Predicting zinc-enhanced maize hybrid performance under stress conditions

The low yield potential of most biofortified maize is a barrier to its full adoption and reduces its potential to curb various macro- and micronutrient deficiencies highly prevalent in low-income regions of the world, such as sub-Saharan Africa (SSA). By crossing biofortified inbred lines with different nutritional attributes such as zinc (Zn), provitamin A and protein quality, breeders are attempting to develop agronomically superior and stable multi-nutrient maize of different genetic backgrounds. A key question, however, is the relationship between the biofortified inbred lines per se and hybrid performance under stress and non-stress conditions. In this study, inbred line per se and testcross performance were evaluated for grain yield and secondary traits of Zn-enhanced normal, provitamin A and quality protein maize (QPM) hybrids and estimated heterosis under combined heat and drought (HMDS) and well-watered (WW) conditions. Responses of all secondary traits, except for the number of days to mid-anthesis, significantly differed for HMDS and WW conditions. The contribution of heterosis to grain yield was highly significant under both management levels, although higher mid and high-parent heterosis was observed under WW than HMDS conditions. However, the findings suggest that inbred line performance was the best determinant of hybrid performance under HMDS. Strong correlations were observed between grain yield and secondary traits for both parents and hybrids, and between secondary traits of inbred lines and hybrids under both management levels, indicating that hybrid performance can be predicted based on intrinsic inbred line performance. Phenotypic correlation between grain yield of inbred lines and hybrids was higher under HMDS than WW conditions. This study demonstrated that under HMDS conditions, performance of Zn-enhanced hybrids could be predicted based on the performance of their corresponding inbred lines. However, the parental inbred lines should be systematically selected for desirable secondary traits correlated with HMDS tolerance during inbred line development

Combining ability and testcross performance of multi-nutrient maize under stress and non-stress environments

While significant progress has been made by several international breeding institutions in improving maize nutritional quality, stacking of nutritional traits like zinc (Zn), quality protein, and provitamin A has not received much attention. In this study, 11 newly introduced Zn-enhanced inbred lines were inter-mated with seven testers from normal, provitamin A and quality protein maize (QPM) nutritional backgrounds in order to estimate the general combining ability (GCA) and specific combining ability (SCA) for grain yield (GY) and secondary traits under stress conditions [(combined heat and drought stress (HMDS) and managed low nitrogen (LN)] and non-stress conditions [(summer rainfed; OPT) and well-watered (irrigated winter; WW)] in Zimbabwe. Lines L6 and L7 had positive GCA effects for GY and secondary traits under OPT and LN conditions, and L8 and L9 were good general combiners for GY under HMDS conditions. Superior hybrids with high GY and desirable secondary traits were identified as L10/T7 and L9/T7 (Zn x normal), L2/T4, L4/T4, L3/T5 (Zn x provitamin A), and L8/T6 and L11/T3 (Zn x QPM), suggesting the possibility of developing Zn-enhanced hybrids with high yield potential using different nutritional backgrounds. Both additive and dominance gene effects were important in controlling most of the measured traits. This suggests that selecting for desirable traits during inbred line development followed by hybridization and testing of specific crosses under different management conditions could optimize the breeding strategy for stacked nutritionally-enhanced maize genotypes

Near-infrared spectroscopy to predict provitamin A carotenoids content in maize

Vitamin A deficiency (VAD) is a public health issue worldwide. Provitamin A (PVA) biofortified maize serves as an alternative to help combat VAD. Breeding efforts to develop maize varieties with high PVA carotenoid content combine molecular and phenotypic selection strategies. The phenotypic assessment of carotenoids is currently done using liquid chromatography, a precise but time-and resource-consuming methodology. Using near-infrared spectroscopy (NIRS) could increase the breeding efficiency. This study used ultra-performance liquid chromatography (UPLC) data from 1857 tropical maize genotypes as a training set and NIRS data to do an independent test of a set of 650 genotypes to predict PVA carotenoids using Bayesian and modified partial least square (MPLS) regression models. Both regression methods produced similar prediction accuracies for the total carotenoids (r2 = 0.75), lutein (r2 = 0.55), zeaxanthin (r2 = 0.61), β-carotene (r2 = 0.22) and β-cryptoxanthin (BCX) (r2 = 0.57). These results demonstrate that Bayesian and MPLS regression of BCX on NIRS data can be used to predict BCX content, the current focus on PVA enhancement, and thus offers opportunities for high-throughput phenotyping at a low cost, especially in the early stages of PVA maize breeding pipeline when many genotypes must be screened

