The free rigid body dynamics: generalized versus classic

In this paper we analyze the normal forms of a general quadratic Hamiltonian system defined on the dual of the Lie algebra $\mathfrak{o}(K)$ of real $K$ - skew - symmetric matrices, where $K$ is an arbitrary $3\times 3$ real symmetric matrix. A consequence of the main results is that any first-order autonomous three-dimensional differential equation possessing two independent quadratic constants of motion which admits a positive/negative definite linear combination, is affinely equivalent to the classical "relaxed" free rigid body dynamics with linear controls.Comment: 12 page

Lagrangian Reduction, the Euler--Poincar\'{e} Equations, and Semidirect Products

There is a well developed and useful theory of Hamiltonian reduction for semidirect products, which applies to examples such as the heavy top, compressible fluids and MHD, which are governed by Lie-Poisson type equations. In this paper we study the Lagrangian analogue of this process and link it with the general theory of Lagrangian reduction; that is the reduction of variational principles. These reduced variational principles are interesting in their own right since they involve constraints on the allowed variations, analogous to what one finds in the theory of nonholonomic systems with the Lagrange d'Alembert principle. In addition, the abstract theorems about circulation, what we call the Kelvin-Noether theorem, are given.Comment: To appear in the AMS Arnold Volume II, LATeX2e 30 pages, no figure

Complete integrability versus symmetry

The purpose of this article is to show that on an open and dense set, complete integrability implies the existence of symmetry

Controlled DNA compaction within chromatin: the tail-bridging effect

We study the mechanism underlying the attraction between nucleosomes, the fundamental packaging units of DNA inside the chromatin complex. We introduce a simple model of the nucleosome, the eight-tail colloid, consisting of a charged sphere with eight oppositely charged, flexible, grafted chains that represent the terminal histone tails. We demonstrate that our complexes are attracted via the formation of chain bridges and that this attraction can be tuned by changing the fraction of charged monomers on the tails. This suggests a physical mechanism of chromatin compaction where the degree of DNA condensation can be controlled via biochemical means, namely the acetylation and deacetylation of lysines in the histone tails.Comment: 4 pages, 5 figures, submitte

Derived equivalence classification of the cluster-tilted algebras of Dynkin type E

We obtain a complete derived equivalence classification of the cluster-tilted algebras of Dynkin type E. There are 67, 416, 1574 algebras in types E6, E7 and E8 which turn out to fall into 6, 14, 15 derived equivalence classes, respectively. This classification can be achieved computationally and we outline an algorithm which has been implemented to carry out this task. We also make the classification explicit by giving standard forms for each derived equivalence class as well as complete lists of the algebras contained in each class; as these lists are quite long they are provided as supplementary material to this paper. From a structural point of view the remarkable outcome of our classification is that two cluster-tilted algebras of Dynkin type E are derived equivalent if and only if their Cartan matrices represent equivalent bilinear forms over the integers which in turn happens if and only if the two algebras are connected by a sequence of "good" mutations. This is reminiscent of the derived equivalence classification of cluster-tilted algebras of Dynkin type A, but quite different from the situation in Dynkin type D where a far-reaching classification has been obtained using similar methods as in the present paper but some very subtle questions are still open.Comment: 19 pages. v4: completely rewritten version, to appear in Algebr. Represent. Theory. v3: Main theorem strengthened by including "good" mutations (cf. also arXiv:1001.4765). Minor editorial changes. v2: Third author added. Major revision. All questions left open in the earlier version by the first two authors are now settled in v2 and the derived equivalence classification is completed. arXiv admin note: some text overlap with arXiv:1012.466

Mean-Field HP Model, Designability and Alpha-Helices in Protein Structures

Analysis of the geometric properties of a mean-field HP model on a square lattice for protein structure shows that structures with large number of switch backs between surface and core sites are chosen favorably by peptides as unique ground states. Global comparison of model (binary) peptide sequences with concatenated (binary) protein sequences listed in the Protein Data Bank and the Dali Domain Dictionary indicates that the highest correlation occurs between model peptides choosing the favored structures and those portions of protein sequences containing alpha-helices.Comment: 4 pages, 2 figure

Z_2-Regge versus Standard Regge Calculus in two dimensions

We consider two versions of quantum Regge calculus. The Standard Regge Calculus where the quadratic link lengths of the simplicial manifold vary continuously and the Z_2-Regge Model where they are restricted to two possible values. The goal is to determine whether the computationally more easily accessible Z_2 model still retains the universal characteristics of standard Regge theory in two dimensions. In order to compare observables such as average curvature or Liouville field susceptibility, we use in both models the same functional integration measure, which is chosen to render the Z_2-Regge Model particularly simple. Expectation values are computed numerically and agree qualitatively for positive bare couplings. The phase transition within the Z_2-Regge Model is analyzed by mean-field theory.Comment: 21 pages, 16 ps-figures, to be published in Phys. Rev.

NASA technology utilization survey on composite materials

NASA and NASA-funded contractor contributions to the field of composite materials are surveyed. Existing and potential non-aerospace applications of the newer composite materials are emphasized. Economic factors for selection of a composite for a particular application are weight savings, performance (high strength, high elastic modulus, low coefficient of expansion, heat resistance, corrosion resistance,), longer service life, and reduced maintenance. Applications for composites in agriculture, chemical and petrochemical industries, construction, consumer goods, machinery, power generation and distribution, transportation, biomedicine, and safety are presented. With the continuing trend toward further cost reductions, composites warrant consideration in a wide range of non-aerospace applications. Composite materials discussed include filamentary reinforced materials, laminates, multiphase alloys, solid multiphase lubricants, and multiphase ceramics. New processes developed to aid in fabrication of composites are given

Optimizing the third-and-a-half post-Newtonian gravitational radiation-reaction force for numerical simulations

The gravitational radiation-reaction force acting on perfect fluids at 3.5 post-Newtonian order is cast into a form which is directly applicable to numerical simulations. Extensive use is made of metric-coefficient changes induced by functional coordinate transformations, of the continuity equation, as well as of the equations of motion. We also present an expression appropriate for numerical simulations of the radiation field causing the worked out reaction force.Comment: 22 pages to appear in Physical Review

Distinct nature of static and dynamic magnetic stripes in cuprate superconductors

We present detailed neutron scattering studies of the static and dynamic stripes in an optimally doped high-temperature superconductor, La$_2$CuO$_{4+y}$. We find that the dynamic stripes do not disperse towards the static stripes in the limit of vanishing energy transfer. We conclude that the dynamic stripes observed in neutron scattering experiments are not the Goldstone modes associated with the broken symmetry of the simultaneously observed static stripes, but rather that the signals originate from different domains in the sample. These domains may be related by structural twinning, or may be entirely different phases, where the static stripes in one phase are pinned versions of the dynamic stripes in the other. Our results explain earlier observations of unusual dispersions in underdoped La$_{2-x}$Sr$_x$CuO$_{4}$ ($x=0.07$) and La$_{2-x}$Ba$_x$CuO$_{4}$ ($x=0.095$). Our findings are relevant for all compounds exhibiting magnetic stripes, and may thus be a vital part in unveiling the nature of high temperature superconductivity