Development and characterisation of novel microsatellite loci for the baldchin groper (Choerodon rubescens) and cross-amplification in seven other labrid species

We describe the development and characterisation of novel microsatellite loci for the baldchin groper, Choerodon rubescens. The purpose was to identify loci that can be used to resolve uncertainties about the population (stock) structure of this fish species, which is endemic to a narrow region of the west coast of Australia and showing evidence of overfishing in some locations. Of 22 loci characterised, 12 appear to be ideally suited for population-level analyses. Utilising data obtained from four sampling locations across the distribution of C. rubescens, the total number of alleles observed at each of the 12 loci ranged from 2 to 24, while the overall values of expected heterozygosity ranged from 0.19 to 0.89. Cross-amplification of the 12 loci in seven other labrid species was often successful, especially in congeners

European REE resources: alkaline magmatism and beyond

Europe has resources of many of the critical metals, pa rticularly the rare earth el ements (REE); yet economic, environmental and accessibility issues have combined to slow progress toward the explo itation of these resources. The EURARE project, funded by the EU’s Seventh Framework programme, brings together a number of partners from across Europe to assess Europe’s REE resources and to se t the basis for an European REE industry. This talk will describe new research on some of the wide range of potential REE resources within Europe and showcase the diversity of resources available

Molecular beam epitaxy of highly mismatched N-rich GaNSb and InNAs alloys

GaN materials alloyed with group V anions form the so-called highly mismatched alloys (HMAs). Recently, the authors succeeded in growing N-rich GaNAs and GaNBi alloys over a large composition range by plasma-assisted molecular beam epitaxy (PA-MBE). Here, they present first results on PA-MBE growth and properties of N-rich GaNSb and InNAs alloys and compare these with GaNAs and GaNBi alloys. The enhanced incorporation of As and Sb was achieved by growing the layers at extremely low growth temperatures. Although layers become amorphous for high As, Sb, and Bi content, optical absorption measurements show a progressive shift of the optical absorption edge to lower energy. The large band gap range and controllable conduction and valence band positions of these HMAs make them promising materials for efficient solar energy conversion devices

Petrogenesis of rare-metal pegmatites in high-grade metamorphic terranes: a case study from the Lewisian Gneiss Complex of north-west Scotland

Many rare metals used today are derived from granitic pegmatites, but debate continues about the origin of these rocks. It is clear that some pegmatites represent the most highly fractionated products of a parental granite body, whilst others have formed by anatexis of local crust. However, the importance of these two processes in the formation of rare-metal pegmatites is not always evident. The Lewisian Gneiss Complex of NW Scotland comprises Archaean meta-igneous gneisses which were highly reworked during accretional and collisional events in the Palaeoproterozoic (Laxfordian orogeny). Crustal thickening and subsequent decompression led to melting and the formation of abundant granitic and pegmatitic sheets in many parts of the Lewisian Gneiss Complex. This paper presents new petrological, geochemical and age data for those pegmatites and shows that, whilst the majority are barren biotite-magnetite granitic pegmatites, a few muscovite-garnet (rare-metal) pegmatites are present. These are mainly intruded into a belt of Palaeoproterozoic metasedimentary and meta-igneous rocks known as the Harris Granulite Belt. The rare-metal pegmatites are distinct in their mineralogy, containing garnet and muscovite, with local tourmaline and a range of accessory minerals including columbite and tantalite. In contrast, the biotite-magnetite pegmatites have biotite and magnetite as their main mafic components. The rare-metal pegmatites are also distinguished by their bulk-rock and mineral chemistry, including a more peraluminous character and enrichments in Rb, Li, Cs, Be, Nb and Ta. New U-Pb ages (c. 1690–1710 Ma) suggest that these rare-metal pegmatites are within the age range of nearby biotite-magnetite pegmatites, indicating that similar genetic processes could have been responsible for their formation. The peraluminous nature of the rare-metal pegmatites strongly points towards a metasedimentary source. Notably, within the Lewisian Gneiss Complex, such pegmatites are only found in areas where a metasedimentary source is available. The evidence thus points towards all the Laxfordian pegmatites being formed by a process of crustal anatexis, with the formation of rare-metal pegmatites being largely controlled by source composition rather than solely by genetic process. This is in keeping with previous studies that have also challenged the widely accepted model that all rare-metal pegmatites are formed by fractionation from a parental granite, and raises questions about the origin of other mineralised pegmatites worldwide

REE mineralisation within the Ditrău Alkaline Complex, Romania: Interplay of magmatic and hydrothermal processes

