867 research outputs found

    Global Citizen Science perspectives on Open Science

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    Salvage high-dose chemotherapy for children with extragonadal germ-cell tumours

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    We reviewed the European Group for Blood and Marrow Transplantation (EBMT) experience with salvage high-dose chemotherapy (HDC) in paediatric patients with extragonadal germ-cell tumour (GCT). A total of 23 children with extragonadal GCT, median age 12 years (range 1–20), were treated with salvage HDC with haematopoietic progenitor cell support. The GCT primary location was intracranial site in nine cases, sacrococcyx in eight, retroperitoneum in four, and mediastinum in two. In all, 22 patients had a nongerminomatous GCT and one germinoma. Nine patients received HDC in first- and 14 in second- or third-relapse situation. No toxic deaths occurred. Overall, 16 of 23 patients (70%) achieved a complete remission. With a median follow-up of 66 months (range 31–173 months), 10 (43%) are continuously disease-free. Of six patients who had a disease recurrence after HDC, one achieved a disease-free status with surgical resection followed by chemotherapy and radiotherapy. In total, 11 patients (48%) are currently disease-free. Eight of 14 patients (57%) with extracranial primary and three of nine patients (33%) with intracranial primary GCT are currently disease-free. HDC induced impressive long-term remissions as salvage treatment in children with extragonadal extracranial GCTs. Salvage HDC should be investigated in prospective trials in these patients

    Evelopment of the model of diagnosis of the risk of bankruptcy

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    The article presents an overview of foreign and domestic models for the diagnosis of bankruptcy risk, and gives a brief description of them. Also considered the development of our own model of bankruptcy risk diagnostics for Russian enterprise

    Pairwise covariance adds little to secondary structure prediction but improves the prediction of non-canonical local structure

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    <p>Abstract</p> <p>Background</p> <p>Amino acid sequence probability distributions, or profiles, have been used successfully to predict secondary structure and local structure in proteins. Profile models assume the statistical independence of each position in the sequence, but the energetics of protein folding is better captured in a scoring function that is based on pairwise interactions, like a force field.</p> <p>Results</p> <p>I-sites motifs are short sequence/structure motifs that populate the protein structure database due to energy-driven convergent evolution. Here we show that a pairwise covariant sequence model does not predict alpha helix or beta strand significantly better overall than a profile-based model, but it does improve the prediction of certain loop motifs. The finding is best explained by considering secondary structure profiles as multivariant, all-or-none models, which subsume covariant models. Pairwise covariance is nonetheless present and energetically rational. Examples of negative design are present, where the covariances disfavor non-native structures.</p> <p>Conclusion</p> <p>Measured pairwise covariances are shown to be statistically robust in cross-validation tests, as long as the amino acid alphabet is reduced to nine classes. An updated I-sites local structure motif library that provides sequence covariance information for all types of local structure in globular proteins and a web server for local structure prediction are available at <url>http://www.bioinfo.rpi.edu/bystrc/hmmstr/server.php</url>.</p

    Разработка основного оборудования получения металлического лития

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    Объектом исследования является выпарной аппарат установки получения металлического лития, находящейся в ОАО "НЗХК" (Новосибирский завод химконцентратов). Целью работы были проектирование и исследование выпарного аппарата с центральной циркуляционной трубой и подвесной греющей камерой. Преимущества аппарата с подвесной греющей камерой. Для достижения поставленной цели были решены следующие задачи: анализ конструкций аппаратов; произведен конструктивный и механический расчеты; сравнение полученных расчетов.The object of study is evaporating apparatus unit for production of lithium metal located in the Novosibirsk chemical concentrates plant (Novosibirsk chemical concentrates plant). The aim of this work was the design and study of evaporator with the Central circulation pipe and the suspended heating chamber. The advantages of the apparatus with overhead heating chamber. To achieve this goal have been resolved following tasks: analysis of equipment designs; produced structural and mechanical calculations; comparison of the calculations

    Бухгалтерский учет расчетов с персоналом по оплате труда (на примере предприятия HORUS INTERTRADE & CONSULTING)

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    В данной работе была рассмотрена специфика бухгалтерского учета расчетов с персоналом по оплате труда как в соответствии с российским законодательством, так и с законодательством Республики Узбекистан, дана характеристика организации бухгалтерского учета операций по расчетам с персоналом в узбекской компании ООО "Horus Intertrade & Consulting Kft", предложены меры по ее совершенствованию.In this work, the specifics of the bookkeeping of settlements with employees on remuneration of labor, both in accordance with Russian legislation and with the legislation of the Republic of Uzbekistan, was given, and the characteristics of the organization of accounting for transactions with personnel in the Uzbek company Horus Intertrade & Consulting Kft, Measures for its improvement have been proposed

    Predicting residue contacts using pragmatic correlated mutations method: reducing the false positives

