Field application of silicon alleviates drought stress and improves water use efficiency in wheat

Detrimental impacts of drought on crop yield have tripled in the last 50 years with climate models predicting that the frequency of such droughts will intensify in the future. Silicon (Si) accumulation, especially in Poaceae crops such as wheat (Triticum aestivum L.), may alleviate the adverse impacts of drought. We have very limited information, however, about whether Si supplementation could alleviate the impacts of drought under field conditions and no studies have specifically manipulated rainfall. Using field–based rain exclusion shelters, we determined whether Si supplementation (equivalent to 39, 78 and 117 kg ha-1) affected T. aestivum growth, elemental chemistry [Si, carbon (C) and nitrogen (N)], physiology (rates of photosynthesis, transpiration, stomatal conductance, and water use efficiency) and yield (grain production) under ambient and drought (50% of ambient) rainfall scenarios. Averaged across Si treatments, drought reduced shoot mass by 21% and grain production by 18%. Si supplementation increased shoot mass by up to 43% and 73% in ambient and drought water treatments, respectively, and restored grain production in droughted plants to levels comparable with plants supplied with ambient rainfall. Si supplementation increased leaf-level water use efficiency by 32–74%, depending on Si supplementation rates. Water supply and Si supplementation did not alter concentrations of C and N, but Si supplementation increased shoot C content by 39% and 83% under ambient and drought conditions, respectively. This equates to an increase from 6.4 to 8.9 tonnes C ha-1 and from 4.03 to 7.35 tonnes C ha-1 under ambient and drought conditions, respectively. We conclude that Si supplementation ameliorated the negative impacts of drought on T. aestivum growth and grain yield, potentially through its beneficial impacts on water use efficiency. Moreover, the beneficial impacts of Si on plant growth and C storage may render Si supplementation a useful tool for both drought mitigation and C sequestration

A foliar pigment-based bioassay for interrogating chloroplast signalling revealed that carotenoid isomerisation regulates chlorophyll abundance

Background: Some plastid-derived metabolites can control nuclear gene expression, chloroplast biogenesis, and chlorophyll biosynthesis. For example, norfurazon (NFZ) induced inhibition of carotenoid biosynthesis in leaves elicits a protoporphyrin IX (Mg-ProtoIX) retrograde signal that controls chlorophyll biosynthesis and chloroplast development. Carotenoid cleavage products, known as apocarotenoids, also regulate plastid development. The key steps in carotenoid biosynthesis or catabolism that can regulate chlorophyll biosynthesis in leaf tissues remain unclear. Here, we established a foliar pigment-based bioassay using Arabidopsis rosette leaves to investigate plastid signalling processes in young expanding leaves comprising rapidly dividing and expanding cells containing active chloroplast biogenesis. Results: We demonstrate that environmental treatments (extended darkness and cold exposure) as well as chemical (norfurazon; NFZ) inhibition of carotenoid biosynthesis, reduce chlorophyll levels in young, but not older leaves of Arabidopsis. Mutants with disrupted xanthophyll accumulation, apocarotenoid phytohormone biosynthesis (abscisic acid and strigolactone), or enzymatic carotenoid cleavage, did not alter chlorophyll levels in young or old leaves. However, perturbations in acyclic cis-carotene biosynthesis revealed that disruption of CAROTENOID ISOMERASE (CRTISO), but not ZETA-CAROTENE ISOMERASE (Z-ISO) activity, reduced chlorophyll levels in young leaves of Arabidopsis plants. NFZ-induced inhibition of PHYTOENE DESATURASE (PDS) activity caused higher phytoene accumulation in younger crtiso leaves compared to WT indicating a continued substrate supply from the methylerythritol 4-phosphate (MEP) pathway. Conclusion: The Arabidopsis foliar pigment-based bioassay can be used to diferentiate signalling events elicited by environmental change, chemical treatment, and/or genetic perturbation, and determine how they control chloroplast biogenesis and chlorophyll biosynthesis. Genetic perturbations that impaired xanthophyll biosynthesis and/or carotenoid catabolism did not affect chlorophyll biosynthesis. The lack of CAROTENOID ISOMERISATION reduced chlorophyll accumulation, but not phytoene biosynthesis in young leaves of Arabidopsis plants growing under a long photoperiod. Findings generated using the newly customised foliar pigment-based bioassay implicate that carotenoid isomerase activity and NFZ-induced inhibition of PDS activity elicit different signalling pathways to control chlorophyll homeostasis in young leaves of Arabidopsis

