134 research outputs found
Scaling of the B and D meson spectrum in lattice QCD
We give results for the and the meson spectrum using NRQCD on the
lattice in the quenched approximation. The masses of radially and orbitally
excited states are calculated as well as -wave hyperfine and -wave fine
structure. Radially excited -states are observed for the first time. Radial
and orbital excitation energies match well to experiment, as does the
strange-non-strange -wave splitting. We compare the light and heavy quark
mass dependence of various splittings to experiment. Our -results cover a
range in lattice spacings of more than a factor of two. Our -results are
from a single lattice spacing and we compare them to numbers in the literature
from finer lattices using other methods. We see no significant dependence of
physical results on the lattice spacing.
PACS: 11.15.Ha 12.38.Gc 14.40.Lb 14.40.NdComment: 78 pages, 29 tables, 30 figures Revised version. Minor corrections to
spelling and wordin
Isolation and Comparative Transcriptome Analysis of Human Fetal and iPSC-Derived Cone Photoreceptor Cells.
Loss of cone photoreceptors, crucial for daylight vision, has the greatest impact on sight in retinal degeneration. Transplantation of stem cell-derived L/M-opsin cones, which form 90% of the human cone population, could provide a feasible therapy to restore vision. However, transcriptomic similarities between fetal and stem cell-derived cones remain to be defined, in addition to development of cone cell purification strategies. Here, we report an analysis of the human L/M-opsin cone photoreceptor transcriptome using an AAV2/9.pR2.1:GFP reporter. This led to the identification of a cone-enriched gene signature, which we used to demonstrate similar gene expression between fetal and stem cell-derived cones. We then defined a cluster of differentiation marker combination that, when used for cell sorting, significantly enriches for cone photoreceptors from the fetal retina and stem cell-derived retinal organoids, respectively. These data may facilitate more efficient isolation of human stem cell-derived cones for use in clinical transplantation studies
SYNTHESIS, IN SILICO STUDIES AND EVALUATION OF ANTIBACTERIAL ACTIVITY OF 4-SUBSTITUTED BENZYLIDENE-2-(PHENOXYMETHYL) OXAZOL-5(4H)-ONES
Objective: Arylidene-1, 3-oxazol-5-ones represent potential antibacterial agents. In the present work, a series of 4-substituted benzylidene-2- (phenoxymethyl) oxazol-5(4H)-ones were synthesized and screened for antibacterial activity against Gram-negative bacteria Escherichia coli. To explore plausible mechanisms, synthesized compounds were docked with DNA-Gyrase enzyme.
Methods: All the reactants, phenoxy acetyl chloride, acetic anhydride, sodium acetate, substituted aromatic aldehydes, and glycine were triturated in a mortar by mechanical stirring. The antibacterial potentiality of the compounds was screened against E. coli using the disk diffusion method and the activity was recorded as a zone of inhibition.
Results: Compound 2d, possessing 3, 4, 5-trimethoxy functionality on benzylidene ring exhibited the highest activity with 19 mm of the zone of inhibition which might be due to its higher interactions with DNA-Gyrase enzyme (ΔG-8.41 kcal/mol). Compounds 2a, 2b, and 2c exhibited moderate activity in the antimicrobial assay as well as in docking study indicating the positive contribution of substitution on benzylidene ring.
