399 research outputs found
A Two-Study Comparison of Clinical and MRI Markers of Transition from Mild Cognitive Impairment to Alzheimer's Disease
A published predictor model in a single-site cohort study (questionable dementia, QD) that contained episodic verbal memory (SRT total recall), informant report of function (FAQ), and MRI measures was tested using logistic regression and ROC analyses with comparable measures in a second multisite cohort study (Alzheimer's Disease Neuroimaging Initiative, ADNI). There were 126 patients in QD and 282 patients in ADNI with MCI followed for 3 years. Within each sample, the differences in AUCs between the statistical models were very similar. Adding hippocampal and entorhinal cortex volumes to the model containing AVLT/SRT, FAQ, age and MMSE increased the area under the curve (AUC) in ADNI but not QD, with sensitivity increasing by 2% in ADNI and 2% in QD for a fixed specificity of 80%. Conversely, adding episodic verbal memory (SRT/AVLT) and FAQ to the model containing age, Mini Mental State Exam (MMSE), hippocampal and entorhinal cortex volumes increased the AUC in ADNI and QD, with sensitivity increasing by 17% in ADNI and 10% in QD for 80% specificity. The predictor models showed similar differences from each other in both studies, supporting independent validation. MRI hippocampal and entorhinal cortex volumes showed limited added predictive utility to memory and function measures
Enhancement of cellulosome-mediated deconstruction of cellulose by improving enzyme thermostability
Background:
The concerted action of three complementary cellulases from Clostridium thermocellum, engineered to be stable at elevated temperatures, was examined on a cellulosic substrate and compared to that of the wild-type enzymes. Exoglucanase Cel48S and endoglucanase Cel8A, both key elements of the natural cellulosome from this bacterium, were engineered previously for increased thermostability, either by SCHEMA, a structure-guided, site-directed protein recombination method, or by consensus-guided mutagenesis combined with random mutagenesis using error-prone PCR, respectively. A thermostable β-glucosidase BglA mutant was also selected from a library generated by error-prone PCR that will assist the two cellulases in their methodic deconstruction of crystalline cellulose. The effects of a thermostable scaffoldin versus those of a largely mesophilic scaffoldin were also examined. By improving the stability of the enzyme subunits and the structural component, we aimed to improve cellulosome-mediated deconstruction of cellulosic substrates.
Results:
The results demonstrate that the combination of thermostable enzymes as free enzymes and a thermostable scaffoldin was more active on the cellulosic substrate than the wild-type enzymes. Significantly, “thermostable” designer cellulosomes exhibited a 1.7-fold enhancement in cellulose degradation compared to the action of conventional designer cellulosomes that contain the respective wild-type enzymes. For designer cellulosome formats, the use of the thermostabilized scaffoldin proved critical for enhanced enzymatic performance under conditions of high temperatures.
Conclusions:
Simple improvement in the activity of a given enzyme does not guarantee its suitability for use in an enzyme cocktail or as a designer cellulosome component. The true merit of improvement resides in its ultimate contribution to synergistic action, which can only be determined experimentally. The relevance of the mutated thermostable enzymes employed in this study as components in multienzyme systems has thus been confirmed using designer cellulosome technology. Enzyme integration via a thermostable scaffoldin is critical to the ultimate stability of the complex at higher temperatures. Engineering of thermostable cellulases and additional lignocellulosic enzymes may prove a determinant parameter for development of state-of-the-art designer cellulosomes for their employment in the conversion of cellulosic biomass to soluble sugars
Chandra Detection of a TypeII Quasar at z=3.288
We report on observations of a TypeII quasar at redshift z=3.288, identified
as a hard X-ray source in a 185 ks observation with the Chandra X-ray
Observatory and as a high-redshift photometric candidate from deep, multiband
optical imaging. CXOJ084837.9+445352 (hereinafter CXO52) shows an unusually
hard X-ray spectrum from which we infer an absorbing column density N(H) =
(4.8+/-2.1)e23 / cm2 (90% confidence) and an implied unabsorbed 2-10 keV
rest-frame luminosity of L(2-10) = 3.3e44 ergs/s, well within the quasar
regime. Hubble Space Telescope imaging shows CXO52 to be elongated with slight
morphological differences between the WFPC2 F814W and NICMOS F160W bands.