Synthetic biology and opportunities within agricultural crops

Conventional breeding techniques have been integral to the development of many agronomically important traits in numerous crops. The adoption of modern biotechnology approaches further advanced and refined trait development and introduction beyond the scope possible through conventional breeding. However, crop yields continue to be challenged by abiotic and biotic factors that require the development of traits that are more genetically complex than can be addressed through conventional breeding or traditional genetic engineering. Therefore, more advanced trait development approaches are required to maintain and improve yields and production efficiency, especially as climate change accelerates the incidence of biotic and abiotic challenges to food and fibre crops. Synthetic biology (SynBio) encompasses approaches that design and construct new biological elements (e.g., enzymes, genetic circuits, cells) or redesign existing biological systems to build new and improved functions. SynBio ‘upgrades’ the potential of genetic engineering, which involves the transfer of single genes from one organism to another. This technology can enable the introduction of multiple genes in a single transgenic event, either derived from a foreign organism or synthetically generated. It can also enable the assembly of novel genomes from the ground up from a set of standardised genetic parts, which can then be transferred into the target cell or organism. New opportunities to advance breeding applications through exploiting SynBio technology include the introduction of new genes of known function, artificially creating genetic variation, topical applications of small RNAs as pesticides and potentially speeding up the production of new cultivars with elite traits. This review will draw upon case studies to demonstrate the potential application of SynBio to improve crop productivity and resistance to various challenges. Here, we outline specific solutions to challenges including fungal diseases, insect pests, heat and drought stress and nutrient acquisition in a range of important crops using the SynBio toolkit

Drought impacts on tree root traits are linked to their decomposability and net carbon release

Root trait plasticity can facilitate plant adjustment to water shortages, but the impact of altered traits on belowground carbon (C) cycling is mostly unknown. While drought and nutrient availability can alter root morphological and chemical traits that may affect root decomposition, direct assessments of drought mediated changes on decomposability are not available. We exposed four tree species contrasting in drought stress tolerance and root traits to three dry-down and recovery periods (over 5 months after 11 months of growth in well-watered conditions) under high and low nutrient conditions. We then assessed early stage root decomposability in relation to their morphology and chemistry as well as implications for CO2 release when accounting for effects on root biomass. While each species showed a unique set of responses, drought generally reduced root diameter and increased nitrogen concentration. We found limited evidence that morphological responses to drought were counteracted by high nutrient supply. Results indicated that the degree of association between morphological and nutrient root trait responses to drought and decomposability varied with different species. However, across these contrasting woody species, drought-induced increases in nitrogen and phosphorus concentrations were associated with drought-induced increases in early stage root decomposability. When accounting for changes in root biomass, estimated overall C loss through root decomposition increased with drought stress. Our experimental results demonstrate that changes in tree root traits with drought can enhance C loss via root decomposition, and with other factors being equal, drought may potentially contribute to a positive feedback to climate change. Our findings contribute empirical evidence to help disentangle the multiple factors involved in root contribution to C balances at the ecosystem level

Sustainable protected cropping : a case study of seasonal impacts on greenhouse energy consumption during capsicum production

Sustainable food production in protected cropping is increasing rapidly in response to global climate change and population growth. However, there are significant knowledge gaps regarding energy consumption while achieving optimum environmental conditions for greenhouse crop production. A capsicum crop cultivated in a high-tech greenhouse facility in Australia was analysed in terms of relationships between key environmental variables and the comparative analysis of energy consumption during different seasons. We showed that daily energy consumption varied due to the seasonal nature of the external environment and maintenance of optimal growing temperatures. Total power consumption reported throughout the entire crop cycle for heating (gas hot water system) and cooling (pad and fan) was 12,503 and 5183 kWh, respectively; hence, heating consumed ca. 70% of the total energy requirement over the 8-month growing period (early spring to late autumn) in the greenhouse facility. Regressions of daily energy consumption within each season, designated either predominantly for heating or cooling, indicated that energy consumption was 14.62 kWh per 1 °C heating and 2.23 kWh per 1 °C cooling. Therefore, changing the planting date to late spring is likely to significantly reduce heating energy costs for greenhouse capsicum growers in Australia. The findings will provide useful guidelines to maximise the greenhouse production of capsicum with better economic return by taking into consideration the potential optimal energy saving strategy during different external environment conditions and seasons