Conclusion: A series of 4-substituted benzylidene-2-(phenoxymethyl) oxazol-5(4H)-ones were synthesized and evaluated for antibacterial activity. Compounds 2a, 2b, and 2c displayed moderate activity whereas 2d showed maximum zone of inhibition (19 mm). The good activity of these derivatives presumed to be due to the conformational flexibility of phenoxy methylene moiety which can be well accommodated in the target binding site
Partial Oxidation of Methane to Methanol on Cobalt Oxide-Modified Hierarchical ZSM-5
Conversion of methane to more reactive compounds such as methanol has drawn attention for many years. Hierarchical ZSM-5 zeolite has been used as support of metal oxide catalyst to facilitate the partial oxidation of methane to methanol. The NaZSM-5 zeolite was synthesized hydrothermally using double-template techniques, in which tetrapropylammonium hydroxide (TPAOH) and polydiallyldiammonium chloride (PDDA) were used as primary and secondary templates, respectively. HZSM-5 was prepared through multiple NH4+ exchange of NaZSM-5 followed by calcination. Co oxide-modified ZSM-5 (Co/NaZSM-5 and Co/HZSM-5) were prepared through impregnation method. Then, the zeolites were extensively characterized using scanning electron microscope (SEM), X-ray diffraction (XRD), AAS, Fourier transform infrared (FTIR), 27Al solid-state NMR, microbalance, and surface area analysis. The catalytic test was performed in batch reactor, and the product was analyzed with GC-FID. Reaction condition and acidity of ZSM-5 as support catalyst were studied. As a result, when using Co/HZSM-5 as catalyst, percentage (%) yield of methanol was increased with longer reaction time. On the other hand, the percentage (%) yield decreased when Co/NaZSM-5 was employed. Introduction of trace amount of oxygen to the gas mixture showed different results. Furthermore, the prospect of synthesis of ZSM-5 using natural resources and using biogas are also explored
DC‐SIGN mediated internalisation of glycosylated extracellular vesicles from Schistosoma mansoni increases activation of monocyte‐derived dendritic cells
KKN REGULER: PEMANFAATAN AIR KELAPA (COCOS NUCIFERAL) UNTUK PEMBUATAN KECAP HOMEMADE DALAM PENINGKATAN PEREKONOMIAN DI DUSUN OLAS KABUPATEN SERAM BAGIAN BARAT
Kegiatan Program prioritas KKN di Dusun Olas, Kecamatan Huamual berupa pelatihan pembuatan kecap dari air kelapa sebagai pemanfaatan limbah air kelapa untuk meningkatkan nilai ekonomi masyarakat yang telah dilakukan dengan baik. Kegiatan ini dilakukan dengan dua tahapan, Tahapan pertama berupa workshop pembuatan produk kecap. Tahapan kedua, berupa pengenalan alat dan bahan yang sekaligus pembuatan kecap dari air kelapa, pembuatan kecap dilakukan langsung oleh masyrakat setempat. Masyarakat juga diberi penjelasan singkat mengenai alasan kenapa menambahkan bahan – bahan yang ada dalam membuat produk kecap dari air kelapa, sehingga masyarakat tidak hanya mengetahui cara membuat poduk kecap dari air kelapa tapi juga mengetahui manfaat atau fungsi dari bahan – bahan yang ditambahkan dalam produk kecap dari air kelapa tersebu
Impact of chronic obstructive pulmonary disease on short-term outcome in patients with ST-elevation myocardial infarction during COVID-19 pandemic: insights from the international multicenter ISACS-STEMI registry
Background: Chronic obstructive pulmonary disease (COPD) is projected to become the third cause of mortality worldwide. COPD shares several pathophysiological mechanisms with cardiovascular disease, especially atherosclerosis. However, no definite answers are available on the prognostic role of COPD in the setting of ST elevation myocardial infarction (STEMI), especially during COVID-19 pandemic, among patients undergoing primary angioplasty, that is therefore the aim of the current study. Methods: In the ISACS-STEMI COVID-19 registry we included retrospectively patients with STEMI treated with primary percutaneous coronary intervention (PCI) between March and June of 2019 and 2020 from 109 high-volume primary PCI centers in 4 continents. Results: A total of 15,686 patients were included in this analysis. Of them, 810 (5.2%) subjects had a COPD diagnosis. They were more often elderly and with a more pronounced cardiovascular risk profile. No preminent procedural dissimilarities were noticed except for a lower proportion of dual antiplatelet therapy at discharge among COPD patients (98.9% vs. 98.1%, P = 0.038). With regards to short-term fatal outcomes, both in-hospital and 30-days mortality occurred more frequently among COPD patients, similarly in pre-COVID-19 and COVID-19 era. However, after adjustment for main baseline differences, COPD did not result as independent predictor for in-hospital death (adjusted OR [95% CI] = 0.913[0.658–1.266], P = 0.585) nor for 30-days mortality (adjusted OR [95% CI] = 0.850 [0.620–1.164], P = 0.310). No significant differences were detected in terms of SARS-CoV-2 positivity between the two groups. Conclusion: This is one of the largest studies investigating characteristics and outcome of COPD patients with STEMI undergoing primary angioplasty, especially during COVID pandemic. COPD was associated with significantly higher rates of in-hospital and 30-days mortality. However, this association disappeared after adjustment for baseline characteristics. Furthermore, COPD did not significantly affect SARS-CoV-2 positivity. Trial registration number: NCT 04412655 (2nd June 2020)
