Phytoindication approach to assessing factors determining the habitat preferences of red deer (Cervus elaphus)

The study examined the possibility of using the phytoindication technique to describe habitat preferences of red deer in a relatively homogeneous area. Two alternative hypotheses were tested. Hypothesis 1 suggests that the relationship between red deer and vegetation is due to a trophic factor, so preferences for individual plant species cause vegetation to influence the distribution of animal numbers. Hypothesis 2 suggests that environmental factors influence vegetation, structuring and determining the productive level of the community as a whole. Therefore, environmental factors, rather than individual plant species, cause vegetation-animal interactions. The research was conducted on Biryuchiy Island Spit, where the Azov-Sivash National Nature Park is located. The geobotanical surveys were performed in three types of ecosystems: sandy steppe (vegetation class Festucetea vaginatae), saline meadows (vegetation class Festuco–Puccinellietea), and artificial forest plantation (vegetation class Robinietea). 250 releves were recorded according to the Brown-Blanquet approach. The number of fecal pellets and the number of groups of pellets of red deer was recorded together with geobotanical surveys in the same sample plots. The pellet groups counted in the field were converted to deer densities in specific vegetation classes taking into account the number of pellet groups on the site and the decay rate of the fecal pellets. The vegetation types were distinguished by the number of deer fecal pellets per unit area. The highest number of fecal pellets was found for the plant class Festucetea vaginatae, somewhat fewer fecal pellets were in the plant class Robinietea, and the lowest number was in the plant class Festuco-Puccinellietea. A geometric distribution model is adequate for explaining the experimental data on the number of fecal pellets. A total of 59 species of flowering plants were found. Based on the species composition and projective cover of species, the ecological regimes of ecotopes were identified by phytoindication. The correspondence analysis of the vegetation revealed two ordination axes. The ordination axis 1 (CA1) was able to explain 11.3% of community inertia, and the ordination axis 2 (CA2) was able to explain 5.2% of community inertia. The maximum excretory activity of animals was recorded for the central part of the ordination space, indicating the presence of an optimum zone in the gradient of environmental factors that structure plant communities. The forward selection procedure allowed the Nutrients Availability variable to be selected as the most important variable to explain variation in the plant community structure. The number of deer fecal pellets exhibited different patterns of response in the Nutrients Availability gradient. The response within the plant class Festucetea vaginatae could best be explained by Model III from the list of HOF-models. The response of the excretory activity of deer within the class Festuco-Puccinellietea could best be fitted by the model IV, which represents a symmetric Gaussian curve. The response of excretory activity in the Robinietea vegetation class was asymmetrical bimodal. The ecological properties of the red deer ecological niche in both the drier and less mineralized part of the range of ecological conditions and the wetter and more mineralized part should be assessed in the context of the prospects for future studies

Thermodynamic aspects of materials' hardness: prediction of novel superhard high-pressure phases

In the present work we have proposed the method that allows one to easily estimate hardness and bulk modulus of known or hypothetical solid phases from the data on Gibbs energy of atomization of the elements and corresponding covalent radii. It has been shown that hardness and bulk moduli of compounds strongly correlate with their thermodynamic and structural properties. The proposed method may be used for a large number of compounds with various types of chemical bonding and structures; moreover, the temperature dependence of hardness may be calculated, that has been performed for diamond and cubic boron nitride. The correctness of this approach has been shown for the recently synthesized superhard diamond-like BC5. It has been predicted that the hypothetical forms of B2O3, diamond-like boron, BCx and COx, which could be synthesized at high pressures and temperatures, should have extreme hardness

Evaluation of extraction-free RT-qPCR methods for SARS-CoV-2 diagnostics

Extraction-based real-time reverse transcription quantitative polymerase chain reaction (RT-qPCR) is currently the “gold standard” in SARS-CoV-2 diagnostics. However, some extraction-free RT-qPCR techniques have recently been developed. In this study, we compared the sensitivity of traditional extraction-based, heated extraction-free, and unheated extraction-free RT-qPCR methods for SARS-CoV-2 detection in nasopharyngeal swabs from symptomatic individuals. The unheated extraction-free method showed perfect agreement with the standard extraction-based RT-qPCR. By contrast, the heat-treated technique was associated with an 8.2% false negativity rate. Unheated extraction-free RT-qPCR for the molecular diagnosis of SARS-CoV-2 is a valuable alternative to the traditional extraction-based methods and may accelerate turnaround times by about two hours

Outbreak of sars-cov-2 lineage 20i/501y.V1 in a nursing home underlines the crucial role of vaccination in both residents and staff

