Genera of phytopathogenic fungi : GOPHY 4

This paper is the fourth contribution in the Genera of Phytopathogenic Fungi (GOPHY) series. The series provides morphological descriptions and information about the pathology, distribution, hosts and disease symptoms, as well as DNA barcodes for the taxa covered. Moreover, 12 whole-genome sequences for the type or new species in the treated genera are provided. The fourth paper in the GOPHY series covers 19 genera of phytopathogenic fungi and their relatives, including Ascochyta, Cadophora, Celoporthe, Cercospora, Coleophoma, Cytospora, Dendrostoma, Didymella, Endothia, Heterophaeomoniella, Leptosphaerulina, Melampsora, Nigrospora, Pezicula, Phaeomoniella, Pseudocercospora, Pteridopassalora, Zymoseptoria, and one genus of oomycetes, Phytophthora. This study includes two new genera, 30 new species, five new combinations, and 43 typifications of older names.https://www.journals.elsevier.com/studies-in-mycologydm2022BiochemistryForestry and Agricultural Biotechnology Institute (FABI)GeneticsMicrobiology and Plant Patholog

Use of beneficial bacteria and their secondary metabolites to control grapevine pathogen diseases

Grapevine is one of the most important economic crops yielding berries, wine products as well as derivates. However, due to the large array of pathogens inducing diseases on this plant, considerable amounts of pesticides—with possible negative impact on the environment and health—have been used and are currently used in viticulture. To avoid negative impacts of such products and to ensure product quality, a substantial fraction of pesticides needs to be replaced in the near future. One solution can be related to the use of beneficial bacteria inhabiting the rhizo- and/or the endosphere of plants. These biocontrol bacteria and their secondary metabolites can reduce directly or indirectly pathogen diseases by affecting pathogen performance by antibiosis, competition for niches and nutrients, interference with pathogen signaling or by stimulation of host plant defenses. Due to the large demand for biocontrol of grapevine diseases, such biopesticides, their modes of actions and putative consequences of their uses need to be described. Moreover, the current knowledge on new strains from the rhizo- and endosphere and their metabolites that can be used on grapevine plants to counteract pathogen attack needs to be discussed. This is in particular with regard to the control of root rot, grey mould, trunk diseases, powdery and downy mildews, pierce’s disease, grapevine yellows as well as crown gall. Future prospects on specific beneficial microbes and their secondary metabolites that can be used as elicitors of plant defenses and/or as biocontrol agents with potential use in a more sustainable viticulture will be further discussed

Identification and distribution of Botryosphaeria spp. associated with grapevine cankers in California

Botryosphaeria spp. recently have been identified as important grapevine pathogens worldwide. To date, Botryosphaeria rhodina has been the only species associated with cankers on Vitis vinifera in California. A field survey of 166 vineyards in 21 counties was conducted in order to determine the occurrence of other Botryosphaeria spp. in California. In all, 1,735 samples of cankered trunks, cordons, and spurs were collected. Botryosphaeria spp. were the most common fungi isolated from grapevine cankers in California. Morphological identification along with phylogenetic analysis of the internal transcribed spacer region (ITS1-5.8S-ITS2) of the nuclear ribosomal DNA (rDNA) and a partial sequence of the beta-tubulin gene showed that at least seven Botryosphaeria spp. occur on grapevines in California: B. australis, B. dothidea, B. lutea, B. obtusa, B. parva, B. rhodina, and B. stevensii. Botryosphaeria spp. were found in grapevine cankers in all grape-growing regions surveyed in California, whereas incidence and distribution varied with location. Grapevine cankers in California have been associated mainly with Eutypa dieback. However, the frequent recovery of Botryosphaeria spp. from cankers in this study indicates that the role of these fungi in grapevine health needs to be more carefully considered

Review of tufa deposition and palaeohydrological conditions in the White Peak, Derbyshire UK : implications for Quaternary landscape evolution

This review considers the geological and geomorphological context of tufa barrages that occupy buried valley settings in the Wye catchment, Derbyshire. It describes the potential relationship of the tufa with locations of hypothesised river captures and inception horizon-guided groundwater flow paths. Tufa barrage development is associated with steps in the bedrock, which may be related to knick-point recession during river capture. Broad estimates of valley incision have been calculated from previously dated deposits. These support current interpretations of particularly significant effective base-level lowering during the Anglian and Devensian stages of the Quaternary and have the potential to add to the knowledge of regional uplift histories