Bacteriocins of Lactic Acid Bacteria as Potent Antimicrobial Peptides against Food Pathogens

An ever-growing demand for food products with minimal chemical additives has generated a necessity for exploring new alternatives for food preservation. In this context, more recently, bacteriocins, the peptides having antimicrobial property, synthesized ribosomally by numerous bacteria have been attracting a lot of attention. They are known to possess the potential to restrict the growth of microorganisms causing food spoilage without causing any harm to the bacteria themselves owing to the presence of self-defensive proteins. In particular, the bacteriocins of lactic acid bacteria have been considered harmless and safe for consumption and are indicated to evade the development of unwanted bacteria. Use of bacteriocins as biopreservatives has been studied in various food industries, and they have been established to elevate the shelf life of minimally processed food items by exerting killing mechanism. They restrict the growth of undesirable bacteria by breaking the target cell membrane and finally resulting into pore formation. The current article provides an insight on bacteriocins of lactic acid bacteria, their biosynthesis, mechanism of action, and promising applications of these antimicrobial peptides in the food sector

Agro-industrial byproducts as alternate cost-effective medium components for production of polyhydroxybutyrate

631-642Polyhydroxybutyrates (PHBs), biodegradable plastics, having properties similar to conventional plastics, exhibit a high potential for replacing petrochemical-based non-degradable plastics. But a major obstacle in their large-scale commercial production is high production cost, one of the key factors responsible for which is the expensive carbon sources that are currently being used in their manufacturing process. The present work was aimed to study PHB production using cost-effective substrates as carbon sources in the production medium. Inexpensive agro-industrial byproducts (molasses, cheese whey, wheat bran and banana peel, used in different concentrations) were explored for their potential to substitute the conventional costly substrates. Compared to glucose, all the four alternate carbon sources showed an enhancement in PHB production. The mean percent increase in PHB production was in the range of 3.81% to 7.23%. However, some of the bacterial isolates showed an enhancement as high as 23.32% and 19.65%. Highest mean PHB yield was observed in molasses (135.18 mg/mL), followed by cheese-whey (133.79 mg/mL), banana peel, and least in wheat bran based production medium. On dry weight basis, PHB accumulation in cells was observed to be 64.32% and 64.29% of the total dry cell weight with molasses and cheese whey, respectively, as carbon sources. FTIR spectra of extracted PHB were found to be comparable to the spectra of standard PHB, thus, confirming the chemical nature of the extracted polymer

Agro-industrial byproducts as alternate cost-effective medium components for production of poly-β-hydroxybutyrate

Polyhydroxybutyrates (PHBs), biodegradable plastics, having properties similar to conventional plastics, exhibit a high potential for replacing petrochemical-based non-degradable plastics. But a major obstacle in their large-scale commercial production is high production cost, one of the key factors responsible for which is the expensive carbon sources that are currently being used in their manufacturing process. The present work was aimed to study PHB production using cost-effective substrates as carbon sources in the production medium. Inexpensive agro-industrial byproducts (molasses, cheese whey, wheat bran and banana peel, used in different concentrations) were explored for their potential to substitute the conventional costly substrates. Compared to glucose, all the four alternate carbon sources showed an enhancement in PHB production. The mean percent increase in PHB production was in the range of 3.81% to 7.23%. However, some of the bacterial isolates showed an enhancement as high as 23.32% and 19.65%. Highest mean PHB yield was observed in molasses (135.18 mg/mL), followed by cheese-whey (133.79 mg/mL), banana peel, and least in wheat bran based production medium. On dry weight basis, PHB accumulation in cells was observed to be 64.32% and 64.29% of the total dry cell weight with molasses and cheese whey, respectively, as carbon sources. FTIR spectra of extracted PHB were found to be comparable to the spectra of standard PHB, thus, confirming the chemical nature of the extracted polymer

Genome-wide identification and characterization of flowering genes in Citrus sinensis (L.) Osbeck: a comparison among C. Medica L., C. Reticulata Blanco, C. Grandis (L.) Osbeck and C. Clementina