Optical and near-infrared spectroscopy of CXO52 show high-ionization emission
lines with velocity widths ~1000 km/s and flux ratios similar to a Seyfert2
galaxy or radio galaxy. The latter are the only class of high-redshift TypeII
luminous AGN which have been extensively studied to date. Unlike radio
galaxies, however, CXO52 is radio quiet, remaining undetected at radio
wavelengths to fairly deep limits, f(4.8GHz) < 40 microJy. High-redshift TypeII
quasars, expected from unification models of active galaxies and long-thought
necessary to explain the X-ray background, are poorly constrained
observationally with few such systems known. We discuss recent observations of
similar TypeII quasars and detail search techniques for such systems: namely
(1) X-ray selection, (2) radio selection, (3) multi-color imaging selection,
and (4) narrow-band imaging selection. Such studies are likely to begin
identifying luminous, high-redshift TypeII systems in large numbers. We discuss
the prospects for these studies and their implications to our understanding of
the X-ray background.Comment: 28 pages, 5 figures; to appear in The Astrophysical Journa
A panchromatic study of BLAST counterparts: total star-formation rate, morphology, AGN fraction and stellar mass
We carry out a multi-wavelength study of individual galaxies detected by the
Balloon-borne Large Aperture Submillimeter Telescope (BLAST) and identified at
other wavelengths, using data spanning the radio to the ultraviolet (UV). We
develop a Monte Carlo method to account for flux boosting, source blending, and
correlations among bands, which we use to derive deboosted far-infrared (FIR)
luminosities for our sample. We estimate total star-formation rates for BLAST
counterparts with z < 0.9 by combining their FIR and UV luminosities. Star
formation is heavily obscured at L_FIR > 10^11 L_sun, z > 0.5, but the
contribution from unobscured starlight cannot be neglected at L_FIR < 10^11
L_sun, z < 0.25. We assess that about 20% of the galaxies in our sample show
indication of a type-1 active galactic nucleus (AGN), but their submillimeter
emission is mainly due to star formation in the host galaxy. We compute stellar
masses for a subset of 92 BLAST counterparts; these are relatively massive
objects, with a median mass of ~10^11 M_sun, which seem to link the 24um and
SCUBA populations, in terms of both stellar mass and star-formation activity.
The bulk of the BLAST counterparts at z<1 appear to be run-of-the-mill
star-forming galaxies, typically spiral in shape, with intermediate stellar
masses and practically constant specific star-formation rates. On the other
hand, the high-z tail of the BLAST counterparts significantly overlaps with the
SCUBA population, in terms of both star-formation rates and stellar masses,
with observed trends of specific star-formation rate that support strong
evolution and downsizing.Comment: Accepted for publication in the Astrophysical Journal. 44 pages, 11
figures. The SED template for the derivation of L_FIR has changed (added new
figure) and the discussion on the stellar masses has been improved. The
complete set of full-color postage-stamps can be found at
http://blastexperiment.info/results_images/moncelsi
Enhancement of cellulosome-mediated deconstruction of cellulose by improving enzyme thermostability
Background:
The concerted action of three complementary cellulases from Clostridium thermocellum, engineered to be stable at elevated temperatures, was examined on a cellulosic substrate and compared to that of the wild-type enzymes. Exoglucanase Cel48S and endoglucanase Cel8A, both key elements of the natural cellulosome from this bacterium, were engineered previously for increased thermostability, either by SCHEMA, a structure-guided, site-directed protein recombination method, or by consensus-guided mutagenesis combined with random mutagenesis using error-prone PCR, respectively. A thermostable β-glucosidase BglA mutant was also selected from a library generated by error-prone PCR that will assist the two cellulases in their methodic deconstruction of crystalline cellulose. The effects of a thermostable scaffoldin versus those of a largely mesophilic scaffoldin were also examined. By improving the stability of the enzyme subunits and the structural component, we aimed to improve cellulosome-mediated deconstruction of cellulosic substrates.
Results:
The results demonstrate that the combination of thermostable enzymes as free enzymes and a thermostable scaffoldin was more active on the cellulosic substrate than the wild-type enzymes. Significantly, “thermostable” designer cellulosomes exhibited a 1.7-fold enhancement in cellulose degradation compared to the action of conventional designer cellulosomes that contain the respective wild-type enzymes. For designer cellulosome formats, the use of the thermostabilized scaffoldin proved critical for enhanced enzymatic performance under conditions of high temperatures.