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    BACKGROUND: Predicting residues' contacts using primary amino acid sequence alone is an important task that can guide 3D structure modeling and can verify the quality of the predicted 3D structures. The correlated mutations (CM) method serves as the most promising approach and it has been used to predict amino acids pairs that are distant in the primary sequence but form contacts in the native 3D structure of homologous proteins. RESULTS: Here we report a new implementation of the CM method with an added set of selection rules (filters). The parameters of the algorithm were optimized against fifteen high resolution crystal structures with optimization criterion that maximized the confidentiality of the predictions. The optimization resulted in a true positive ratio (TPR) of 0.08 for the CM without filters and a TPR of 0.14 for the CM with filters. The protocol was further benchmarked against 65 high resolution structures that were not included in the optimization test. The benchmarking resulted in a TPR of 0.07 for the CM without filters and to a TPR of 0.09 for the CM with filters. CONCLUSION: Thus, the inclusion of selection rules resulted to an overall improvement of 30%. In addition, the pair-wise comparison of TPR for each protein without and with filters resulted in an average improvement of 1.7. The methodology was implemented into a web server that is freely available to the public. The purpose of this implementation is to provide the 3D structure predictors with a tool that can help with ranking alternative models by satisfying the largest number of predicted contacts, as well as it can provide a confidence score for contacts in cases where structure is known

    Разработка технологии сборки-сварки системы отопления административно-бытового корпуса

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    Актуальность работы: в данной выпускной квалификационной работе производится разработка и сравнение технологий: сварка стальных труб, сварка полипропиленовых труб и пайка медных труб при монтаже системы отопления административно-бытового корпуса. Объектом исследования является процесс изготовления системы отопления административно-бытового корпуса. Цели и задачи исследования: в результате данной работы следует выбрать технологию монтажа с наибольшей степенью надежности получаемого изделия и оптимальной себестоимостью производства.The relevance of the work: in this prom qualification development work and comparison technology: steel pipe welding, welding of polypropylene pipes and solder copper pipe when installing the heating system of the administrative Corps. The object of research is the process of manufacturing heating systems the administrative Corps. The goals and objectives of the study: As a result of this work, you must select the mounting technology with the highest degree of reliability of the resulting products and optimal cost price of production

    P110 and P140 Cytadherence-Related Proteins Are Negative Effectors of Terminal Organelle Duplication in Mycoplasma genitalium

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    BACKGROUND:The terminal organelle is a complex structure involved in many aspects of the biology of mycoplasmas such as cell adherence, motility or cell division. Mycoplasma genitalium cells display a single terminal organelle and duplicate this structure prior to cytokinesis in a coordinated manner with the cell division process. Despite the significance of the terminal organelle in mycoplasma virulence, little is known about the mechanisms governing its duplication. METHODOLOGY/PRINCIPAL FINDINGS:In this study we describe the isolation of a mutant, named T192, with a transposon insertion close to the 3' end of the mg192 gene encoding for P110 adhesin. This mutant shows a truncated P110, low levels of P140 and P110 adhesins, a large number of non-motile cells and a high frequency of new terminal organelle formation. Further analyses revealed that the high rates of new terminal organelle formation in T192 cells are a direct consequence of the reduced levels of P110 and P140 rather than to the expression of a truncated P110. Consistently, the phenotype of the T192 mutant was successfully complemented by the reintroduction of the mg192 WT allele which restored the levels of P110 and P140 to those of the WT strain. Quantification of DAPI-stained DNA also showed that the increase in the number of terminal organelles in T192 cells is not accompanied by a higher DNA content, indicating that terminal organelle duplication does not trigger DNA replication in mycoplasmas. CONCLUSIONS/SIGNIFICANCE:Our results demonstrate the existence of a mechanism regulating terminal organelle duplication in M. genitalium and strongly suggest the implication of P110 and P140 adhesins in this mechanism

    Meta-Analysis of Mass Balances Examining Chemical Fate during Wastewater Treatment

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    Mass balances are an instructive means for investigating the fate of chemicals during wastewater treatment. In addition to the aqueous-phase removal efficiency (Φ), they can inform on chemical partitioning, transformation, and persistence, as well as on the chemical loading to streams and soils receiving, respectively, treated effluent and digested sewage sludge (biosolids). Release rates computed on a per-capita basis can serve to extrapolate findings to a larger scale. This review examines over a dozen mass balances conducted for various organic wastewater contaminants, including prescription drugs, estrogens, fragrances, antimicrobials, and surfactants of differing sorption potential (hydrophobicity), here expressed as the 1-octanol−water partition coefficient (KOW) and the organic carbon normalized sorption coefficient (KOC). Major challenges to mass balances are the collection of representative samples and accurate quantification of chemicals in sludge. A meta-analysis of peer-reviewed data identified sorption potential as the principal determinant governing chemical persistence in biosolids. Occurrence data for organic wastewater compounds detected in digested sludge followed a simple nonlinear model that required only KOW or KOC as the input and yielded a correlation coefficient of 0.9 in both instances. The model predicted persistence in biosolids for the majority (>50%) of the input load of organic wastewater compounds featuring a log10KOW value of greater than 5.2 (log10KOC > 4.4). In contrast, hydrophobicity had no or only limited value for estimating, respectively, Φ and the overall persistence of a chemical during conventional wastewater treatment
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