103 research outputs found
The synergistic integration of computational fluid dynamics and experimental fluid dynamics for ground effect aerodynamics studies
This article highlights the ‘synergistic’ use of experimental fluid dynamics (EFD) and computational fluid dynamics (CFD), where the two sets of simulations are performed concurrently and by the same researcher. In particular, examples from the area of ground effect aerodynamics are discussed, where the major facility used was also designed through a combination of CFD and EFD. Three examples are than outlined, to demonstrate the insight that can be obtained from the integration of CFD and EFD studies. The case studies are the study of dimple flow (to enhance aerodynamic performance), the analysis of a Formula-style front wing and wheel, and the study of compressible flow ground effect aerodynamics. In many instances, CFD has been used to not only provide complementary information to an experimental study, but to design the experiments. Laser-based, non-intrusive experimental techniques were used to provide an excellent complement to CFD. The large datasets found from both experimental and numerical simulations have required a new methodology to correlate the information; a new post-processing method has been developed, making use of the kriging and co-kriging estimators, to develop correlations between the often disparate data types
A summary of new predictive high frequency thermo-vibrational models in porous media
In this chapter, we consider the effect of mechanical vibration on the onset of convection in porous media. The porous media is saturated either by a pure fluid or by a binary mixture. The importance of transport model on stability diagrams are presented and discussed. The stability threshold for the Darcy-Brinkman case in the RaTc-R and kc-R diagrams are presented (where RaTc, kc and R are the critical Rayleigh number, the critical wave number and the vibration parameters respectively). It is shown that there is a significant deviation from the Darcy model. In the thermo-solutal case with the Soret effect, the influence of vibration on the reduction of multi-cellular convection is emphasized. A new analytical relation for obtaining the threshold of mono-cellular convection is derived. This relation shows how the separation factor Ψ is related to controlling parameters of the problem, Ψ = f (R, ε*, Le) when the wave number k -> 0. The importance of vibrational parameter definition is highlighted and it is shown how, by using a proper definition for vibrational parameter, we may obtain compact relationship. It is also shown how this result may be used to increase components separation
Radiogenomic Mapping of Edema/Cellular Invasion MRI-Phenotypes in Glioblastoma Multiforme
Despite recent discoveries of new molecular targets and pathways, the search for an effective therapy for Glioblastoma Multiforme (GBM) continues. A newly emerged field, radiogenomics, links gene expression profiles with MRI phenotypes. MRI-FLAIR is a noninvasive diagnostic modality and was previously found to correlate with cellular invasion in GBM. Thus, our radiogenomic screen has the potential to reveal novel molecular determinants of invasion. Here, we present the first comprehensive radiogenomic analysis using quantitative MRI volumetrics and large-scale gene- and microRNA expression profiling in GBM.Based on The Cancer Genome Atlas (TCGA), discovery and validation sets with gene, microRNA, and quantitative MR-imaging data were created. Top concordant genes and microRNAs correlated with high FLAIR volumes from both sets were further characterized by Kaplan Meier survival statistics, microRNA-gene correlation analyses, and GBM molecular subtype-specific distribution.The top upregulated gene in both the discovery (4 fold) and validation (11 fold) sets was PERIOSTIN (POSTN). The top downregulated microRNA in both sets was miR-219, which is predicted to bind to POSTN. Kaplan Meier analysis demonstrated that above median expression of POSTN resulted in significantly decreased survival and shorter time to disease progression (P<0.001). High POSTN and low miR-219 expression were significantly associated with the mesenchymal GBM subtype (P<0.0001).Here, we propose a novel diagnostic method to screen for molecular cancer subtypes and genomic correlates of cellular invasion. Our findings also have potential therapeutic significance since successful molecular inhibition of invasion will improve therapy and patient survival in GBM
Overexpression of circulating MiR-30b-5p identifies advanced breast cancer
Breast cancer (BrC) remains the leading cause of cancer-related death in women, mainly due to recurrent and/or metastatic events, entailing the need for biomarkers predictive of progression to advanced disease. MicroRNAs hold promise as noninvasive cancer biomarkers due to their inherent stability and resilience in tissues and bodily fluids. There is increasing evidence that specific microRNAs play a functional role at different steps of the metastatic cascade, behaving as signaling mediators to enable the colonization of a specific organ. Herein, we aimed to evaluate the biomarker performance of microRNAs previously reported as associated with prognosis for predicting BrC progression in liquid biopsies. Background
Breast cancer (BrC) remains the leading cause of cancer-related death in women, mainly due to recurrent and/or metastatic events, entailing the need for biomarkers predictive of progression to advanced disease. MicroRNAs hold promise as noninvasive cancer biomarkers due to their inherent stability and resilience in tissues and bodily fluids. There is increasing evidence that specific microRNAs play a functional role at different steps of the metastatic cascade, behaving as signaling mediators to enable the colonization of a specific organ. Herein, we aimed to evaluate the biomarker performance of microRNAs previously reported as associated with prognosis for predicting BrC progression in liquid biopsies.
