we estimate the fraction of dust with undetermined composition as given by a soil map, which makes up ∼ 10 % of the emitted dust mass at the global scale and can be regionally larger. Changes in the underlying soil mineralogy impact our estimates of climate-relevant variables, particularly affecting the regional variability of the single-scattering albedo at solar wavelengths or the total iron deposited over oceans. All in all, this assessment represents a baseline for future model experiments including new mineralogical maps constrained by high-quality spaceborne hyperspectral measurements, such as those arising from the NASA Earth Surface Mineral Dust Source Investigation (EMIT) mission.</p

Direct radiative effects during intense Mediterranean desert dust outbreaks

The direct radiative effect (DRE) during 20 intense and widespread dust outbreaks, which affected the broader Mediterranean basin over the period March 2000–February 2013, has been calculated with the NMMB-MONARCH model at regional (Sahara and European continent) and short-term temporal (84 h) scales. According to model simulations, the maximum dust aerosol optical depths (AODs) range from  ∼  2.5 to  ∼  5.5 among the identified cases. At midday, dust outbreaks locally induce a NET (shortwave plus longwave) strong atmospheric warming (DREATM values up to 285 W m−2; Niger–Chad; dust AODs up to  ∼  5.5) and a strong surface cooling (DRENETSURF values down to −337 W m−2), whereas they strongly reduce the downward radiation at the ground level (DRESURF values down to −589 W m−2 over the Eastern Mediterranean, for extremely high dust AODs, 4.5–5). During night-time, reverse effects of smaller magnitude are found. At the top of the atmosphere (TOA), positive (planetary warming) DREs up to 85 W m−2 are found over highly reflective surfaces (Niger–Chad; dust AODs up to  ∼  5.5) while negative (planetary cooling) DREs down to −184 W m−2 (Eastern Mediterranean; dust AODs 4.5–5) are computed over dark surfaces at noon. Dust outbreaks significantly affect the mean regional radiation budget, with NET DREs ranging from −8.5 to 0.5 W m−2, from −31.6 to 2.1 W m−2, from −22.2 to 2.2 W m−2 and from −1.7 to 20.4 W m−2 for TOA, SURF, NETSURF and ATM, respectively. Although the shortwave DREs are larger than the longwave ones, the latter are comparable or even larger at TOA, particularly over the Sahara at midday. As a response to the strong surface day-time cooling, dust outbreaks cause a reduction in the regional sensible and latent heat fluxes by up to 45 and 4 W m−2, respectively, averaged over land areas of the simulation domain. Dust outbreaks reduce the temperature at 2 m by up to 4 K during day-time, whereas a reverse tendency of similar magnitude is found during night-time. Depending on the vertical distribution of dust loads and time, mineral particles heat (cool) the atmosphere by up to 0.9 K (0.8 K) during day-time (night-time) within atmospheric dust layers. Beneath and above the dust clouds, mineral particles cool (warm) the atmosphere by up to 1.3 K (1.2 K) at noon (night-time). On a regional mean basis, negative feedbacks on the total emitted dust (reduced by 19.5 %) and dust AOD (reduced by 6.9 %) are found when dust interacts with the radiation. Through the consideration of dust radiative effects in numerical simulations, the model positive and negative biases for the downward surface SW or LW radiation, respectively, with respect to Baseline Surface Radiation Network (BSRN) measurements, are reduced. In addition, they also reduce the model near-surface (at 2 m) nocturnal cold biases by up to 0.5 K (regional averages), as well as the model warm biases at 950 and 700 hPa, where the dust concentration is maximized, by up to 0.4 K. However, improvements are relatively small and do not happen in all episodes because other model first-order errors may dominate over the expected improvements, and the misrepresentation of the dust plumes' spatiotemporal features and optical properties may even produce a double penalty effect. The enhancement of dust forecasts via data assimilation techniques may significantly improve the results.The MDRAF project has received funding from the European Union’s Seventh Framework Programme for research, technological development and demonstration under grant agreement no. 622662. Oriol Jorba and Sara Basart acknowledge the grant CGL2013-46736 and the AXA Research Fund. Carlos Pérez García-Pando acknowledges long-term support from the AXA Research Fund, as well as the support received through the Ramón y Cajal programme (grant RYC-2015-18690) and grant CGL2017-88911-R of the Spanish Ministry of Economy and Competitiveness. The authors acknowledge support from the EU COST Action CA16202 “International Network to Encourage the Use of Monitoring and Forecasting Dust Products (InDust)”. Simulations were performed with the Marenostrum Supercomputer at the Barcelona Supercomputing Center (BSC). We would like to thank the principal investigators maintaining the BSRN sites used in the present work. The authors would like thank the Arnon Karnieli for his effort in establishing and maintaining SEDE_BOKER AERONET site.Peer ReviewedPostprint (published version

Microbiome and Diseases: Colorectal Cancer

Cancers of the large intestine are among the most frequent malignomas worldwide and also rank among the most frequent causes for cancer-related mortality in developed countries, with an even increasing incidence in an aging population. Patient survival and treatment options in the metastatic form of this disease are still relatively poor. The cell-autonomous genetic and epigenetic changes associated with carcinogenesis, and the stepwise and consecutive progression along the adenoma-carcinoma sequence in the colorectum, have been studied intensively over the last decades. However, there is a growing interest in the impact of gut microbial communities on the initiation and progression of this cancer entity. Overwhelming evidence meanwhile suggests that the microbiota is an important and potentially causative factor for colorectal cancer (CRC). A disturbance in the microbial community may lead to impairment of epithelial barrier function, imbalance in epithelial self-renewal, DNA damage, and altered immune responses, thereby fostering tumor initiation and progression