Risk factors for COVID-19-related in-hospital mortality in a high HIV and tuberculosis prevalence setting in South Africa : a cohort study
BACKGROUND : The interaction between COVID-19, non-communicable diseases, and chronic infectious diseases such as HIV and tuberculosis is unclear, particularly in low-income and middle-income countries in Africa. South Africa has a national HIV prevalence of 19% among people aged 15–49 years and a tuberculosis prevalence of 0·7% in people of all ages. Using a nationally representative hospital surveillance system in South Africa, we aimed to investigate the factors associated with in-hospital mortality among patients with COVID-19. METHODS : In this cohort study, we used data submitted to DATCOV, a national active hospital surveillance system for COVID-19 hospital admissions, for patients admitted to hospital with laboratory-confirmed SARS-CoV-2 infection between March 5, 2020, and March 27, 2021. Age, sex, race or ethnicity, and comorbidities (hypertension, diabetes, chronic cardiac disease, chronic pulmonary disease and asthma, chronic renal disease, malignancy in the past 5 years, HIV, and past and current tuberculosis) were considered as risk factors for COVID-19-related in-hospital mortality. COVID-19 in-hospital mortality, the main outcome, was defined as a death related to COVID-19 that occurred during the hospital stay and excluded deaths that occurred because of other causes or after discharge from hospital; therefore, only patients with a known in-hospital outcome (died or discharged alive) were included. Chained equation multiple imputation was used to account for missing data and random-effects multivariable logistic regression models were used to assess the role of HIV status and underlying comorbidities on COVID-19 in-hospital mortality. FINDINGS : Among the 219 265 individuals admitted to hospital with laboratory-confirmed SARS-CoV-2 infection and known in-hospital outcome data, 51 037 (23·3%) died. Most commonly observed comorbidities among individuals with available data were hypertension in 61 098 (37·4%) of 163 350, diabetes in 43 885 (27·4%) of 159 932, and HIV in 13 793 (9·1%) of 151 779. Tuberculosis was reported in 5282 (3·6%) of 146 381 individuals. Increasing age was the strongest predictor of COVID-19 in-hospital mortality. Other factors associated were HIV infection (adjusted odds ratio 1·34, 95% CI 1·27–1·43), past tuberculosis (1·26, 1·15–1·38), current tuberculosis (1·42, 1·22–1·64), and both past and current tuberculosis (1·48, 1·32–1·67) compared with never tuberculosis, as well as other described risk factors for COVID-19, such as male sex; non-White race; underlying hypertension, diabetes, chronic cardiac disease, chronic renal disease, and malignancy in the past 5 years; and treatment in the public health sector. After adjusting for other factors, people with HIV not on antiretroviral therapy (ART; adjusted odds ratio 1·45, 95% CI 1·22–1·72) were more likely to die in hospital than were people with HIV on ART. Among people with HIV, the prevalence of other comorbidities was 29·2% compared with 30·8% among HIV-uninfected individuals. Increasing number of comorbidities was associated with increased COVID-19 in-hospital mortality risk in both people with HIV and HIV-uninfected individuals. INTERPRETATION : Individuals identified as being at high risk of COVID-19 in-hospital mortality (older individuals and those with chronic comorbidities and people with HIV, particularly those not on ART) would benefit from COVID-19 prevention programmes such as vaccine prioritisation as well as early referral and treatment.DATCOV, as a national surveillance system, is funded by the South African National Institute for Communicable Diseases (NICD) and the South African National Government.http://www.thelancet.com/hivam2022School of Health Systems and Public Health (SHSPH
Clinical features and outcomes of COVID-19 admissions in a population with a high prevalence of HIV and tuberculosis: a multicentre cohort study
Background
There is still a paucity of evidence on the outcomes of coronavirus disease 2019 (COVID-19) among people living with human immunodeficiency virus (PWH) and those co-infected with tuberculosis (TB), particularly in areas where these conditions are common. We describe the clinical features, laboratory findings and outcome of hospitalised PWH and human immunodeficiency virus (HIV)-uninfected COVID-19 patients as well as those co-infected with tuberculosis (TB).