Precise phenotyping for improved crop quality and management in protected cropping : a review

Protected cropping produces more food per land area than field-grown crops. Protected cropping includes low-tech polytunnels utilizing protective coverings, medium-tech facilities with some environmental control, and high-tech facilities such as fully automated glasshouses and indoor vertical farms. High crop productivity and quality are maintained by using environmental control systems and advanced precision phenotyping sensor technologies that were first developed for broadacre agricultural and can now be utilized for protected-cropping applications. This paper reviews the state of the global protected-cropping industry and current precision phenotyping methodology and technology that is used or can be used to advance crop productivity and quality in a protected growth environment. This review assesses various sensor technologies that can monitor and maintain microclimate parameters, as well as be used to assess plant productivity and produce quality. The adoption of precision phenotyping technologies is required for sustaining future food security and enhancing nutritional quality

Prior exposure of Arabidopsis seedlings to mechanical stress heightens jasmonic acid-mediated defense against necrotrophic pathogens

Background: Prolonged mechanical stress (MS) causes thigmomorphogenesis, a stress acclimation response associated with increased disease resistance. What remains unclear is if; 1) plants pre-exposed to a short period of repetitive MS can prime defence responses upon subsequent challenge with necrotrophic pathogens, 2) MS mediates plant immunity via jasmonic acid (JA) signalling, and 3) a short period of repetitive MS can cause long-term changes in gene expression resembling a stress-induced memory. To address these points, 10-days old juvenile Arabidopsis seedlings were mechanically stressed for 7-days using a soft brush and subsequently challenged with the necrotrophic pathogens, Alternaria brassicicola, and Botrytis cinerea. Here we assessed how MS impacted structural cell wall appositions, disease symptoms and altered gene expression in response to infection. Results: The MS-treated plants exhibited enhanced cell wall appositions and jasmonic acid (JA) accumulation that correlated with a reduction in disease progression compared to unstressed plants. The expression of genes involved in JA signalling, callose deposition, peroxidase and phytoalexin biosynthesis and reactive oxygen species detoxification were hyper-induced 4-days post-infection in MS-treated plants. The loss-of-function in JA signalling mediated by the JA-insensitive coronatine-insensitive 1 (coi1) mutant impaired the hyper-induction of defense gene expression and promoted pathogen proliferation in MS-treated plants subject to infection. The basal expression level of PATHOGENESIS-RELATED GENE 1 and PLANT DEFENSIN 1.2 defense marker genes were constitutively upregulated in rosette leaves for 5-days post-MS, as well as in naïve cauline leaves that differentiated from the inflorescence meristem well after ceasing MS. Conclusion: This study reveals that exposure of juvenile Arabidopsis plants to a short repetitive period of MS can alter gene expression and prime plant resistance upon subsequent challenge with necrotrophic pathogens via the JA-mediated COI1 signalling pathway. MS may facilitate a stress-induced memory to modulate the plant’s response to future stress encounters. These data advance our understanding of how MS primes plant immunity against necrotrophic pathogens and how that could be utilised in sustainable agricultural practices

Coordination of hydraulic and morphological traits across dominant grasses in eastern Australia

