GLMM code

R code used for GLMM analysi

Supplementary tables from Expression patterns of cryptochrome genes in avian retina suggest involvement of Cry4 in light-dependent magnetoreception (cryptochrome expression in zebra finches)

Summary of birds, primers used for qPCR and statistics

Normalized Cq values from Expression patterns of cryptochrome genes in avian retina suggest involvement of Cry4 in light-dependent magnetoreception

Normalized Cq values for all experiments are provided

Appendix B. Phylogenetic relationship (neighbor-joining) of all Haemoproteus and Plasmodium lineages found in 26 different passerine bird species.

Phylogenetic relationship (neighbor-joining) of all Haemoproteus and Plasmodium lineages found in 26 different passerine bird species

Supplementary tables from Expression patterns of cryptochrome genes in avian retina suggest involvement of Cry4 in light-dependent magnetoreception

Summary of birds, primers used for qPCR and statistics

Appendix A. Number of sampled host species, total parasite prevalence (sum of both Haemoproteus and Plasmodium infections), and number of different parasite lineages retrieved in each bird species.

Number of sampled host species, total parasite prevalence (sum of both Haemoproteus and Plasmodium infections), and number of different parasite lineages retrieved in each bird species

Appendix C. Found lineages, GenBank number, the bird species wherein the lineages were found, the country where the samples were collected, and number of infected individuals.

Found lineages, GenBank number, the bird species wherein the lineages were found, the country where the samples were collected, and number of infected individuals

Results from a General Linear Model with male expression intensity as dependent variable, and female expression intensity, chromosome type (Z or autosomal) and their interaction term as independent variables in the common whitethroat.

a<p>R² = 0.994 (Adjusted R² = 0.994).</p>b<p>Computed using alpha = 0.05.</p

Comparison of onset of breeding and clutch size in relation to breeding time between female collared flycatchers infected and uninfected with Haemosporidia parasites breeding on Swedish island of Öland.

<p>In onset of breeding graph a), thick horizontal segments represent median, the bottom and the upper edges of the boxes show first and third quartiles, whiskers demonstrate minimum and maximum values. In clutch size graph b), the slopes represent predicted values derived from model-averaged estimates based on models within ΔAICc<2. Infected and uninfected females do not differ in their onset of breeding or in their seasonal decline in clutch size.</p

Mean (±SE) gene expression intensity of autosomal and Z-linked ESTs in (A) zebra finch and (B) common whitethroat.

<p>Data for all ESTs and when divided into quartiles by mean gene expression intensity from lowest 25% to highest 25% are given. Significant differences (<i>p</i><0.05) between categories are indicated (a, b and c).</p