Genetic trends in the Zimbabwe’s national maize breeding program over two decades

Monitoring genetic gains within breeding programs is a critical component for continuous improvement. While several national breeding programs in Africa have assessed genetic gain using era studies, this study is the first to use two decades of historical data to estimate genetic trends within a national breeding program. The objective of this study was to assess genetic trends within the final two stages of Zimbabwe’s Department of Research & Specialist Services maize breeding pipeline between 2002 and 2021. Data from 107 intermediate and 162 advanced variety trials, comprising of 716 and 398 entries, respectively, was analyzed. Trials were conducted under optimal, managed drought stress, low nitrogen stress, low pH, random stress, and disease pressure (maize streak virus (MSV), grey leaf spot (GLS), and turcicum leaf blight under artificial inoculation. There were positive and significant genetic gains for grain yield across management conditions (28–35 kg ha-1 yr-1), under high-yield potential environments (17–61 kg ha-1 yr-1), and under low-yield potential environments (0–16 kg ha-1 yr-1). No significant changes were observed in plant and ear height over the study period. Stalk and root lodging, as well as susceptibility to MSV and GLS, significantly decreased over the study period. New breeding technologies need to be incorporated into the program to further increase the rate of genetic gain in the maize breeding programs and to effectively meet future needs

Genetic trends in CIMMYT’s tropical maize breeding pipelines

Fostering a culture of continuous improvement through regular monitoring of genetic trends in breeding pipelines is essential to improve efficiency and increase accountability. This is the first global study to estimate genetic trends across the International Maize and Wheat Improvement Center (CIMMYT) tropical maize breeding pipelines in eastern and southern Africa (ESA), South Asia, and Latin America over the past decade. Data from a total of 4152 advanced breeding trials and 34,813 entries, conducted at 1331 locations in 28 countries globally, were used for this study. Genetic trends for grain yield reached up to 138 kg ha−1 yr−1 in ESA, 118 kg ha−1 yr−1 South Asia and 143 kg ha−1 yr−1 in Latin America. Genetic trend was, in part, related to the extent of deployment of new breeding tools in each pipeline, strength of an extensive phenotyping network, and funding stability. Over the past decade, CIMMYT’s breeding pipelines have significantly evolved, incorporating new tools/technologies to increase selection accuracy and intensity, while reducing cycle time. The first pipeline, Eastern Africa Product Profile 1a (EA-PP1a), to implement marker-assisted forward-breeding for resistance to key diseases, coupled with rapid-cycle genomic selection for drought, recorded a genetic trend of 2.46% per year highlighting the potential for deploying new tools/technologies to increase genetic gain

Genotype x environment interaction and yield stability of normal and biofortified maize inbred lines in stress and non-stress environments

AbstractBreeding for nutrient-dense maize cultivars is reliant on introductions of exotic inbred lines enhanced with high levels of the targeted nutrients. Sometimes, the exotic nutrient donor germplasm may not adapt well in new growing environments, thereby reducing seed production when used in hybrid combinations. Therefore, evaluating introduced trait donors for adaptation, through genotype × environment interaction (GEI) analysis is crucial in breeding for quality traits. The objectives of this study were to (i) evaluate grain yield performance of introduced zinc-enhanced, provitamin A, normal and quality protein maize lines across stress and non-stress environments in Zimbabwe, (ii) assess the presence of GEI and (iii) identify high yielding and stable lines that could be used for developing Zn-enhanced hybrids with improved seed producibility. Additive main effects and multiplicative interaction (AMMI) and genotype plus genotype × environment interaction (GGE) biplot analyses were used for stability analysis. GEI effects were highly significant (P ≤ 0.01) for grain yield. Grain yields for the inbred lines ranged from 1.28 to 3.5 t ha−1. The Zn donor G11 (ITZN313) had the highest grain yield of 3.5 t ha−1 across environments, whereas the normal check G24 (CZL1111) had the lowest grain yield. G2 (CLWQHZN14), G4 (CLWQHZN19), G8 (OBATANPA6), G11 (ITZN313) and G18 (CML546) were stable and high yielding and can be used for developing Zn-enhanced hybrids. Five mega-environments were identified, clearly separating stress and non-stress environments. E11 (Chisumbanje WW) was the most discriminating and representative test environment and could be used to identify superior genotypes