Methods
We conducted a multicentre cohort study across three hospitals in Cape Town, South Africa. All adults requiring hospitalisation with confirmed COVID-19 pneumonia from March to July 2020 were analysed.
Results
PWH comprised 270 (19%) of 1434 admissions. There were 47 patients with active tuberculosis (3.3%), of whom 29 (62%) were PWH. Three-hundred and seventy-three patients (26%) died. The mortality in PWH (n = 71, 26%) and HIV-uninfected patients (n = 296, 25%) was comparable. In patients with TB, PWH had a higher mortality than HIV-uninfected patients (n = 11, 38% vs n = 3, 20%; p = 0.001). In multivariable survival analysis a higher risk of death was associated with older age (Adjusted Hazard Ratio (AHR) 1.03 95%CI 1.02–1.03, p < 0.001), male sex (AHR1.38 (95%CI 1.12–1.72, p = 0.003) and being “overweight or obese” (AHR 1.30 95%CI 1.03–1.61 p = 0.024). HIV (AHR 1.28 95%CI 0.95–1.72, p 0.11) and active TB (AHR 1.50 95%CI 0.84–2.67, p = 0.17) were not independently associated with increased risk of COVID-19 death. Risk factors for inpatient mortality in PWH included CD4 cell count < 200 cells/mm3, higher admission oxygen requirements, absolute white cell counts, neutrophil/lymphocyte ratios, C-reactive protein, and creatinine levels.
Conclusion
In a population with high prevalence of HIV and TB, being overweight/obese was associated with increased risk of mortality in COVID-19 hospital admissions, emphasising the need for public health interventions in this patient population
Design and Performance of the mDOM Mainboard for the IceCube Upgrade
About 400 mDOMs (multi-PMT Digital Optical Modules) will be deployed as part of the IceCube Upgrade Project. The mDOM’s high pressure-resistant glass sphere houses 24 PMTs, 3 cameras, 10 flasher LEDs and various sensors. The mDOM mainboard design was challenging due to the limited available volume and demanding engineering requirements, like the maximum overall power consumption, a minimum trigger threshold of 0.2 photoelectrons (PE), the dynamic range and the linearity requirements.
Another challenge was the FPGA firmware design, dealing with about 35 Gbit/s of continuous ADC data from the digitization of the 24 PMT channels, the control of a high speed dynamic buffer and the discriminator output sampling rate of about 1GSPS. High-speed sampling of each of the discriminator outputs at ~1 GSPS improves the leading-edge time resolution for the PMT waveforms. An MCU (microcontroller unit) coordinates the data taking, the data exchange with the surface and the sensor readout. Both the FPGA firmware and MCU software can be updated remotely.
After discussing the main hardware blocks and the analog frontend (AFE) design, test results will be shown, covering especially the AFE performance. Additionally, the functionality of various sensors and modules will be evaluated
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