59 research outputs found
Angioscopic Evaluation of Stabilizing Effects of Bezafibrate on Coronary Plaques in Patients With Coronary Artery Disease
Background Since long-term administrations of anti-hyperlipidemic
agents result in reduction in % stenosis or increase in
minimum lumen diameter (MLD) of stenotic coronary
segments, it is generally believed that anti-hyperlipidemic agents
stabilize vulnerable coronary plaques. However, recent pathologic
and angioscopic studies revealed that vulnerability of coronary
plaques is not related to severity of stenosis and the rims rather
than top of the plaques disrupt, and therefore, angiography is not
adequate for evaluation of vulnerability
Exploring Case-Control Genetic Association Tests Using Phase Diagrams
Background: By a new concept called "phase diagram", we compare two commonly
used genotype-based tests for case-control genetic analysis, one is a
Cochran-Armitage trend test (CAT test at , or CAT0.5) and another
(called MAX2) is the maximization of two chi-square test results: one from the
two-by-two genotype count table that combines the baseline homozygotes and
heterozygotes, and another from the table that combines heterozygotes with risk
homozygotes. CAT0.5 is more suitable for multiplicative disease models and MAX2
is better for dominant/recessive models.
Methods: We define the CAT0.5-MAX2 phase diagram on the disease model space
such that regions where MAX2 is more powerful than CAT0.5 are separated from
regions where the CAT0.5 is more powerful, and the task is to choose the
appropriate parameterization to make the separation possible.
Results: We find that using the difference of allele frequencies ()
and the difference of Hardy-Weinberg disequilibrium coefficients
() can separate the two phases well, and the phase boundaries
are determined by the angle , which is an
improvement over the disease model selection using only.
Conclusions: We argue that phase diagrams similar to the one for CAT0.5-MAX2
have graphical appeals in understanding power performance of various tests,
clarifying simulation schemes, summarizing case-control datasets, and guessing
the possible mode of inheritance
Myelin Basic Protein as a Novel Genetic Risk Factor in Rheumatoid Arthritis—A Genome-Wide Study Combined with Immunological Analyses
Rheumatoid arthritis (RA) is a major cause of adult chronic inflammatory arthritis and a typical complex trait. Although several genetic determinants have been identified, they account for only a part of the genetic susceptibility. We conducted a genome-wide association study of RA in Japanese using 225,079 SNPs genotyped in 990 cases and 1,236 controls from two independent collections (658 cases and 934 controls in collection1; 332 cases and 302 controls in collection2), followed by replication studies in two additional collections (874 cases and 855 controls in collection3; 1,264 cases and 948 controls in collection4). SNPs showing p<0.005 in the first two collections and p<10−4 by meta-analysis were further genotyped in the latter two collections. A novel risk variant, rs2000811, in intron2 of the myelin basic protein (MBP) at chromosome 18q23 showed strong association with RA (p = 2.7×10−8, OR 1.23, 95% CI: 1.14–1.32). The transcription of MBP was significantly elevated with the risk allele compared to the alternative allele (p<0.001). We also established by immunohistochemistry that MBP was expressed in the synovial lining layer of RA patients, the main target of inflammation in the disease. Circulating autoantibody against MBP derived from human brain was quantified by ELISA between patients with RA, other connective tissue diseases and healthy controls. As a result, the titer of anti-MBP antibody was markedly higher in plasma of RA patients compared to healthy controls (p<0.001) and patients with other connective tissue disorders (p<0.001). ELISA experiment using citrullinated recombinant MBP revealed that a large fraction of anti-MBP antibody in RA patients recognized citrullinated MBP. This is the first report of a genetic study in RA implicating MBP as a potential autoantigen and its involvement in pathogenesis of the disease
A Genetic Basis of Susceptibility to Acute Pyelonephritis
For unknown reasons, urinary tract infections (UTIs) are clustered in certain individuals. Here we propose a novel, genetically determined cause of susceptibility to acute pyelonephritis, which is the most severe form of UTI. The IL-8 receptor, CXCR1, was identified as a candidate gene when mIL-8Rh mutant mice developed acute pyelonephritis (APN) with severe tissue damage.We have obtained CXCR1 sequences from two, highly selected APN prone patient groups, and detected three unique mutations and two known polymorphisms with a genotype frequency of 23% and 25% compared to 7% in controls (p<0.001 and p<0.0001, respectively). When reflux was excluded, 54% of the patients had CXCR1 sequence variants. The UTI prone children expressed less CXCR1 protein than the pediatric controls (p<0.0001) and two sequence variants were shown to impair transcription.The results identify a genetic innate immune deficiency, with a strong link to APN and renal scarring
Changes in stroke volume induced by lung recruitment maneuver can predict fluid responsiveness during intraoperative lung-protective ventilation in prone position
BMC Anesthesiology. 2021, 21 (1), P.30
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