The Ditrău Igneous Complex (north-east Romania) is a tilted Mesozoic alkaline intrusion (~19 km diameter), with enrichments in rare earth elements (REE), niobium, and molybdenum. It has the potential to contribute to a secure and sustainable European REE mining industry, ensuring supply security for these critical metals. The complex comprises a sequence of ultramafic rocks, alkali gabbros, diorites, syenites, nepheline syenites and alkali granites. These units have been significantly modified by sub-solidus interaction with late-stage magmatic fluids and are cut by secondary mafic dykes. The complex was subsequently cut by REE-mineralised carbonate-rich veins. Geochemical and petrological data, including apatite mineral chemistry, from the alkaline igneous rocks, dykes and veins within the Ditrău Complex, have been used to assess the interplay of magmatic processes with late-stage magmatic and hydrothermal fluids, and the effects of these processes on element remobilisation and concentration of critical metals. Only limited critical metal enrichment was achieved by magmatic processes; the REE were preferentially incorporated into titanite and apatite in ultramafic cumulates during primary crystallisation, and were not enriched in evolved magmas. A hydrothermal system developed within the Ditrău Complex magma chamber during the later stages of magmatic crystallisation, causing localised alteration of nepheline syenites by a sodium-rich fluid. Mafic dykes subsequently acted as conduits for late stage, buoyant potassic fluids, which leached REE and HFSE from the surrounding syenitic rocks. These fluids percolated up and accumulated in the roof zone, causing the breakdown of nepheline to K-rich pseudomorphs and the precipitation of hydrothermal minerals such as zircon and pyrochlore within veins. REE mineralisation within the Ditrău Complex is hosted in the latest hydrothermal phase, mineralised carbonate-rich veins, which cross-cut the complex. Monazite is the main REE-bearing phase, it crystallised from a late REE- and carbonate-rich fluid with pH controlled REE deposition

The potential of antisense oligonucleotide therapies for inherited childhood lung diseases

Antisense oligonucleotides are an emerging therapeutic option to treat diseases with known genetic origin. In the age of personalised medicines, antisense oligonucleotides can sometimes be designed to target and bypass or overcome a patient’s genetic mutation, in particular those lesions that compromise normal pre-mRNA processing. Antisense oligonucleotides can alter gene expression through a variety of mechanisms as determined by the chemistry and antisense oligomer design. Through targeting the pre-mRNA, antisense oligonucleotides can alter splicing and induce a specific spliceoform or disrupt the reading frame, target an RNA transcript for degradation through RNaseH activation, block ribosome initiation of protein translation or disrupt miRNA function. The recent accelerated approval of eteplirsen (renamed Exondys 51™) by the Food and Drug Administration, for the treatment of Duchenne muscular dystrophy, and nusinersen, for the treatment of spinal muscular atrophy, herald a new and exciting era in splice-switching antisense oligonucleotide applications to treat inherited diseases. This review considers the potential of antisense oligonucleotides to treat inherited lung diseases of childhood with a focus on cystic fibrosis and disorders of surfactant protein metabolism

High Fidelity Simulations of Supersonic Intakes

A parametric study of Multiple Shock Wave Boundary Layer Interactions is presented in this paper. All results were obtained using the in-house CFD solver of Glasgow University. Such interactions often occur in high-speed intakes which have recently seen a renewed interest. Simulations of a multiple shock wave boundary layer interaction in a rectangular duct were first performed and the results were compared to the experiments. Using the same numerical setup a parametric study investigating the effect of Mach number, Reynolds number and confinement on the baseline solution was then performed. Efficiency metrics were also define to quantify the interactions. The results show that Reynolds-stress based turbulence models are better suited than linear models. The corner separations affect the separation at the centreline which in turn alters the structure of the initial shock and the subsequent interaction. Reduced confinement is found to be beneficial for higher pressure recovery. Finally, results for a more realistic geometry (fore-body with an intake) featuring an oblique and multiple shock wave boundary layer interactions are presented

Alpha-1 antitrypsin mitigates the inhibition of airway epithelial cell repair by neutrophil elastase

