52 research outputs found
Anion Formation of 4‘-(Dimethylamino)-3-hydroxyflavone in Phosphatidylglycerol Vesicles Induced by HEPES Buffer: A Steady-State and Time-Resolved Fluorescence Investigation
Sensing peptide–oligonucleotide interactions by a two-color fluorescence label: application to the HIV-1 nucleocapsid protein
We present a new methodology for site-specific sensing of peptide–oligonucleotide (ODN) interactions using a solvatochromic fluorescent label based on 3-hydroxychromone (3HC). This label was covalently attached to the N-terminus of a peptide corresponding to the zinc finger domain of the HIV-1 nucleocapsid protein (NC). On interaction with target ODNs, the labeled peptide shows strong changes in the ratio of its two emission bands, indicating an enhanced screening of the 3HC fluorophore from the bulk water by the ODN bases. Remarkably, this two-color response depends on the ODN sequence and correlates with the 3D structure of the corresponding complexes, suggesting that the 3HC label monitors the peptide–ODN interactions site-specifically. By measuring the two-color ratio, we were also able to determine the peptide–ODN-binding parameters and distinguish multiple binding sites in ODNs, which is rather difficult using other fluorescence methods. Moreover, this method was found to be more sensitive than the commonly used steady-state fluorescence anisotropy, especially in the case of small ODNs. The described methodology could become a new universal tool for investigating peptide–ODN interactions
Visualization and detection of live and apoptotic cells with fluorescent carbon nanoparticles
Dynamics of Intermolecular Hydrogen Bonds in the Excited States of 4‘-Dialkylamino-3-hydroxyflavones. On the Pathway to an Ideal Fluorescent Hydrogen Bonding Sensor
Picosecond Time-Resolved Fluorescence Studies Are Consistent with Reversible Excited-State Intramolecular Proton Transfer in 4‘-(Dialkylamino)-3-hydroxyflavones
Studying reactions that proceed from highest excited states of molecules using fluorescence quenching
Effect of temperature and dynamic fluorescence quenching on proton transfer in 3-hydroxyflavone
- …