Advanced spectroscopy-based phenotyping offers a potential solution to the ash dieback epidemic

Natural and urban forests worldwide are increasingly threatened by global change resulting from human-mediated factors, including invasions by lethal exotic pathogens. Ash dieback (ADB), incited by the alien invasive fungus Hymenoscyphus fraxineus, has caused large-scale population decline of European ash (Fraxinus excelsior) across Europe, and is threatening to functionally extirpate this tree species. Genetically controlled host resistance is a key element to ensure European ash survival and to restore this keystone species where it has been decimated. We know that a low proportion of the natural population of European ash expresses heritable, quantitative resistance that is stable across environments. To exploit this resource for breeding and restoration efforts, tools that allow for effective and efficient, rapid identification and deployment of superior genotypes are now sorely needed. Here we show that Fourier-transform infrared (FT-IR) spectroscopy of phenolic extracts from uninfected bark tissue, coupled with a model based on soft independent modelling of class analogy (SIMCA), can robustly discriminate between ADB-resistant and susceptible European ash. The model was validated with populations of European ash grown across six European countries. Our work demonstrates that this approach can efficiently advance the effort to save such fundamental forest resource in Europe and elsewhere

Genetic variation of Fraxinus excelsior half-sib families in response to ash dieback disease following simulated spring frost and summer drought treatments

Ten juvenile Fraxinus excelsior half-sib families from two Lithuanian populations have been tested in the controlled environment for their response to ash dieback disease caused by Hymenoscyphus fraxineus, detecting changes of genetic variation and heritability, as well as estimating genotype by environment (G×E) interaction and phenotypic plasticity following artificial spring frost and summer drought treatments. In 2014, a batch of 200 four-year-old ash seedlings was used for each treatment and control (no treatment). Health condition, bud flushing phenology and height were assessed for each seedling, and disease incidence and survival ratios were assessed for each family both before (at the beginning of the vegetation season) and after the treatments (at the end of the vegetation season). Disease incidence ratio increased from 0.77-0.80 up to 0.90-0.95. Tree mortality rates during one vegetation season were significantly lower in the frost treatment (21%) than in the drought treatment (25%) or control (31%). None of the tested F. excelsior families were completely resistant to ash dieback, although significant among-family differences in disease incidence and damage rates suggest an additive mode of gene action and thus a quantitative resistance to the disease. Neither disease incidence rates, nor tree health condition scores differed significantly among the applied treatments (including control) indicating in general a negligible effect of the simulated adverse conditions on health status of the ash seedlings. However, G×E interaction was found to be significant (at P > 0.05) for disease incidence, length of necrotic shoots and tree survival, implying that susceptibility of ash families to the dieback disease unequally depends on environmental conditions, and indicating a presence of genetic variation in plasticity and reaction norms of the tested families across environments (treatments). Substantially increased coefficients of additive genetic variation and heritability in health condition following both frost and drought treatments and compared to control showed that simulated stress conditions may noticeably contribute to expression of differences among the tested F. excelsior families in their resistance traits, thus enabling a better evaluation of performance of different families, an effective family selection for resistance, and achievement of a marked genetic gain

Response of juvenile progeny of seven forest tree species and their populations to simulated climate change-related stressors, heat, elevated humidity and drought

The study aimed to evaluate response and phenotypic plasticity of juvenile progeny of seven forest tree species Pinus sylvestris, Picea abies, Quercus robur, Fraxinus excelsior, Alnus glutinosa, Betula pendula and Populus tremula and their populations to climate change-related stressors, simulated in a phytotron - heat and elevated humidity and heat and drought - in comparison to performance in ambient (control) conditions. Treatment effect on sapling morphometric, physiological and biochemical traits was significant except for health condition, transpiration and photosynthetic rates and water use efficiency (WUE). Species effect and species-by-treatment interaction were strongly significant in most traits studied, indicating a great inter-specific variability of responses to the applied treatments. Compared to control, stem diameter increment was lower for most species following both hot-wet and hot-dry treatments, while treatment impact on height increment was less pronounced and sometimes even positive. Drought caused significant defoliation in P. tremula, A. glutinosa and B. pendula, while under hot-wet treatment the defoliation in most species was lower than in control. Following hot dry treatment, WUE in P. abies, P. sylvestris and B. pendula was lower than following both hot-wet treatment and control, while in P. tremula, A. glutinosa and Q. robur WUE was higher. This suggests that the latter species are able to maintain a balance between photosynthesis and transpiration. Photosynthetic rate was highest in P. tremula, B. pendula and A. glutinosa, however it was much more negatively affected by water deficit in these three species than in other tested species. In most cases, drought had a negative effect on production of pigments in deciduous tree species, which, together with increased amounts of malondialdehyde and hydrogen peroxide, indicated a presence of an oxidative stress. Significant population effect and population-by-treatment interactions found for most traits showed different plasticity and response of tree populations to the treatments. Although, only 19% of the populations showed significant ecovalencies. Some of the observed reactions may not be considered as adaptive acclimation as decreasing growth of some species and populations indicates deteriorating performance which may lead to changes in their competitiveness, thus compromising regeneration, persistence of natural successions and sustainability of forest ecosystems