Elderly residents in nursing homes are at very high risk of life-threatening COVID-19-related outcomes. In this report, an epidemiological and serological investigation of a SARS-CoV-2 outbreak in an Italian nursing home is described. Among the residents, all but one (19/20) were regularly vaccinated against SARS-CoV-2. In mid-February 2021, a non-vaccinated staff member of the nursing home was diagnosed with the SARS-CoV-2 infection. Following the outbreak investigation, a total of 70% (14/20) of residents aged 77–100 years were found positive. The phylogenetic analysis showed that the outbreak was caused by the SARS-CoV-2 variant of concern 202012/01 (the so-called “UK variant”). However, all but one positive subjects (13/14) were fully asymptomatic. The only symptomatic patient was a vaccinated 86-year-old female with a highly compromised health background and deceased approximately two weeks later. The subsequent serological investigation showed that the deceased patient was the only vaccinated subject that did not develop the anti-spike protein antibody response, therefore being likely a vaccine non-responder. Although the available mRNA SARS-CoV-2 vaccine was not able to prevent several asymptomatic infections, it was able to avert most symptomatic disease cases caused by the SARS-CoV-2 variant of concern 202012/01 in nursing home residents

Comparative diagnostic performance of rapid antigen detection tests for COVID-19 in a hospital setting

Background: The availability of accurate and rapid diagnostic tools for COVID-19 is essential for tackling the ongoing pandemic. Our study aimed to quantify the performance of available antigen-detecting rapid diagnostic tests (Ag-RDTs) in a real-world hospital setting. Methods: In this retrospective analysis, the diagnostic performance of 7 Ag-RDTs was compared with real-time reverse transcription quantitative polymerase chain reaction assay in terms of sensitivity, specificity and expected predictive values. Results: A total of 321 matched Ag-RDTreal-time reverse transcription quantitative polymerase chain reaction samples were analyzed retrospectively. The overall sensitivity and specificity of the Ag-RDTs was 78.7% and 100%, respectively. However, a wide range of sensitivity estimates by brand (66.0%–93.8%) and cycle threshold (Ct) cut-off values (Ct <25: 96.2%; Ct 30–35: 31.1%) was observed. The optimal Ct cut-off value that maximized sensitivity was 29. Conclusions: The routine use of Ag-RDTs may be convenient in moderate-to-high intensity settings when high volumes of specimens are tested every day. However, the diagnostic performance of the commercially available tests may differ substantially

Влияние ионной бомбардировки на процессы азотирования при комплексной модификации поверхности стали

Ионная бомбардировка поверхностей, модифицируемых с использованием вакуумно-дуговых технологий, является основным физическим процессом для таких модификаций. Эксперименты производились на установке типа «Булат». В работе по азотированию поверхностей массивных стальных деталей (ст. 25Х1МФ и 40Х) исследованы особенности использования в качестве бомбардирующих частиц ионов титана и молибдена, обладающих различным энергосодержанием. Этот этап ионной бомбардировки связан с очисткой поверхности и нагревом её до необходимой температуры. На этапе азотирования бомбардировку осуществляли ионами азота, генерированными в двухступенчатом разряде. Для диагностики изменений, происходящих на поверхности образцов и на расстоянии от неё вглубь металла, использовали рентгено-флуоресцентный масс-анализ и производили измерения твёрдости с помощью прибора Nanoindentor G200. Выполнены сравнительные измерения относительных концентраций элементов в составе поверхности стали после бомбардировок различными ионами (Ti или Мо), а также получены профили залегания внедрённого в металл азота и модифицированной твёрдости. Выявлены особенности в результатах азотирования стальной поверхности при использовании разных сортов ионов. Фотографии поперечных шлифов, полученных с помощью оптического металлографического микроскопа ММО 1600, продемонстрировали отличия в структурных характеристиках приповерхностных слоёв при бомбардировках ионами титана и молибдена. Эти отличия связаны с повышенной температурой в слоях при бомбардировке ионами молибдена. Целью настоящей работы является проведение сравнительных экспериментов по обработке стальных поверхностей ускоренными ионами разных металлов с последующим анализом влияния таких воздействий на процессы азотирования этих поверхностей

Effect of the 2020/21 season influenza vaccine on SARS-CoV-2 infection in a cohort of Italian healthcare workers