Conclusions:
Simple improvement in the activity of a given enzyme does not guarantee its suitability for use in an enzyme cocktail or as a designer cellulosome component. The true merit of improvement resides in its ultimate contribution to synergistic action, which can only be determined experimentally. The relevance of the mutated thermostable enzymes employed in this study as components in multienzyme systems has thus been confirmed using designer cellulosome technology. Enzyme integration via a thermostable scaffoldin is critical to the ultimate stability of the complex at higher temperatures. Engineering of thermostable cellulases and additional lignocellulosic enzymes may prove a determinant parameter for development of state-of-the-art designer cellulosomes for their employment in the conversion of cellulosic biomass to soluble sugars
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Odor Identification Impairment and Change with Cholinesterase Inhibitor Treatment in Mild Cognitive Impairment
Background: Anticholinergic challenge can induce odor identification impairment that indicates Alzheimer’s disease (AD) pathology, and short-term change in odor identification impairment with cholinesterase inhibitor (CheI) treatment may predict longer term cognitive outcomes. Objective: In patients with mild cognitive impairment (MCI) treated prospectively with donepezil, a CheI, for 52 weeks, to determine if 1) acute decline in odor identification ability with anticholinergic challenge can predict cognitive improvement, and 2) change in odor identification over 8 weeks can predict cognitive improvement. Methods: MCI was diagnosed clinically without AD biomarkers. At baseline, the University of Pennsylvania Smell identification Test (UPSIT) was administered before and after an anticholinergic atropine nasal spray challenge. Donepezil was started at 5 mg daily, increased to 10 mg daily if tolerated, and this dose was maintained for 52 weeks. Main outcomes were ADAS-Cog total score and Selective Reminding Test (SRT) total immediate recall score measured at baseline, 26 and 52 weeks. Results: In 100 study participants, mean age 70.14 (SD 9.35) years, atropine-induced decrease in UPSIT score at baseline was not associated with change in ADAS-Cog or SRT scores over 52 weeks. Change in UPSIT score from 0 to 8 weeks did not show a significant association with change in the ADAS-Cog or SRT measures over 52 weeks. Conclusion: These negative findings in a relatively large sample of patients with MCI did not replicate results in much smaller samples. Change in odor identification with anticholinergic challenge, and over 8 weeks, may not be useful predictors of cognitive improvement with CheI in patients with MCI
The Size Evolution of High Redshift Galaxies
Hubble Space Telescope images of high-redshift galaxies selected via color
and photometric redshifts are used to examine the size and axial-ratio
distribution of galaxies as a function of redshift at lookback times t > 8 Gyr.
These parameters are measured at rest-frame UV wavelengths (1200-2000
Angstroms) on images with a rest-frame resolution of less than 0.8 kpc. Galaxy
radii are found to scale with redshift approximately as the inverse of the
Hubble parameter H(z). This is in accord with the theoretical expectation that
the typical sizes of the luminous parts of galaxies should track the expected
evolution in the virial radius of dark-matter halos. The mean ratio of
semi-major to semi-minor axis for a bright well-resolved sample of galaxies at
z ~ 4 is b/a = 0.65, suggesting that these Lyman break galaxies are not drawn
from a spheroidal population. However the median concentration index of this
sample is C = 3.5, which is closer to the typical concentration indices, C ~ 4,
of nearby elliptical galaxies than to the values, C<2 for local disk galaxies
of type Sb and later.Comment: 5 pages, including 3 figures; uses emulateapj style; accepted by ApJL
for publication in a special issue of early GOODS result
Clustering of the IR Background Light with Spitzer: Contribution from Resolved Sources
We describe the angular power spectrum of resolved sources at 3.6 microns
(L-band) in Spitzer imaging data of the GOODS HDF-N, the GOODS CDF-S, and the
NDWFS Bootes field in several source magnitude bins. We also measure angular
power spectra of resolved sources in the Bootes field at K_S and J-bands using
ground-based IR imaging data. In the three bands, J, K_S, and L, we detect the
clustering of galaxies on top of the shot-noise power spectrum at multipoles
between ell ~ 10^2 and 10^5. The angular power spectra range from the large,
linear scales to small, non-linear scales of galaxy clustering, and in some
magnitude ranges, show departure from a power-law clustering spectrum. We
consider a halo model to describe clustering measurements and to establish the
halo occup ation number parameters of IR bright galaxies at redshifts around
one. We also extend our clustering results and completeness-corrected faint
source number counts in GOODS fields to understand the underlying nature of
unresolved sources responsible for IR background (IRB) anisotropies that were
detected in deep Spitzer images. While these unresolved fluctuations were
measured at sub-arcminute angular scales, if a high-redshift diffuse component
associated with first galaxies exists in the IRB, then it's clustering
properties are best studied with shallow, wide-field images that allow a
measurement of the clustering spectrum from a few degrees to arcminute angular
scales.Comment: 12 pages, 11 figures. Accepted version in press with ApJ. Revised
version includes conditional luminosity function models for IR galaxy LFs,
counts and clustering spectra. The faint, unresolved galaxy counts in these
models can reproduce excess anisotropy fluctuations reported in
astro-ph/0511105. Conditional luminosity function code is available at
http://www.cooray.org/lumfunc.html V3: Includes all data from
astro-ph/0511105 in revised Fig.8 and minor changes to tex
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