The Inverse Born Approximation: Exact Determination of Shape of Convex Voids

The Inverse Born Approximation (IBA) to the elastic wave inverse scattering problem is known to give highly accurate results for the shape of complex voids. In this paper we present an argument demonstrating that the IBA is, in fact, exact for determining the size, shape and orientation of a wide class of these scatterers given infinite bandwidth and unlimited aperture information. Essentially, our argument demonstrates how the IBA algorithm picks out the singular contribution to the impulse response function and correctly relates it to the shape of the scatterer. Some specific examples will be used to illustrate the more intuitive aspects of the discussion

The informatics challenges facing biobanks:a perspective from a United Kingdom biobanking network

The challenges facing biobanks are changing from simple collections of materials to quality-assured fit-for-purpose clinically annotated samples. As a result, informatics awareness and capabilities of a biobank are now intrinsically related to quality. A biobank may be considered a data repository, in the form of raw data (the unprocessed samples), data surrounding the samples (processing and storage conditions), supplementary data (such as clinical annotations), and an increasing ethical requirement for biobanks to have a mechanism for researchers to return their data. The informatics capabilities of a biobank are no longer simply knowing sample locations; instead the capabilities will become a distinguishing factor in the ability of a biobank to provide appropriate samples. There is an increasing requirement for biobanking systems (whether in-house or com-mercially sourced) to ensure the informatics systems stay apace with the changes being experienced by the biobanking community. In turn, there is a requirement for the biobanks to have a clear informatics policy and directive that is embedded into the wider decision making process. As an example, the Breast Cancer Campaign Tissue Bank in the UK was a collaboration between four individual and diverse biobanks in the UK, and an informatics platform has been developed to address the challenges of running a distributed network. From developing such a system there are key observations about what can or cannot be achieved by informatics in isolation. This article will highlight some of the lessons learned during this development process

Magnesium oxide loaded mesoporous silica: Synthesis, characterisation and use in removing lead and cadmium from water supplies

Water pollution by potentially toxic elements such as cadmium (Cd) and lead (Pb) is a persistent problem in many parts of the world. It continues to have profound implications for drinking water supplies, wastewater discharge and environmental quality of rivers and lakes. Treatment is routinely needed but is not always accessible or practical for a given location or situation, hence new treatment options are the focus of much research. Nanotechnology has great potential to enhance water purification and decontamination efficiency. Nanomaterials have been shown to efficiently remove organic and inorganic pollutants, including metals, from contaminated waters but they can have a tendency to flocculate and thereby lose removal efficiency. Research aimed at stabilising nanoparticles into matrices such as silica offers a way forward. In this study, mesoporous silica (mSiO2, also referred to as MCM-41) was prepared and loaded with magnesium oxide nanoparticles (MgO-NP) to form a MgO-silica composite (MgO-mSiO2) and characterised using UV–Vis, FTIR, XRD, BET, and SEM techniques. The MgO-NP, mSiO2 and MgO-mSiO2 were then evaluated for their Cd and Pb removal capacity across varying conditions of pH, metal concentration, adsorbent: solution volume ratio and contact time. Sorption data were evaluated using the Freundlich, Langmuir and Temkin isotherm models. The MgO-mSiO2 was found to have a very high sorption capacity across the conditions tested, with >99% Cd removal across pH range 3–9 and >99% Pb removal across pH range 5–9. When tested at pH 6–7, the MgO-mSiO2 achieved nearly 100% adsorption efficiencies across the contact times tested (15–180 min)

Entangled-State Cycles of Atomic Collective-Spin States

We study quantum trajectories of collective atomic spin states of $N$ effective two-level atoms driven with laser and cavity fields. We show that interesting ``entangled-state cycles'' arise probabilistically when the (Raman) transition rates between the two atomic levels are set equal. For odd (even) $N$, there are $(N+1)/2$ ($N/2$) possible cycles. During each cycle the $N$-qubit state switches, with each cavity photon emission, between the states $(|N/2,m>\pm |N/2,-m>)/\sqrt{2}$, where $|N/2,m>$ is a Dicke state in a rotated collective basis. The quantum number $m$ ($>0$), which distinguishes the particular cycle, is determined by the photon counting record and varies randomly from one trajectory to the next. For even $N$ it is also possible, under the same conditions, to prepare probabilistically (but in steady state) the Dicke state $|N/2,0>$, i.e., an $N$-qubit state with $N/2$ excitations, which is of particular interest in the context of multipartite entanglement.Comment: 10 pages, 9 figure

Molecular evolution of HoxA13 and the multiple origins of limbless morphologies in amphibians and reptiles

Developmental processes and their results, morphological characters, are inherited through transmission of genes regulating development. While there is ample evidence that cis-regulatory elements tend to be modular, with sequence segments dedicated to different roles, the situation for proteins is less clear, being particularly complex for transcription factors with multiple functions. Some motifs mediating protein-protein interactions may be exclusive to particular developmental roles, but it is also possible that motifs are mostly shared among different processes. Here we focus on HoxA13, a protein essential for limb development. We asked whether the HoxA13 amino acid sequence evolved similarly in three limbless clades: Gymnophiona, Amphisbaenia and Serpentes. We explored variation in ω (dN/dS) using a maximum-likelihood framework and HoxA13sequences from 47 species. Comparisons of evolutionary models provided low ω global values and no evidence that HoxA13 experienced relaxed selection in limbless clades. Branch-site models failed to detect evidence for positive selection acting on any site along branches of Amphisbaena and Gymnophiona, while three sites were identified in Serpentes. Examination of alignments did not reveal consistent sequence differences between limbed and limbless species. We conclude that HoxA13 has no modules exclusive to limb development, which may be explained by its involvement in multiple developmental processes

Measuring the effectiveness of in-hospital and on-base Prevent Alcohol and Risk-related Trauma in Youth (P.A.R.T.Y.) programs on reducing alcohol related harms in naval trainees: P.A.R.T.Y. Defence study protocol

Abstract Background Reducing alcohol related harms in Australian Defence Force (ADF) trainees has been identified as a priority, but there are few evidence-based prevention programs available for the military setting. The study aims to test whether the P.A.R.T.Y. program delivered in-hospital or on-base, can reduce harmful alcohol consumption among ADF trainees. Methods/design The study is a 3-arm randomized controlled trial, involving 953 Royal Australian Navy trainees from a single base. Trainees, aged 18 to 30 years, will be randomly assigned to the study arms: i. in-hospital P.A.R.T.Y.; ii. On-base P.A.R.T.Y.; and iii. Control group. All groups will receive the routine ADF annual alcohol awareness training. The primary outcome is the proportion of participants reporting an Alcohol Use Disorders Identification Test (AUDIT) score of 8 or above at 12 months’ post-intervention. The secondary outcome is the number of alcohol related incidents reported to the Royal Australian Navy (RAN) in the 12 months’ post-intervention. Discussion This is the first trial of the use of the P.A.R.T.Y. program in the military. If the proposed intervention proves efficacious, it may be a useful program in the early education of RAN trainees. Trial registration Australian New Zealand Clinical Trials Registry (ANZCTR): ACTRN12614001332617 , date of registration: 18/12/2014 ‘retrospectively registered’