Objectives: Healthcare workers (HCWs) are a priority group for seasonal influenza vaccination (SIV). The 2020/21 SIV campaign was conducted during the second wave of the COVID-19 pandemic. Vaccines, including SIV, may exert non-specific protective effects on other infectious diseases which may be ascribable to the concept of trained immunity. The aim of this study was to explore the association between 2020/21 SIV and SARS-CoV-2 positivity in a cohort of Italian HCWs. Methods: In this observational study, a cohort of HCWs employed by a large (ca 5000 employees) referral tertiary acute-care university hospital was followed up retrospectively until the start of the COVID-19 vaccination campaign. The independent variable of interest was the 2020/21 SIV uptake. Both egg-based and cell culture-derived quadrivalent SIVs were available. The study outcome was the incidence of new SARS-CoV-2 infections, as determined by RT-PCR. Multivariable Cox regression was applied in order to discern the association of interest. Results: The final cohort consisted of 2561 HCWs who underwent ≥1 RT-PCR test and accounted for a total of 94,445 person-days of observation. SIV uptake was 35.6%. During the study period, a total of 290 new SARS-CoV-2 infections occurred. The incidence of new SARS-CoV-2 was 1.62 (95% CI: 1.22–2.10) and 3.91 (95% CI: 3.43–4.45) per 1000 person-days in vaccinated and non-vaccinated HCWs, respectively, with an adjusted non-proportional hazard ratio of 0.37 (95% CI: 0.22–0.62). E-values suggested that unmeasured confounding was unlikely to explain the association. Conclusions: A lower risk of SARS-CoV-2 infection was observed among SIV recipients

Prevalence of Pneumococcal Serotypes in Community-Acquired Pneumonia among Older Adults in Italy: A Multicenter Cohort Study.

Pneumococcal community-acquired pneumonia (CAP) is a leading cause of mortality. Following the introduction of pneumococcal conjugate vaccines (PCVs) in children, a decrease in the burden of the disease was reported. In parallel, an increase in non-vaccine serotypes was also noted. The objective of this study was to assess the current serotype-specific epidemiology of pneumococci among Italian older adults hospitalized for CAP. A prospective study was conducted between 2017 and 2020 in four Italian regions. Subjects aged ≥65 years hospitalized with confirmed CAP were tested for pneumococci using both pneumococcal urinary antigen and serotype-specific urine antigen tests able to identify all 24 serotypes included in the available vaccines. Of the 1155 CAP cases, 13.1% were positive for pneumococci. The most prevalent serotypes were 3 (2.0%), 8 (1.7%), 22F (0.8 %) and 11A (0.7%). These serotypes are all included in the newly licensed PCV20. The serotypes included in PCV13, PCV15 and PCV20 contributed to 3.3%, 4.4% and 7.5% of the CAP cases, respectively. In the context of a low PCV13 coverage among older adults and a high PCV coverage in children, a substantial proportion of CAP is caused by PCV13 serotypes. Higher valency PCV15 and PCV20 may provide additional benefits for the prevention of CAP in vaccinated older adults

Modeling and simulation of strain-induced phase transformations under compression and torsion in a rotational diamond anvil cell

Strain-induced phase transformations (PTs) under compression and torsion in rotational diamond anvils are simulated using a finite-element approach. Results are obtained for three ratios of yield strengths of low-pressure and high-pressure phases and are compared with those for the compression without torsion from Levitas and Zarechnyy Phys. Rev. B 82 174123 (2010). Various experimental effects are reproduced, including a pressure self-multiplication effect, plateau at pressure distribution at the diffuse interface, simultaneous occurrence of direct and reverse PTs, and irregular stress distribution for PT to a weaker phase. The obtained results change the fundamental understanding of strain-induced PT in terms of interpretation of experimental measurements and the extracting of information on material processes from sample behavior. Intense radial plastic flow moves the high-pressure phase to the low-pressure region, which may lead to misinterpretation of measurements. Various interpretations based on a simplified equilibrium equation (for example, about zero yield strength of phase mixture and hydrostatic conditions during PT) appears to be wrong because of inapplicability of this equation for cases with large gradients of phase concentration and yield strength. The approach developed represents a tool for designing experiments for different purposes and for controlling PTs, and it opens unexpected ways to extract material information by combining simulation and experiment.This article is from Physical Review B 82 (2010): 174124, doi:10.1103/PhysRevB.82.174124. Posted with permission.</p

Hot nanoindentation in inert environments

An instrument capable of performing nanoindentation at temperatures up to 500 °C in inert atmospheres, including partial vacuum and gas near atmospheric pressures, is described. Technical issues associated with the technique (such as drift and noise) and the instrument (such as tip erosion and radiative heating of the transducer) are identified and addressed. Based on these considerations, preferred operation conditions are identified for testing on various materials. As a proof-of-concept demonstration, the hardness and elastic modulus of three materials are measured: fused silica (nonoxidizing), aluminum, and copper (both oxidizing). In all cases, the properties match reasonably well with published data acquired by more conventional test methods.United States. Office of Naval Research (Contract No. N00014-08-1-0312)Massachusetts Institute of Technology. Institute for Soldier Nanotechnologie