PHYTOTHERAPY IN FUNGI AND FUNGAL DISEASE: A REVIEW OF EFFECTIVE MEDICINAL PLANTS ON IMPORTANT FUNGAL STRAINS AND DISEASES

Infectious diseases are among the most important common diseases worldwide that bring stupendous costs for human community. Medicinal plants are considered a rich source of antimicrobial agents and therefore can be used as antimicrobial remedies because of producing secondary metabolites. This article was designed to review the effective medicinal plants on fungi and fungal disease. In this study, the relevant articles published in Persian and English languages were searched for in the databases Magiran, Iranmedex, Irandoc, PubMed, Scopus, SID, Web of Science, and Science Direct using the search engine Google Scholar. To maximize the comprehensiveness of the search, the general terms antimicrobial, dermatophyte, mycotic, Iran, and anti-Candida as well as their Persian equivalents were used. AND and OR were used for combining searches. Medicinal herbs such as Zataria multiflora, Thymus vulgaris, Thymus kotschyanus, Punicagranatum L., Rosmarinus officinalis L., Matricaria chamomilla L., Urtica dioica L., Mentha piperita L. and Salvia officinalis L., Thymus vulgaris, Salvia officinalis, Eucalyptus globulus, Myentha piperita, Oliveria decumbens, Echinophora Platyloba, Thymus eriocalyx and Thymus X-porlock, Achillea millefolium, Artemisia sieberi, Cuminum cyminum, Nigella sativa, Heracleum persicum, Hyssopus officinalis, Matricaria recutital, Menta spicata, Foeniculum vulgare, Pimpinella anisum, Plargonium graveolens, Rosmarinus officinalis, Saturia hortensis, Zataria multiflora, Thymus kotschyanus, Zataria multiflora, Ziziphora clinopodioides, Mentha piperita L., Physalis alkekengi L., Hymenocrater longiflorus Benth and are the most important Medicinal herbs effective on fungal diseases. Medicinal herbs mentioned in this study due to phenolic compounds and antioxidant activities have antifungal effects

Evaluating the immunity against hepatitis B virus among Yasuj University of Medical Sciences students-2014

Background & Aim:  Hepatitis B virus vaccination, Ab titer of particular importance in health care workers is high. Due to the fact that the rate of immunization against the disease is not directly measurable, the presence of detectable levels of antibody in the serum of the vaccinated individual, the individual's immunity against disease is considered to be equivalent. The aim of this study was to evaluating the immunity against hepatitis B virus among Yasuj University of Medical Sciences students. Methods: In this cross - sectional study using purposive sampling 120 students input 2007-2010 were selected. After completing a questionnaire including demographic information and immunization records 5 ml of blood was taken. After separating serum using an ELISA kit specific antibody levels were measured against hepatitis B virus. The data collected was analyzed using descriptive statistics, chi-square test and analysis of variance. Results: In 74.16% of students the specific IgG Ab against the hepatitis B virus surface Ag were more than 20 IU/L, which is secure and in 19.16% of  them the Ab titer was below 10 IU/L which is non immune and  in 6.68% of students the Ab titer was between 10-20 IU/L that were borderline. Also in those who had received complete vaccination, immunization rates were     96.67 %. Conclusion: This study showed if vaccination against hepatitis B was complete, would be a high degree of immunity

Genome-Wide CpG Island Methylation Profiles of Cutaneous Skin with and without HPV Infection

HPV infection is one of the most commonly transmitted diseases among the global population. While it can be asymptomatic, non-genital HPV infection often gives rise to cutaneous warts, which are benign growths arising from the epidermal layer of the skin. This study aimed to produce a global analysis of the ways in which cutaneous wart formation affected the CpG island methylome. The Infinium MethylationEPIC BeadChip microarray was utilized in order to quantitatively interrogate CpG island methylation in genomic DNA extracted from 24 paired wart and normal skin samples. Differential methylation analysis was carried out by means of assigning a combined rank score using RnBeads. The 1000 top-ranking CpG islands were then subject to Locus Overlap Analysis (LOLA) for enrichment of genomic ranges, while signaling pathway analysis was carried out on the top 100 differentially methylated CpG islands. Differential methylation analysis illustrated that the most differentially methylated CpG islands in warts lay within the ITGB5, DTNB, RBFOX3, SLC6A9, and C2orf27A genes. In addition, the most enriched genomic region sets in warts were Sheffield’s tissue-clustered DNase hypersensitive sites, ENCODE’s segmentation and transcription factor binding sites, codex sites, and the epigenome sites from cistrome. Lastly, signaling pathway analysis showed that the GRB2, GNB1, NTRK1, AXIN1, and SKI genes were the most common regulators of the genes associated with the top 100 most differentially methylated CpG islands in warts. Our study shows that HPV-induced cutaneous warts have a clear CpG island methylation profile that sets them apart from normal skin. Such a finding could account for the temporary nature of warts and the capacity for individuals to undergo clinical remission

Integrative analysis of gene expression and DNA methylation to identify biomarkers of non-genital warts induced by low-risk human papillomaviruses infection

Background: Human papillomaviruses have been shown to dysregulate the gene expression and DNA methylation profiles of their host cells over the course of infection. However, there is a lack of information on the impact of low-risk HPV infection and wart formation on host cell's expression and methylation patterns. Therefore, the objective of this study is to analyse the genome and methylome of common warts using an integrative approach. Methods: In the present study, gene expression (GSE136347) and methylation (GSE213888) datasets of common warts were obtained from the GEO database. Identification of the differentially expressed and differentially methylated genes was carried out using the RnBeads R package and the edgeR Bioconductor package. Next, functional annotation of the identified genes was obtained using the Database for Annotation, Visualization, and Integrated Discovery (DAVID). Network construction and analyses of the gene-gene, protein-protein, and signaling interactions of the differentially expressed and differentially methylated genes was performed using the GeneMANIA web interface, the Search Tool for the Retrieval of Interacting Genes/Proteins (STRING) database, and the Signaling Network Open Resource 2.0 (SIGNOR 2.0), respectively. Lastly, significant hub genes were identified using the Cytoscape application CytoHubba. Results: A total of 276 genes were identified as differentially expressed and differentially methylated in common warts, with 52% being upregulated and hypermethylated. Functional enrichment analysis identified extracellular components as the most enriched annotations, while network analyses identified ELN, ITGB1, TIMP1, MMP2, LGALS3, COL1A1 and ANPEP as significant hub genes. Conclusions: To the best knowledge of the authors, this is the first integrative study to be carried out on non-genital warts induced by low-risk HPV types. Future studies are required to re-validate the findings in larger populations using alternative approaches