Garlic and ginger are not like apples and oranges: Effects of mass/count information on the production of noun phrases in English

In this study a picture–word interference paradigm was used to investigate how grammatical mass/count information is processed during noun phrase production in English. Theories of lexical processing distinguish between two different types of lexical–syntactic information: variable extrinsic lexical–syntactic features, such as number (singular, plural), and fixed intrinsic lexical–syntactic properties, such as grammatical gender (e.g., masculine, feminine). Previous research using the picture–word interference paradigm has found effects of distractor lexical–syntactic congruency for grammatical gender but no congruency effects for number. We used this phenomenon to investigate whether mass/count information is processed similarly to grammatical gender. In two experiments, participants named pictures of mass or count objects using determiner noun phrases (e.g., Experiment 1 with mass and plural count nouns: “not muchmass ricemass”, “not manycount pegscount”; Experiment 2 with mass and singular count nouns: “some ricemass”, “a pegcount”), while ignoring distractors that were countability congruent or incongruent nouns. The results revealed a countability congruency effect for mass and plural count nouns in Experiment 1 and for singular count nouns, but not mass nouns in Experiment 2. This is similar to grammatical gender suggesting that countability processing is predominantly driven by a noun’s lexical–syntactic information. © 2017 The Experimental Psychology Societ

The Influence of Spatial Resolution due to Hot-Wire Sensors on Measurements in Wall-Bounded Turbulence.

Reassessment of compiled data reveal that recorded scatter in the hot-wire measured near-wall peak in viscous-scaled streamwise turbulence intensity is due in large part to the simultaneous competing effects of Reynolds number and viscous-scaled wire-length l ( lUt n, where l is the wirelength, Ut is friction velocity and n is kinematic viscosity). These competing factors can explain much of the disparity in existing literature, in particular explaining how previous studies have incorrectly concluded that the inner-scaled near-wall peak is independent of Re. We also investigate the appearance of the, so-called, ‘outerpeak’ in the broadband streamwise intensity, found by some researchers to occur within the log-region of high Reynolds number boundary layers. We show that this ‘outer-peak’ is most likely a symptom of attenuation of small-scales due to large l . Fully mapped energy spectra, obtained with two different l , are presented to demonstrate this phenomena. The spatial attenuation resulting from wires with large l effectively filters small-scale fluctuations from the recorded signal

CSIP - a Novel Photon-Counting Detector Applicable for the SPICA Far-Infrared Instrument

We describe a novel GaAs/AlGaAs double-quantum-well device for the infrared photon detection, called Charge-Sensitive Infrared Phototransistor (CSIP). The principle of CSIP detector is the photo-excitation of an intersubband transition in a QW as an charge integrating gate and the signal amplification by another QW as a channel with very high gain, which provides us with extremely high responsivity (10^4 -- 10^6 A/W). It has been demonstrated that the CSIP designed for the mid-infrared wavelength (14.7 um) has an excellent sensitivity; the noise equivalent power (NEP) of 7x10^-19 W/rHz with the quantum efficiency of ~2%. Advantages of the CSIP against the other highly sensitive detectors are, huge dynamic range of >10^6, low output impedance of 10^3 -- 10^4 Ohms, and relatively high operation temperature (>2K). We discuss possible applications of the CSIP to FIR photon detection covering 35 -- 60 um waveband, which is a gap uncovered with presently available photoconductors.Comment: To appear in Proc. Workshop "The Space Infrared Telescope for Cosmology & Astrophysics: Revealing the Origins of Planets and Galaxies". Eds. A.M. Heras, B. Swinyard, K. Isaak, and J.R. Goicoeche

The effects of shrub encroachment on arthropod communities depend on grazing history

Unsustainable grazing is a major driver of biodiversity loss worldwide. Conservation actions such as grazing exclusion are effective strategies for halting such decline. However, we still know little how the long-term impact of grazing exclusion depends on plant–animal interactions such as those between encroaching unpalatable shrubs and ground arthropods. Here, we assessed how encroaching, unpalatable shrub species (Sarcopoterium spinosum) mediates the effects of grazing exclusion on the recovery of arthropod communities. We used a large-scale, long-term (15–25 years) grazing exclusion experiment complemented with local-scale treatments that consider the presence or absence of shrubs. We found that halting overgrazing supported the recovery of biodiversity in the long-term. Notably, the impacts of shrubs on arthropod diversity vary with grazing history. Shrubs decreased arthropod abundance by three folds, affecting particularly flies, butterflies, hymenopteran, and beetles in protected areas. Yet, shrubs had positive effects on animal diversity, particularly centipedes and millipeds in grazed areas. On the one hand, shrubs may enhance biodiversity recovery in overgrazed systems; on the other hand, shrubs may be detrimental in protected areas, in the absence of grazing. Understanding how plant–animal interactions vary with historical land-use change is key for biodiversity conservation and recovery and for integrated management of agroecosystems

An Erg11 lanosterol 14-α-demethylase-Arv1 complex is required for Candida albicans virulence.