Methods
Selected microRNAs were assessed using a quantitative reverse transcription-polymerase chain reaction in a testing cohort of formalin-fixed paraffin-embedded primary (n = 16) and metastatic BrC tissues (n = 22). Then, miR-30b-5p and miR-200b-3p were assessed in a validation cohort #1 of formalin-fixed paraffin-embedded primary (n = 82) and metastatic BrC tissues (n = 93), whereas only miR-30b-5p was validated on a validation cohort #2 of liquid biopsies from BrC patients with localized (n = 20) and advanced (n = 25) disease. ROC curve was constructed to evaluate prognostic performance.
Results
MiR-30b-5p was differentially expressed in primary tumors and paired metastatic lesions, with bone metastases displaying significantly higher miR-30b-5p expression levels, paralleling the corresponding primary tumors. Interestingly, patients with advanced disease disclosed increased circulating miR-30b-5p expression compared to patients with localized BrC.
Conclusions
MiR-30b-5p might identify BrC patients at higher risk of disease progression, thus, providing a useful clinical tool for patients’ monitoring, entailing earlier and more effective treatment. Nonetheless, validation in larger multicentric cohorts is mandatory to confirm these findings.Research Center of Portuguese
Oncology Institute of Porto (PI 74-CI-IPOP-19-2016). JL and CSG are supported
by a PhD fellowship from FCT - Fundação para a Ciência e Tecnologia (SFRH/
BD/132751/2017 and SFRH/BD/92786/2013, respectively). SS is supported by
a PhD fellowship IPO/ESTIMA-1 NORTE-01-0145-FEDER-000027. BMC is funded
by FCT-Fundação para a Ciência e a Tecnologia (IF/00601/2012
microRNA-30b inhibits cell invasion and migration through targeting collagen triple helix repeat containing 1 in non-small cell lung cancer
Comparative constructions of similarity in Northern Samoyedic languages
The purpose of this paper is to analyze the suffixes which are used in Northern Samoyedic languages to build comparative constructions of equality. Depending on the language, the suffixes may perform three functions: word-building, form-building, and inflectional. When they mark the noun, they serve as simulative suffixes and are employed to build object comparison. In the inflectional function, these suffixes mark the verb and are a means of constructing situational comparison. In this case, they signal the formation of a special mood termed the Approximative. This paper provides a detailed description of the Approximative from paradigmatic and syntagmatic perspectives
MicroRNA-30d promotes angiogenesis and tumor growth via MYPT1/c-JUN/VEGFA pathway and predicts aggressive outcome in prostate cancer
Discussion: “Air and Water Studies on a Diffuser-Modified Flow Nozzle” (Benedict, R. P., Gleed, A. R., and Schulte, R. D., 1973, ASME J. Fluids Eng., 95, pp. 169–177)
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