Leaf hydraulic traits characterize plant drought tolerance and responses to climate change. Yet, plant hydraulics are biased towards northern hemisphere woody species. We collected rhizomes of several perennial grass species along a precipitation gradient in eastern Australia and grew them in an experimental pot study to investigate potential trade-offs between drought tolerance and plant morphology. We measured the following leaf hydraulic traits: the leaf water potential (Ψleaf) at 50% and 88% loss of leaf hydraulic conductance (P50Kleaf and P88Kleaf), the Ψleaf at 50% loss of stomatal conductance (P50gs), leaf turgor loss point (TLP), leaf dry matter content (LDMC), leaf modulus of elasticity (ε), and the slope of the relationship between predawn and midday Ψleaf. We also measured basal area, tiller density, seed head density, root collar diameter, plant height, and aboveground biomass of each individual. As expected, grass species varied widely in leaf-level drought tolerance, with loss of 88% hydraulic conductance occurring at a Ψleaf ranging from −1.52 to −4.01 MPa. However, all but one species lost leaf turgor, and most reached P50gs before this critical threshold. Taller more productive grass species tended to have drought vulnerable leaves characterized by low LDMC and less negative P88Kleaf. Species with greater tiller production experienced stomatal closure and lost turgor at more negative Ψleaf. Although our sample size was limited, we found no relationships between these species' traits and their climate of origin. Overall, we identified important hydraulic and morphological trade-offs in Australian grasses that were surprisingly similar to those observed for woody plants: (1) xylem of taller species was less drought tolerant and (2) turgor loss occurs and stomatal closure begins before significant loss of Kleaf. These data build upon a small yet growing field of grass hydraulics and may be informative of species responses to further drought intensification in Australia. Read the free Plain Language Summary for this article on the Journal blog

Unlocking drought-induced tree mortality : physiological mechanisms to modeling

Drought-related tree mortality has become a major concern worldwide due to its pronounced negative impacts on the functioning and sustainability of forest ecosystems. However, our ability to identify the species that are most vulnerable to drought, and to pinpoint the spatial and temporal patterns of mortality events, is still limited. Model is useful tools to capture the dynamics of vegetation at spatiotemporal scales, yet contemporary land surface models (LSMs) are often incapable of predicting the response of vegetation to environmental perturbations with sufficient accuracy, especially under stressful conditions such as drought. Significant progress has been made regarding the physiological mechanisms underpinning plant drought response in the past decade, and plant hydraulic dysfunction has emerged as a key determinant for tree death due to water shortage. The identification of pivotal physiological events and relevant plant traits may facilitate forecasting tree mortality through a mechanistic approach, with improved precision. In this review, we (1) summarize current understanding of physiological mechanisms leading to tree death, (2) describe the functionality of key hydraulic traits that are involved in the process of hydraulic dysfunction, and (3) outline their roles in improving the representation of hydraulic function in LSMs. We urge potential future research on detailed hydraulic processes under drought, pinpointing corresponding functional traits, as well as understanding traits variation across and within species, for a better representation of drought-induced tree mortality in models

Elevated CO2 did not stimulate stem growth in 11 provenances of a globally important hardwood plantation species

Elevated atmospheric carbon dioxide (eCO2) often enhances rates of photosynthesis leading to increased productivity in trees. In their native habitats in Australia, eucalypts display considerable phenotypic plasticity in response to changes in environmental conditions. Little is known whether this plasticity can be harnessed effectively under future atmospheric eCO2 conditions and be used to identify provenances with superior growth. Here, we report two experiments that assessed the physiological and growth responses of Eucalyptus grandis—one of the world's most important hardwood plantation species—to eCO2. We used 11 provenances from contrasting climates. Our selection was based on site-specific information of long-term temperature and water availability. In Experiment 1, four provenances exhibited significant variation in light-saturated photosynthetic rates (Asat), stomatal conductance (gs), and concentrations of non-structural carbohydrates in leaves, stems and roots when grown under ambient CO2 (aCO2). Biomass of leaves, stems and roots varied significantly and were negatively correlated with mean annual temperature (MAT) at seed origin, indicating that provenances from cooler, wetter climates generally produced greater biomass. Yet, stem growth of these provenances was not stimulated by eCO2. Given the vast environmental gradient covered by provenances of E. grandis, we expanded the selection from four to nine provenances in Experiment 2. This allowed us to validate results from Experiment 1 with its small selection and detailed measurements of various physiological parameters by focusing on growth responses to eCO2 across a wider environmental gradient in Experiment 2. In Experiment 2, nine provenances also exhibited intraspecific differences in growth, but these were not related to climate of origin, and eCO2 had little effect on growth traits. Growth responses under eCO2 varied widely across provenances in both experiments, confirming phenotypic plasticity in E. grandis, though responses were not systematically correlated with climate of origin. These results indicate that selection of provenances for improved stem growth of E. grandis under future eCO2 cannot be based solely on climate of origin, as is common practice for other planted tree species