Azole resistant fungal infections remain a health problem for the immune compromised. Current therapies are limited due to rises in new resistance mechanisms. Therefore, it is important to identify new drug targets for drug discovery and novel therapeutics. Arv1 (are1 are2 required for viability 1) function is highly conserved between multiple pathogenic fungal species. Candida albicans (C. albicans) cells lacking CaArv1 are azole hypersusceptible and lack virulence. Saccharomyces cerevisiae (S. cerevisiae) Scarv1 cells are also azole hypersusceptible, a phenotype reversed by expression of CaArv1, indicating conservation in the molecular mechanism for azole susceptibility. To define the relationship between Arv1 function and azole susceptibility, we undertook a structure/function analysis of ScArv1. We identified several conserved amino acids within the ScArv1 homology domain (ScAhd) required for maintaining normal azole susceptibility. Erg11 lanosterol 14-α-demethylase is the rate-limiting enzyme in sterol biosynthesis and is the direct target of azole antifungals, so we used our ScArv1 mutants in order to explore the relationship between ScArv1 and ScErg11. Specific ScArv1 mutants ectopically expressed from a low copy plasmid were unable to restore normal azole susceptibility to Scarv1 cells and had reduced Erg11 protein levels. Erg11 protein stability depended on its ability to form a heterodimeric complex with Arv1. Complex formation was required for maintaining normal azole susceptibility. Scarv1 cells expressing orthologous CaArv1 mutants also had reduced CaErg11 levels, were unable to form a CaArv1-CaErg11 complex, and were azole hypersusceptible. Scarv1 cells expressing CaArv1 mutants unable to interact with CaErg11 could not sustain proper levels of the azole resistant CaErg11Y132F F145L protein. Caarv1/Caarv1 cells expressing CaArv1 mutants unable to interact with CaErg11 were found to lack virulence using a disseminated candidiasis mouse model. Expressing CaErg11Y132F F145L did not reverse the lack of virulence. We hypothesize that the role of Arv1 in Erg11-dependent azole resistance is to stabilize Erg11 protein level. Arv1 inhibition may represent an avenue for treating azole resistance

An Archaeological Survey of a Pipeline Right-of-way along Loop 1604 from IH-37 to the San Antonio River, Southeast Bexar County, Texas

In February 1997, the Center for Archaeological Research (CAR) of The University of Texas at San Antonio was contracted by the San Antonio Water Systems (SAWS) to conduct an intensive archaeological survey and geomorphological study along a proposed 5 .5-km water main right-of-way, from the junction of ill -3 7 and Loop 1604 to the San Antonio River in southeast Bexar County. Upon completion of a 1 DO-percent pedestrian survey, 10 backhoe trenches, and 152 shovel tests, CAR concluded that no significant cultural remains would be impacted by excavations for the proposed water main, and recommends that no further archaeological work is required prior to construction.

Double- to Single-Strand Transition Induces Forces and Motion in DNA Origami Nanostructures

The design of dynamic, reconfigurable devices is crucial for the bottom-up construction of artificial biological systems. DNA can be used as an engineering material for the de-novo design of such dynamic devices. A self-assembled DNA origami switch is presented that uses the transition from double- to single-stranded DNA and vice versa to create and annihilate an entropic force that drives a reversible conformational change inside the switch. It is distinctively demonstrated that a DNA single-strand that is extended with 0.34 nm per nucleotide - the extension this very strand has in the double-stranded configuration - exerts a contractive force on its ends leading to large-scale motion. The operation of this type of switch is demonstrated via transmission electron microscopy, DNA-PAINT super-resolution microscopy and darkfield microscopy. The work illustrates the intricate and sometimes counter-intuitive forces that act in nanoscale physical systems that operate in fluids

Proper Sterol Distribution Is Required for Candida albicans Hyphal Formation and Virulence

