Stage-dependent transient storage of phosphorus in alluvial floodplains

Models for contaminant transport in streams commonly idealize transient storage as a well-mixed but immobile system. These transient storage models capture rapid (near-stream) hyporheic storage and transport, but do not account for large-scale, stage-dependent interaction with the alluvial aquifer. The objective of this research was to document transient storage of phosphorus (P) in coarse gravel alluvium potentially influenced by large-scale, stage-dependent preferential flow pathways (PFPs). Long-term monitoring was performed at floodplain sites adjacent to the Barren Fork Creek and Honey Creek in northeastern Oklahoma. Based on results from subsurface electrical resistivity mapping which was correlated to hydraulic conductivity data, observation wells were installed both in higher hydraulic conductivity and lower hydraulic conductivity subsoils. Water levels in the wells were monitored over time, and water samples were obtained from the observation wells and the stream to document P concentrations at multiple times during high flow events. Contour plots indicating direction of flow were developed using water table elevation data. Contour plots of total P concentrations showed the alluvial aquifer acting as a transient storage zone, with P-laden stream water heterogeneously entering the aquifer during the passage of a storm pulse, and subsequently re-entering the stream during baseflow conditions. Some groundwater in the alluvial floodplains had total P concentrations that mirrored the streams’ total P concentrations. A detailed analysis of P forms indicated that particulate P (i.e. P attached to particulates greater than 0·45 μm) was a significant portion of the P transport. This research suggests the need for more controlled studies on stage-dependent transient storage in alluvial systems

Stage-dependent transient storage of phosphorus in alluvial floodplains

Models for contaminant transport in streams commonly idealize transient storage as a well-mixed but immobile system. These transient storage models capture rapid (near-stream) hyporheic storage and transport, but do not account for large-scale, stage-dependent interaction with the alluvial aquifer. The objective of this research was to document transient storage of phosphorus (P) in coarse gravel alluvium potentially influenced by large-scale, stage-dependent preferential flow pathways (PFPs). Long-term monitoring was performed at floodplain sites adjacent to the Barren Fork Creek and Honey Creek in northeastern Oklahoma. Based on results from subsurface electrical resistivity mapping which was correlated to hydraulic conductivity data, observation wells were installed both in higher hydraulic conductivity and lower hydraulic conductivity subsoils. Water levels in the wells were monitored over time, and water samples were obtained from the observation wells and the stream to document P concentrations at multiple times during high flow events. Contour plots indicating direction of flow were developed using water table elevation data. Contour plots of total P concentrations showed the alluvial aquifer acting as a transient storage zone, with P-laden stream water heterogeneously entering the aquifer during the passage of a storm pulse, and subsequently re-entering the stream during baseflow conditions. Some groundwater in the alluvial floodplains had total P concentrations that mirrored the streams’ total P concentrations. A detailed analysis of P forms indicated that particulate P (i.e. P attached to particulates greater than 0·45 μm) was a significant portion of the P transport. This research suggests the need for more controlled studies on stage-dependent transient storage in alluvial systems