Abstract Background Flowering plays an important role in completing the reproductive cycle of plants and obtaining next generation of plants. In case of citrus, it may take more than a year to achieve progeny. Therefore, in order to fasten the breeding processes, the juvenility period needs to be reduced. The juvenility in plants is regulated by set of various flowering genes. The citrus fruit and leaves possess various medicinal properties and are subjected to intensive breeding programs to produce hybrids with improved quality traits. In order to break juvenility in Citrus, it is important to study the role of flowering genes. The present study involved identification of genes regulating flowering in Citrus sinensis L. Osbeck via homology based approach. The structural and functional characterization of these genes would help in targeting genome editing techniques to induce mutations in these genes for producing desirable results. Results A total of 43 genes were identified which were located on all the 9 chromosomes of citrus. The in-silico analysis was performed to determine the genetic structure, conserved motifs, cis-regulatory elements (CREs) and phylogenetic relationship of the genes. A total of 10 CREs responsible for flowering were detected in 33 genes and 8 conserved motifs were identified in all the genes. The protein structure, protein-protein interaction network and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis was performed to study the functioning of these genes which revealed the involvement of flowering proteins in circadian rhythm pathways. The gene ontology (GO) and gene function analysis was performed to functionally annotate the genes. The structure of the genes and proteins were also compared among other Citrus species to study the evolutionary relationship among them. The expression study revealed the expression of flowering genes in floral buds and ovaries. The qRT-PCR analysis revealed that the flowering genes were highly expressed in bud stage, fully grown flower and early stage of fruit development. Conclusions The findings suggested that the flowering genes were highly conserved in citrus species. The qRT-PCR analysis revealed the tissue specific expression of flowering genes (CsFT, CsCO, CsSOC, CsAP, CsSEP and CsLFY) which would help in easy detection and targeting of genes through various forward and reverse genetic approaches

Comprehensive genome-wide identification and transferability of chromosome-specific highly variable microsatellite markers from citrus species

Abstract Citrus species among the most important and widely consumed fruit in the world due to Vitamin C, essential oil glands, and flavonoids. Highly variable simple sequence repeats (SSR) markers are one of the most informative and versatile molecular markers used in perennial tree genetic research. SSR survey of Citrus sinensis and Citrus maxima were identified perfect SSRs spanning nine chromosomes. Furthermore, we categorized all SSR motifs into three major classes based on their tract lengths. We designed and validated a class I SSRs in the C. sinensis and C. maxima genome through electronic polymerase chain reaction (ePCR) and found 83.89% in C. sinensis and 78.52% in C. maxima SSRs producing a single amplicon. Then, we selected extremely variable SSRs (> 40 nt) from the ePCR-verified class I SSRs and in silico validated across seven draft genomes of citrus, which provided us a subset of 84.74% in C. sinensis and 77.53% in C. maxima highly polymorphic SSRs. Out of these, 129 primers were validated on 24 citrus genotypes through wet-lab experiment. We found 127 (98.45%) polymorphic HvSSRs on 24 genotypes. The utility of the developed HvSSRs was demonstrated by analysing genetic diversity of 181 citrus genotypes using 17 HvSSRs spanning nine citrus chromosomes and were divided into 11 main groups through 17 HvSSRs. These chromosome-specific SSRs will serve as a powerful genomic tool used for future QTL mapping, molecular breeding, investigation of population genetic diversity, comparative mapping, and evolutionary studies among citrus and other relative genera/species

Initial invasive or conservative strategy for stable coronary disease

BACKGROUND Among patients with stable coronary disease and moderate or severe ischemia, whether clinical outcomes are better in those who receive an invasive intervention plus medical therapy than in those who receive medical therapy alone is uncertain. METHODS We randomly assigned 5179 patients with moderate or severe ischemia to an initial invasive strategy (angiography and revascularization when feasible) and medical therapy or to an initial conservative strategy of medical therapy alone and angiography if medical therapy failed. The primary outcome was a composite of death from cardiovascular causes, myocardial infarction, or hospitalization for unstable angina, heart failure, or resuscitated cardiac arrest. A key secondary outcome was death from cardiovascular causes or myocardial infarction. RESULTS Over a median of 3.2 years, 318 primary outcome events occurred in the invasive-strategy group and 352 occurred in the conservative-strategy group. At 6 months, the cumulative event rate was 5.3% in the invasive-strategy group and 3.4% in the conservative-strategy group (difference, 1.9 percentage points; 95% confidence interval [CI], 0.8 to 3.0); at 5 years, the cumulative event rate was 16.4% and 18.2%, respectively (difference, 121.8 percentage points; 95% CI, 124.7 to 1.0). Results were similar with respect to the key secondary outcome. The incidence of the primary outcome was sensitive to the definition of myocardial infarction; a secondary analysis yielded more procedural myocardial infarctions of uncertain clinical importance. There were 145 deaths in the invasive-strategy group and 144 deaths in the conservative-strategy group (hazard ratio, 1.05; 95% CI, 0.83 to 1.32). CONCLUSIONS Among patients with stable coronary disease and moderate or severe ischemia, we did not find evidence that an initial invasive strategy, as compared with an initial conservative strategy, reduced the risk of ischemic cardiovascular events or death from any cause over a median of 3.2 years. The trial findings were sensitive to the definition of myocardial infarction that was used