Construction of a generalised farm typology to aid selection, targeting and scaling of onfarm research

Farm typologies are often used to reduce the complexity in categorising diverse farming systems, particularly in sub-Saharan Africa. The resulting typologies can then be used in multiple ways including designing efficient sampling schemes that capture the diversity in smallholder farms, prescribing the selection of certain farm types to which interventions can be targeted or upscaled, or to give context into derived relationships. However, the construction of farm typologies consists of many subjective decisions that are not always obvious or evident to the end-user. By developing a generalized framework for constructing farm typologies, we clarify where these subjective decisions are and quantify the impact they have on the resulting typologies. Further, this framework has been encapsulated in the open source RShiny App: TypologyGenerator to enable users to focus on the decisions and not the underlying implementation

Multinutrient Biofortification of Maize (Zea mays L.) in Africa: Current Status, Opportunities and Limitations

Macro and micronutrient deficiencies pose serious health challenges globally, with the largest impact in developing regions such as subSaharan Africa (SSA), Latin America and South Asia. Maize is a good source of calories but contains low concentrations of essential nutrients. Major limiting nutrients in maize-based diets are essential amino acids such as lysine and tryptophan, and micronutrients such as vitamin A, zinc (Zn) and iron (Fe). Responding to these challenges, separate maize biofortification programs have been designed worldwide, resulting in several cultivars with high levels of provitamin A, lysine, tryptophan, Zn and Fe being commercialized. This strategy of developing single-nutrient biofortified cultivars does not address the nutrient deficiency challenges in SSA in an integrated manner. Hence, development of maize with multinutritional attributes can be a sustainable and cost-effective strategy for addressing the problem of nutrient deficiencies in SSA. This review provides a synopsis of the health challenges associated with Zn, provitamin A and tryptophan deficiencies and link these to vulnerable societies; a synthesis of past and present intervention measures for addressing nutrient deficiencies in SSA; and a discussion on the possibility of developing maize with multinutritional quality attributes, but also with adaptation to stress conditions in SSA

Genetic Variation of Zinc and Iron Concentration in Normal, Provitamin A and Quality Protein Maize under Stress and Non-Stress Conditions

The negative impacts of zinc (Zn) and iron (Fe) deficiency due to over-reliance on monotonous cereal-based diets are well-documented. Increasing micronutrient densities in maize is currently among top breeders’ priorities. Here, 77 single-cross Zn-enhanced hybrids with normal, provitamin A and quality protein maize genetic backgrounds were evaluated together with seven checks for grain Zn and Fe concentration and agronomic traits under optimum, low nitrogen (N) and managed drought conditions. Results showed a fairly wide variability for grain Zn (10.7–57.8 mg kg−1) and Fe (7.1–58.4 mg kg−1) concentration amongst the hybrids, across management conditions. Notable differences in Zn concentration were observed between the Zn-enhanced quality protein maize (QPM) (31.5 mg kg−1), Zn-enhanced provitamin A maize (28.5 mg kg−1), Zn-enhanced normal maize (26.0 mg kg−1) and checks (22.9 mg kg−1). Although checks showed the lowest micronutrient concentration, they were superior in grain yield (GY) performance, followed by Zn-enhanced normal hybrids. Genotypes grown optimally had higher micronutrient concentrations than those grown under stress. Genotype × environment interaction (G × E) was significant (p ≤ 0.01) for GY, grain Zn and Fe concentration, hence micronutrient-rich varieties could be developed for specific environments. Furthermore, correlation between grain Zn and Fe was positive and highly significant (r = 0.97; p ≤ 0.01) suggesting the possibility of improving these traits simultaneously. However, the negative correlation between GY and grain Zn (r = −0.44; p ≤ 0.01) and between GY and grain Fe concentration (r = −0.43; p ≤ 0.01) was significant but of moderate magnitude, suggesting slight dilution effects. Therefore, development of high yielding and micronutrient-dense maize cultivars is possible, which could reduce the highly prevalent micronutrient deficiency in sub-Saharan Africa (SSA)