PREFERENTIAL FLOW EFFECTS ON SUBSURFACE CONTAMINANT TRANSPORT IN ALLUVIAL FLOODPLAINS

For sorbing contaminants, transport from upland areas to surface water systems is typically considered to be due to surface runoff, with negligible input from subsurface transport assumed. However, certain conditions can lead to an environment where subsurface transport to streams may be significant. The Ozark region, including parts of Oklahoma, Arkansas, and Missouri, is one such environment, characterized by cherty, gravelly soils and gravel bed streams. Previous research identified a preferential flow path (PFP) at an Ozark floodplain along the Barren Fork Creek in northeastern Oklahoma and demonstrated that even a sorbing contaminant, i.e., phosphorus, can be transported in significant quantities through the subsurface. The objective of this research was to investigate the connectivity and floodplain-scale impact of subsurface physical heterogeneity (i.e., PFPs) on contaminant transport in alluvial floodplains in the Ozarks. This research also evaluated a hypothesis that alluvial groundwater acts as a transient storage zone, providing a contaminant sink during high stream flow and a contaminant source during stream baseflow. The floodplain and PFP were mapped with two electrical resistivity imaging techniques. Low-resistivity features (i.e., less than 200 Ω-m) corresponded to topographical depressions on the floodplain surface, which were hypothesized to be relict stream channels with fine sediment (i.e., sand, silt, and clay) and gravel deposits. The mapped PFP, approximately 2 m in depth and 5 to 10 m wide, was a buried gravel bar with electrical resistivity in the range of 1000 to 5000 Ω-m. To investigate the PFP, stream, and groundwater dynamics, a constant-head trench test was installed with a conservative tracer (Rhodamine WT) injected into the PFP at approximately 85 mg/L for 1.5 h. Observation wells were installed along the PFP and throughout the floodplain. Water table elevations were recorded real-time using water level loggers, and water samples were collected throughout the experiment. Results of the experiment demonstrated that stream/aquifer interaction was spatially non-uniform due to floodplain-scale heterogeneity. Transport mechanisms included preferential movement of Rhodamine WT along the PFP, infiltration of Rhodamine WT into the alluvial groundwater system, and then transport in the alluvial system as influenced by the floodplain-scale stream/aquifer dynamics. The electrical resistivity data assisted in predicting the movement of the tracer in the direction of the mapped preferential flow pathway. Spatially variable PFPs, even in the coarse gravel subsoils, affected water level gradients and the distribution of tracer into the shallow groundwater system

Factors Affecting Youth Voice in Decision-Making Processes within Youth Development Programs

Results of a study aimed at determining the factors affecting the level of inclusiveness of youth voice in the decision-making process of the 4-H youth development program are discussed in this paper. State and field level 4-H professionals identified potential factors which affect youth voice in the decision-making process. The information gathered was utilized to identify the degree to which youth voice was incorporated in the decision-making process, to better understand how to suit youth’s needs, identify promising practices, and diagnose barriers towards fostering youth voice within the 4-H youth development program. This feature article presents the findings of the study, and discusses potential ramifications and remedies

The hydraulic conductivity structure of gravel-dominated vadose zones within alluvial floodplains

The floodplains of many gravel-bed streams have a general stratigraphy that consists of a layer of topsoil covering gravel-dominated subsoil. Previous research has demonstrated that this stratigraphy can facilitate preferential groundwater flow through focused linear features, such as paleochannels, or gravelly regions within the vadose zone. These areas within the floodplain vadose zone may provide a route for interactions between the floodplain surface and alluvial groundwater, effectively extending the hyporheic zone across the floodplain during high stream stage. The objective of this research was to assess the structure and scale of texture heterogeneity within the vadose zone within the gravel subsoils of alluvial floodplains using resistivity data combined with hydraulic testing and sediment sampling of the vadose zone. Point-scale and broad-scale methodologies in combination can help us understand spatial heterogeneity in hydraulic conductivity without the need for a large number of invasive hydraulic tests. The evaluated sites in the Ozark region of the United States were selected due to previous investigations indicating that significant high conductivity flow zones existed in a matrix which include almost no clay content. Data indicated that resistivity corresponded with the fine content in the vadose zone and subsequently corresponds to the saturated hydraulic conductivity. Statistical analysis of resistivity data, and supported by data from the soil sampling and permeameter hydraulic testing, identified isolated high flow regions and zones that can be characterized as broad-scale high hydraulic conductivity features with potentially significant consequences for the migration of water and solutes and therefore are of biogeochemical and ecological significance

A multi-organ transcriptome resource for the Burmese Python (Python molurus bivittatus)

