6,127 research outputs found
Correlation between hordatine accumulation, environmental factors and genetic diversity in wild barley (Hordeum spontaneum C. Koch) accessions from the Near East Fertile Crescent
Stress-Minimizing Orthogonal Layout of Data Flow Diagrams with Ports
We present a fundamentally different approach to orthogonal layout of data
flow diagrams with ports. This is based on extending constrained stress
majorization to cater for ports and flow layout. Because we are minimizing
stress we are able to better display global structure, as measured by several
criteria such as stress, edge-length variance, and aspect ratio. Compared to
the layered approach, our layouts tend to exhibit symmetries, and eliminate
inter-layer whitespace, making the diagrams more compact
Multiscale Kinetic Monte-Carlo for Simulating Epitaxial Growth
We present a fast Monte-Carlo algorithm for simulating epitaxial surface
growth, based on the continuous-time Monte-Carlo algorithm of Bortz, Kalos and
Lebowitz. When simulating realistic growth regimes, much computational time is
consumed by the relatively fast dynamics of the adatoms. Continuum and
continuum-discrete hybrid methods have been developed to approach this issue;
however in many situations, the density of adatoms is too low to efficiently
and accurately simulate as a continuum. To solve the problem of fast adatom
dynamics, we allow adatoms to take larger steps, effectively reducing the
number of transitions required. We achieve nearly a factor of ten speed up, for
growth at moderate temperatures and large D/F.Comment: 7 pages, 6 figures; revised text, accepted by PR
Qa-SNAREs localized to the trans-Golgi network regulate multiple transport pathways and extracellular disease resistance in plants
In all eukaryotic cells, a membrane-trafficking system connects the post-Golgi organelles, such as the trans-Golgi network (TGN), endosomes, vacuoles, and the plasma membrane. This complex network plays critical roles in several higher-order functions in multicellular organisms. The TGN, one of the important organelles for protein transport in the post-Golgi network, functions as a sorting station, where cargo proteins are directed to the appropriate post-Golgi compartments. Unlike its roles in animal and yeast cells, the TGN has also been reported to function like early endosomal compartments in plant cells. However, the physiological roles of the TGN functions in plants are not understood. Here, we report a study of the SYP4 group (SYP41, SYP42, and SYP43), which represents the plant orthologs of the Tlg2/syntaxin16 Qa-SNARE (soluble N-ethylmaleimide sensitive factor attachment protein receptor) that localizes on the TGN in yeast and animal cells. The SYP4 group regulates the secretory and vacuolar transport pathways in the post-Golgi network and maintains the morphology of the Golgi apparatus and TGN. Consistent with a secretory role, SYP4 proteins are required for extracellular resistance responses to a fungal pathogen. We also reveal a plant cell-specific higher-order role of the SYP4 group in the protection of chloroplasts from salicylic acid-dependent biotic stress
Impact of phonons on dephasing of individual excitons in deterministic quantum dot microlenses
Optimized light-matter coupling in semiconductor nanostructures is a key to
understand their optical properties and can be enabled by advanced fabrication
techniques. Using in-situ electron beam lithography combined with a
low-temperature cathodoluminescence imaging, we deterministically fabricate
microlenses above selected InAs quantum dots (QDs) achieving their efficient
coupling to the external light field. This enables to perform four-wave mixing
micro-spectroscopy of single QD excitons, revealing the exciton population and
coherence dynamics. We infer the temperature dependence of the dephasing in
order to address the impact of phonons on the decoherence of confined excitons.
The loss of the coherence over the first picoseconds is associated with the
emission of a phonon wave packet, also governing the phonon background in
photoluminescence (PL) spectra. Using theory based on the independent boson
model, we consistently explain the initial coherence decay, the zero-phonon
line fraction, and the lineshape of the phonon-assisted PL using realistic
quantum dot geometries
- …