Candida albicans is an opportunistic fungus responsible for the majority of systemic fungal infections. Multiple factors contribute to C. albicans pathogenicity. C. albicans strains lacking CaArv1 are avirulent. Arv1 has a conserved Arv1 homology domain (AHD) that has a zinc-binding domain containing two cysteine clusters. Here, we explored the role of the CaAHD and zinc-binding motif in CaArv1-dependent virulence. Overall, we found that the CaAHD was necessary but not sufficient for cells to be virulent, whereas the zinc-binding domain was essential, as Caarv1/Caarv1 cells expressing the full-length zinc-binding domain mutants, Caarv1C3S and Caarv1C28S, were avirulent. Phenotypically, we found a direct correlation between the avirulence of Caarv1/Caarv1, Caarrv1AHD, Caarv1C3S, and Caarv1C28S cells and defects in bud site selection, septa formation and localization, and hyphal formation and elongation. Importantly, all avirulent mutant strains lacked the ability to maintain proper sterol distribution. Overall, our results have established the importance of the AHD and zinc-binding domain in fungal invasion, and have correlated an avirulent phenotype with the inability to maintain proper sterol distribution

Statistical analysis plan for the COMPARE trial: a 3-arm randomised controlled trial comparing the effectiveness of Constraint-induced Aphasia Therapy Plus and Multi-modality Aphasia Therapy to usual care in chronic post-stroke aphasia (COMPARE)

BackgroundWhile high-quality meta-analyses have confirmed the effectiveness of aphasia therapy after stroke, there is limited evidence for the comparative effectiveness of different aphasia interventions. Two commonly used interventions, Constraint-induced Aphasia Therapy Plus (CIAT Plus) and Multi-modality Aphasia Therapy (M-MAT), are hypothesised to rely on diverse underlying neural mechanisms for recovery and may be differentially responsive to aphasia severity. COMPARE is a prospective randomised open-blinded end-point trial designed to determine whether, in people with chronic post-stroke aphasia living in the community, CIAT Plus and M-MAT provide greater therapeutic benefit compared to usual care, are differentially effective according to aphasia severity, and are cost-effective. This paper details the statistical analysis plan for the COMPARE trial developed prior to data analysis.MethodsParticipants (n = 216) are randomised to one of three arms, CIAT Plus, M-MAT or usual care, and undertake therapy with a study trained speech pathologist in groups of three participants stratified by aphasia severity. Therapy occurs for 3 h blocks per day for 10 days across 2 weeks. The primary clinical outcome is aphasia severity as measured by the Western Aphasia Battery-Revised Aphasia Quotient (WAB-R-AQ) immediately post intervention. Secondary outcomes include WAB-R-AQ at 12-week follow-up, and functional communication, discourse efficiency, multimodal communication, and health-related quality of life immediately post intervention and at 12-week follow-up.ResultsLinear mixed models (LMMs) will be used to analyse differences between M-MAT and UC, and CIAT-Plus and UC on each outcome measure immediately and at 12 weeks post-intervention. The LMM for WAB-R-AQ will assess the differences in efficacy between M-MAT and CIAT-Plus. All analyses will control for baseline aphasia severity (fixed effect) and for the clustering effect of treatment groups (random effect).DiscussionThis trial will provide relative effectiveness data for two common interventions for people with chronic post-stroke aphasia, and highlight possible differential effects based on aphasia severity. Together with the health economic analysis data, the results will enable more informed personalised prescription for aphasia therapy after stroke.Trial registrationAustralian New Zealand Clinical Trials Registry: ACTRN 12615000618550 . Registered on 15 June 2016

Quantifying absolute addressability in DNA origami with molecular resolution

Self-assembled DNA nanostructures feature an unprecedented addressability with sub-nanometer precision and accuracy. This addressability relies on the ability to attach functional entities to single DNA strands in these structures. The efficiency of this attachment depends on two factors: incorporation of the strand of interest and accessibility of this strand for downstream modification. Here we use DNA-PAINT super-resolution microscopy to quantify both incorporation and accessibility of all individual strands in DNA origami with molecular resolution. We find that strand incorporation strongly correlates with the position in the structure, ranging from a minimum of 48% on the edges to a maximum of 95% in the center. Our method offers a direct feedback for the rational refinement of the design and assembly process of DNA nanostructures and provides a long sought-after quantitative explanation for efficiencies of DNA-based nanomachines