<p>Abstract</p> <p>Background</p> <p>Snakes provide a unique vertebrate system for studying a diversity of extreme adaptations, including those related to development, metabolism, physiology, and venom. Despite their importance as research models, genomic resources for snakes are few. Among snakes, the Burmese python is the premier model for studying extremes of metabolic fluctuation and physiological remodelling. In this species, the consumption of large infrequent meals can induce a 40-fold increase in metabolic rate and more than a doubling in size of some organs. To provide a foundation for research utilizing the python, our aim was to assemble and annotate a transcriptome reference from the heart and liver. To accomplish this aim, we used the 454-FLX sequencing platform to collect sequence data from multiple cDNA libraries.</p> <p>Results</p> <p>We collected nearly 1 million 454 sequence reads, and assembled these into 37,245 contigs with a combined length of 13,409,006 bp. To identify known genes, these contigs were compared to chicken and lizard gene sets, and to all Genbank sequences. A total of 13,286 of these contigs were annotated based on similarity to known genes or Genbank sequences. We used gene ontology (GO) assignments to characterize the types of genes in this transcriptome resource. The raw data, transcript contig assembly, and transcript annotations are made available online for use by the broader research community.</p> <p>Conclusion</p> <p>These data should facilitate future studies using pythons and snakes in general, helping to further contribute to the utilization of snakes as a model evolutionary and physiological system. This sequence collection represents a major genomic resource for the Burmese python, and the large number of transcript sequences characterized should contribute to future research in this and other snake species.</p

Influence of ceramide on lipid domain stability studied with small-angle neutron scattering: The role of acyl chain length and unsaturation

Ceramides and diacylglycerols are groups of lipids capable of nucleating and stabilizing ordered lipid domains, structures that have been implicated in a range of biological processes. Previous studies have used fluorescence reporter molecules to explore the influence of ceramide acyl chain structure on sphingolipid-rich ordered phases. Here, we use small-angle neutron scattering (SANS) to examine the ability of ceramides and diacylglycerols to promote lipid domain formation in the well-characterized domain- forming mixture DPPC/DOPC/cholesterol. SANS is a powerful, probe-free technique for interrogating membrane heterogeneity, as it is differentially sensitive to hydrogen\u27s stable isotopes protium and deuterium. Specifcally, neutron contrast is generated through selective deuteration of lipid species, thus enabling the detection of nanoscopic domains enriched in deuterated saturated lipids dispersed in a matrix of protiated un- saturated lipids. Using large unilamellar vesicles, we found that upon replacing 10 mol % DPPC with either C16:0 or C18:0 ceramide, or 16:0 diacylglycerol (dag), lipid domains persisted to higher temperatures. However, when DPPC was replaced with short chain (C6:0 or C12:0) or very long chain (C24:0) ceramides, or ceramides with unsaturated acyl chains of any length (C6:1(3), C6:1(5), C18:1, and C24:1), as well as C18:1-dag, lipid domains were destabilized, melting at lower temperatures than those in the DPPC/DOPC/cholesterol system. These results show how ceramide acyl chain length and unsaturation influence lipid domains, and have implications for how cell membranes might modify their function through the generation of different ceramide species

Analysis of Global Gene Expression in Brachypodium distachyon Reveals Extensive Network Plasticity in Response to Abiotic Stress

Brachypodium distachyon is a close relative of many important cereal crops. Abiotic stress tolerance has a significant impact on productivity of agriculturally important food and feedstock crops. Analysis of the transcriptome of Brachypodium after chilling, high-salinity, drought, and heat stresses revealed diverse differential expression of many transcripts. Weighted Gene Co-Expression Network Analysis revealed 22 distinct gene modules with specific profiles of expression under each stress. Promoter analysis implicated short DNA sequences directly upstream of module members in the regulation of 21 of 22 modules. Functional analysis of module members revealed enrichment in functional terms for 10 of 22 network modules. Analysis of condition-specific correlations between differentially expressed gene pairs revealed extensive plasticity in the expression relationships of gene pairs. Photosynthesis, cell cycle, and cell wall expression modules were down-regulated by all abiotic stresses. Modules which were up-regulated by each abiotic stress fell into diverse and unique gene ontology GO categories. This study provides genomics resources and improves our understanding of abiotic stress responses of Brachypodium