Methodological Issues in Multistage Genome-Wide Association Studies

Because of the high cost of commercial genotyping chip technologies, many investigations have used a two-stage design for genome-wide association studies, using part of the sample for an initial discovery of ``promising'' SNPs at a less stringent significance level and the remainder in a joint analysis of just these SNPs using custom genotyping. Typical cost savings of about 50% are possible with this design to obtain comparable levels of overall type I error and power by using about half the sample for stage I and carrying about 0.1% of SNPs forward to the second stage, the optimal design depending primarily upon the ratio of costs per genotype for stages I and II. However, with the rapidly declining costs of the commercial panels, the generally low observed ORs of current studies, and many studies aiming to test multiple hypotheses and multiple endpoints, many investigators are abandoning the two-stage design in favor of simply genotyping all available subjects using a standard high-density panel. Concern is sometimes raised about the absence of a ``replication'' panel in this approach, as required by some high-profile journals, but it must be appreciated that the two-stage design is not a discovery/replication design but simply a more efficient design for discovery using a joint analysis of the data from both stages. Once a subset of highly-significant associations has been discovered, a truly independent ``exact replication'' study is needed in a similar population of the same promising SNPs using similar methods.Comment: Published in at http://dx.doi.org/10.1214/09-STS288 the Statistical Science (http://www.imstat.org/sts/) by the Institute of Mathematical Statistics (http://www.imstat.org

The politics of failure : strategic nuclear arms control, public opinion, and domestic politics in the United States : 1945-1980

Thesis (Ph. D.)--Massachusetts Institute of Technology, Dept. of Political Science, 1989.Includes bibliographical references (leaves 538-560).by Thomas Wallace Graham.Ph.D

ABM & Star Wars, 1945-1985

Includes bibliographical reference

Lasing and cooling in a hot cavity

We present a microscopic laser model for many atoms coupled to a single cavity mode, including the light forces resulting from atom-field momentum exchange. Within a semiclassical description, we solve the equations for atomic motion and internal dynamics to obtain analytic expressions for the optical potential and friction force seen by each atom. When optical gain is maximum at frequencies where the light field extracts kinetic energy from the atomic motion, the dynamics combines optical lasing and motional cooling. From the corresponding momentum diffusion coefficient we predict sub-Doppler temperatures in the stationary state. This generalizes the theory of cavity enhanced laser cooling to active cavity systems. We identify the gain induced reduction of the effective resonator linewidth as key origin for the faster cooling and lower temperatures, which implys that a bad cavity with a gain medium can replace a high-Q cavity. In addition, this shows the importance of light forces for gas lasers in the low-temperature limit, where atoms can arrange in a periodic pattern maximizing gain and counteracting spatial hole burning. Ultimately, in the low temperature limit, such a setup should allow to combine optical lasing and atom lasing in single device.Comment: 11 pages, 6 figure

Muons in supernovae: implications for the axion-muon coupling

The high temperature and electron degeneracy attained during a supernova allow for the formation of a large muon abundance within the core of the resulting proto-neutron star. If new pseudoscalar degrees of freedom have large couplings to the muon, they can be produced by this muon abundance and contribute to the cooling of the star. By generating the largest collection of supernova simulations with muons to date, we show that observations of the cooling rate of SN 1987A place strong constraints on the coupling of axion-like particles to muons, limiting the coupling to $g_{a\mu} < 10^{-8.1}~\text{GeV}^{-1}$.Comment: 8 pages, 7 figures. v2: Error fixed, results and figures updated; updated discussion of CMB bounds. v3: Updated references. v4: Updated to match published versio

Which anthropometric and lower body power variables are predictive of professional and amateur playing status in male rugby union players?

The purpose of this study was to compare anthropometric and lower body power measurements between current professional and amateur male rugby union players. The present study also sought to determine which anthropometric and physical performance variables were predictive of playing standard. Thirty professional and 30 amateur RU players performed Wattbike 6 s maximal effort (WB6S) and countermovement (CMJ) and squat jump (SJ) assessments, anthropometric measures were also taken. Dependant variables recorded and analysed including: body mass, stature, Σ8 site skinfolds, WB6S absolute and relative peak power, CMJ and SJ average concentric force, jump height, peak velocity, time to peak force, rate of force development (RFD) and absolute and relative peak force and power. Professional players were heavier, taller and leaner than their amateur counterparts (p < 0.05). Professional players performed significantly better in all physical performance measures except CMJ and SJ time to peak force, CMJ RFD and SJ relative peak force. Variables which were predictive of playing standard were: Σ8 skinfolds, CMJ peak velocity and WB6S absolute and relative peak power (p < 0.05). These findings indicate that the current body of male professional RU players is anthropometrically and physically superior to their amateur counterparts, although not all variables assessed here were predictive of playing standard. Data presented here indicate that Σ8 skinfolds, WB6S absolute and relative power and CMJ peak velocity are predictive of playing standard, whereas other anthropometric and strength and power variables are not

Novel Reproductive Data on Pealip Redhorse, Moxostoma pisolabrum (Cypriniformes: Catostomidae), from Northeastern Arkansas

Little is known about the natural history of the Pealip Redhorse (Moxostoma pisolabrum), particularly on its reproductive biology in Arkansas. We examined 11 female M. pisolabrum collected in late February 2020 and 2021 from the Black River, Lawrence County. Egg mass (g) represented 9‒14% of the total weight of these gravid females. This is the first time information on female reproduction in this species has been reported from any population of M. pisolabrum in the state