Additional file 2: of Hostplant change and paleoclimatic events explain diversification shifts in skipper butterflies (Family: Hesperiidae)

The hesperiid time tree. (PDF 4563 kb

Location and sampling details of field-collected butterflies

This file contains detailed location information and sample numbers of the six wild Bicyclus anynana populations of the study, including location names, location coordinates, sampling date, and the number of female and male samples per population

SNP data for 49 fragments of coding DNA in 31 genes sequenced for wild Bicyclus anynana populations

This file contains SNP data for 49 sequence fragments in 31 genes, for six wild Bicyclus anynana populations. Columns are: population code ('population'); population latitude ('latitude'); abbreviated gene name ('gene name'); Genbank ID ('genbank ID'); SNP position on the sequence fragment ('SNP position'); SNP type, S=synonymous, NS= non-synonymous ('SNP type'); nucleotide base of allele 1 ('allele 1'); nucleotide base of allele 2 ('allele 2'); population allele frequency for nucleotide A ('freq A'); population allele frequency for nucleotide C ('freq C'); population allele frequency for nucleotide G ('freq G'); population allele frequency for nucleotide T ('freq T'). Note that there can be several sequenced fragments per gene, and each fragment has a unique Genbank ID. For more information on the sequenced fragments and for full gene names see also Table S1 in the Supplementary Online Material of the publication. For full population names and location information see the location and sampling details file in this Dryad entry

Cox regression exploring clinical and social risk factors for death, by HIV serostatus.

<p>* Adjusted for oedema, age, sex, admission WAZ and admission MUAC.</p

Cox regression exploring main baseline predictors of death.

<p>* Adjusted for age, oedema, and HIV status.</p

FuSAM study flow chart - all admissions to MOYO.

<p>(OTP = ‘Outpatient Treatment Programme’ – the outpatient part of treatment; T/F = transfer out to different programme). ‘Still sick’ children were seen or reported to be clinically unwell at follow-up but details were not always known.</p

Patient profile at baseline (initial admission), by final outcome.

†<p>Numbers with kwashiorkor plus numbers with severe wasting = 972 rather than 1024: the remaining 52 patients had complicated moderate wasting. These children were treated according to exactly the same protocols as those with SAM and hence are included in the follow-up study.</p

ConcatanatedBAC_Orange_CTDcontig71.fasta

Masked reference file for bam fil