Copyright © 2016 by the American Thoracic Society. Neutrophil elastase (NE) activity is associated with many destructive lung diseases and is a predictor for structural lung damage in early cystic fibrosis (CF), which suggests normal maintenance of airway epitheliumis prevented byuninhibitedNE.However, limited data exist on how the NE activity in airways of very young children with CF affects function of the epithelia. The aimof this studywas to determine if NE activity could inhibit epithelial homeostasis and repair and whether any functional effect was reversible by antiprotease alpha-1 antitrypsin (a1AT) treatment. Viability, inflammation, apoptosis, and proliferation were assessed in healthy non-CF and CF pediatric primary airway epithelial cells (pAEC non-CF and pAEC CF , respectively) during exposure to physiologically relevant NE. The effect of NE activity on pAEC CF wound repair was also assessed.We report that viability after 48 hours was significantly decreased by 100 nM NE in pAEC non-CF and pAEC CF owing to rapid cellular detachment that was accompanied by inflammatory cytokine release. Furthermore, both phenotypes initiated an apoptotic response to 100 nM NE, whereas ≥50 nM NE activity significantly inhibited the proliferative capacity of cultures. Similar concentrations of NE also significantly inhibited wound repair of pAEC CF , but this effect was reversed by the addition of a1AT. Collectively, our results demonstrate free NE activity is deleterious for epithelial homeostasis and support the hypothesis that proteases inthe airway contribute directly toCF structural lung disease. Our results also highlight the need to investigate antiprotease therapies in early CF disease in more detail

CMAS challenges to CMC-T/EBC systems

Gas turbine technology is undergoing a major transition with the recent implementation of SiC based ceramic composites (CMCs) in aircraft engines. While the potential improvement in temperature capability (≥1500°C) is unprecedented, there are a number of issues that limit the full exploitation of such potential. In addition to the longstanding concern for low temperature oxidative embrittlement and the limited temperature capability of current bond coats and matrices, the susceptibility of the protective SiO2 to volatilization in the combustion environment requires the use of environmental barrier coatings (EBCs) to achieve durability targets. Most EBC concepts, however, are based on silicates and are thus susceptible to degradation by molten silicate deposits generically known as CMAS originating from mineral debris ingested into engines with the intake air. This presentation will discuss the thermodynamic and mechanistic foundation of the degradation of EBCs by CMAS, recent progress in establishing the relevant phase equilibria for these systems, and the role of the CMAS composition on the extent of degradation, as well as perspective on mitigation. (Research supported by ONR, AFOSR and the P&W Center of Excellence in Composites at UCSB.

A review of the mineral potential of Liberia

The Republic of Liberia in West Africa is underlain mostly by Precambrian rocks of Archaean (Liberian) age in the west and of Proterozoic (Eburnean) age in the east. By analogy with similar terranes elsewhere in the world, and in West Africa in particular, the geology of Liberia is favourable for the occurrence of deposits of a wide range of metals and industrial minerals, including gold, iron ore, diamonds, base metals, bauxite, manganese, fluorspar, kyanite and phosphate. Known gold deposits, mostly orogenic in style, occur widely and are commonly associated with north-east-trending regional shear zones. Gold mining commenced at the New Liberty deposit in western Liberia in 2015, while significant gold resources have also been identified at several other sites in both Archaean and Proterozoic terranes. Liberia has large resources of itabirite-type iron ores, most of which are located in the Liberian terrane, and was the largest producer in Africa prior to the onset of civil war in 1989. Production of iron ore is currently restricted to a single mine, Yekepa, in the Nimba Range. Other important deposits, some of them previously mined, include Bong, the Western Cluster, Putu and Goe Fantro. There is a long history of alluvial diamond production in western and central Liberia, together with more than 160 known occurrences of kimberlite. Most of the known kimberlites occur in three clusters of small pipes and abundant dykes, located at Kumgbor, Mano Godua and Weasua, close to the border with Sierra Leone. Many of these are considered to be part of a single province that includes Jurassic age diamondiferous kimberlites in Sierra Leone and Guinea. Deposits and occurrences of a wide range of other metals and industrial minerals are also known. Several of these have been worked on a small scale in the past, mainly by artisanal miners, but most are poorly known in detail with sub-surface information available at only a few localities. By comparison with most other countries in West Africa, the geology of Liberia is poorly known and there has been very little systematic exploration carried out for most commodities other than gold, iron ore and diamonds since the 1960s and 1970s. Further detailed field and laboratory investigations using modern techniques are required to properly evaluate the potential for the occurrence of economic deposits of many minerals and metals in a variety of geological settings. Digital geological, geochemical, geophysical and mineral occurrence datasets, including new national airborne geophysical survey data, provide a sound basis for the identification of new exploration targets, but in almost every part of the country there is a need for new and more detailed geological surveys to underpin mineral exploration