5,834 research outputs found
Spin Gap of S=1/2 Heisenberg Model on Distorted Diamond Chain
We study the spin gap of the S=1/2 Heisenberg model on the distorted diamond
chain, which is recently proposed to represent magnetic properties of Cu_3 Cl_6
(H_2 O)_2 2H_8 C_4 SO_2. This model is composed of stacked trimers and has
three kinds of exchange interactions J_1, J_2 and J_3. Using the numerical
diagonalization, we obtain a contour map of the spin gap in the J_2/J_1-J_3/J_1
plane. We argue possible values of the exchange constants based on the contour
map and the observed value of the spin gap.Comment: 2 pages, 4 figure
Residue network in protein native structure belongs to the universality class of three dimensional critical percolation cluster
A single protein molecule is regarded as a contact network of amino-acid
residues. Some studies have indicated that this network is a small world
network (SWN), while other results have implied that this is a fractal network
(FN). However, SWN and FN are essentially different in the dependence of the
shortest path length on the number of nodes. In this paper, we investigate this
dependence in the residue contact networks of proteins in native structures,
and show that the networks are not SWN but FN. FN is generally characterized by
several dimensions. Among them, we focus on three dimensions; the network
topological dimension , the fractal dimension , and the spectral
dimension . We find that proteins universally yield ,
and . These values are in surprisingly good
coincidence with those in three dimensional critical percolation cluster. Hence
the residue contact networks in the protein native structures belong to the
universality class of three dimensional percolation cluster. The criticality is
relevant to the ambivalent nature of the protein native structures, i.e., the
coexistence of stability and instability, both of which are necessary for a
protein to function as a molecular machine or an allosteric enzyme.Comment: 4 pages, 3 figure
Documentation of the GLAS fourth order general circulation model. Volume 2: Scalar code
Volume 2, of a 3 volume technical memoranda contains a detailed documentation of the GLAS fourth order general circulation model. Volume 2 contains the CYBER 205 scalar and vector codes of the model, list of variables, and cross references. A variable name dictionary for the scalar code, and code listings are outlined
Documentation of the GLAS fourth order general calculation model. Volume 3: Vectorized code for the Cyber 205
Volume 3 of a 3-volume technical memoranda which contains documentation of the GLAS fourth order genera circulation model is presented. The volume contains the CYBER 205 scalar and vector codes of the model, list of variables, and cross references. A dictionary of FORTRAN variables used in the Scalar Version, and listings of the FORTRAN Code compiled with the C-option, are included. Cross reference maps of local variables are included for each subroutine
d-like Symmetry of the Order Parameter and Intrinsic Josephson Effects in Bi2212 Cross-Whisker Junctions
An intrinsic tunnel junction was made using two Bi-2212 single crystal
whiskers. The two whiskers with a cross-angle were overlaid at their c-planes
and connected by annealing. The angular dependence of the critical current
density along the c-axis is of the d-wave symmetry. However, the angular
dependence is much stronger than that of the conventional d-wave. Furthermore,
the current vs. voltage characteristics of the cross-whiskers junctions show a
multiple-branch structure at any cross-angle, indicating the formation of the
intrinsic Josephson junction array.Comment: 4 pages PDF fil
Magnetotransport and the upper critical magnetic field in MgB2
Magnetotransport measurements are presented on polycrystalline MgB2 samples.
The resistive upper critical magnetic field reveals a temperature dependence
with a positive curvature from Tc = 39.3 K down to about 20 K, then changes to
a slightly negative curvature reaching 25 T at 1.5 K. The 25- Tesla upper
critical field is much higher than what is known so far on polycrystals of MgB2
but it is in agreement with recent data obtained on epitaxial MgB2 films. The
deviation of Bc2(T) from standard BCS might be due to the proposed two-gap
superconductivity in this compound. The observed quadratic normal-state
magnetoresistance with validity of Kohler's rule can be ascribed to classical
trajectory effects in the low-field limit.Comment: 6 pages, incl. 3 figure
Metabolic modeling and analysis of the metabolic switch in Streptomyces coelicolor
Background
The transition from exponential to stationary phase in Streptomyces coelicolor is accompanied by a major metabolic switch and results in a strong activation of secondary metabolism. Here we have explored the underlying reorganization of the metabolome by combining computational predictions based on constraint-based modeling and detailed transcriptomics time course observations.
Results
We reconstructed the stoichiometric matrix of S. coelicolor, including the major antibiotic biosynthesis pathways, and performed flux balance analysis to predict flux changes that occur when the cell switches from biomass to antibiotic production. We defined the model input based on observed fermenter culture data and used a dynamically varying objective function to represent the metabolic switch. The predicted fluxes of many genes show highly significant correlation to the time series of the corresponding gene expression data. Individual mispredictions identify novel links between antibiotic production and primary metabolism.
Conclusion
Our results show the usefulness of constraint-based modeling for providing a detailed interpretation of time course gene expression data
Spin Gaps in Coupled t-J Ladders
Spin gaps in coupled - ladders are investigated by exact
diagonalization of small clusters up to 48 sites. At half-filling, the
numerical results for the triplet excitation spectrum are in very good
agreement with a second order perturbation expansion in term of small
inter-ladder and intra-ladder exchange couplings between rungs
(). The band of local triplet excitations moving
coherently along the ladder (with momenta close to ) is split by the
inter-ladder coupling. For intermediate couplings finite size scaling is used
to estimate the spin gap. In the isotropic infinite 4-chain system (two coupled
ladders) we find a spin gap of , roughly half of the single ladder
spin gap. When the system is hole doped, bonding and anti-bonding bound pairs
of holes can propagate coherently along the chains and the spin gap remains
finite.Comment: 11 pages, 5 figures, uuencoded form of postscript files of figures
and text, LPQTH-94/
Effect of Dy substitution in the giant magnetocaloric properties of HoB
Recently, a massive magnetocaloric effect near the liquefaction temperature
of hydrogen has been reported in the ferromagnetic material HoB. Here we
investigate the effects of Dy substitution in the magnetocaloric properties of
HoDyB alloys ( = 0, 0.3, 0.5, 0.7, 1.0). We
find that the Curie temperature () gradually increases upon
Dy substitution, while the magnitude of the magnetic entropy change || at = decreases from 0.35 to 0.15
J cm K for a field change of 5 T. Due to the presence of two
magnetic transitions in these alloys, despite the change in the peak magnitude
of ||, the refrigerant capacity () and
refrigerant cooling power () remains almost constant in all
doping range, which as large as 5.5 J cm and 7.0 J cm for a field
change of 5 T. These results imply that this series of alloys could be an
exciting candidate for magnetic refrigeration in the temperature range between
10-50 K.Comment: 19 pages, 5 figures, 2 table
Highly Confined Optical Modes in Nanoscale Metal-Dielectric Multilayers
We show that a stack of metal-dielectric nanolayers, in addition to the long-
and short-range plasmons, guides also an entire family of modes strongly
confined within the multilayer - the bulk plasmon modes. We propose the
classification scheme that reflects specific properties of these modes. We
report experimental verification of the bulk plasmon modes by measuring modal
indices in a structure made of three pairs of silica(29nm)/gold(25nm) layers.Comment: 4 pages, 4 figure
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